Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0613 Punica granatum HOM05D005736 ORTHO05D007215 4.1e-181 637.9 309 100.0
CiPaw.07G021500 Carya illinoinensis HOM05D005736 ORTHO05D007215 2.1e-153 545.8 309 83.8
Haze_04138 Corylus avellana HOM05D005736 ORTHO05D007215 3.6e-153 545.0 309 84.1
Duzib106G0969 Durio zibethinus HOM05D005736 ORTHO05D007215 3.6e-153 545.0 303 84.2
Thecc.05G313100 Theobroma cacao HOM05D005736 ORTHO05D007215 4.7e-153 544.7 303 84.2
MD12G1212900 Malus domestica HOM05D005736 ORTHO05D007215 1.8e-152 542.7 309 82.5
Hma1.2p1_1292F.1_g273760 Hydrangea macrophylla HOM05D005736 ORTHO05D007215 2.3e-152 542.3 309 82.2
Potri.013G017000 Populus trichocarpa HOM05D005736 ORTHO05D007215 3.1e-152 542.0 303 83.2
TWI36G0679 Tripterygium wilfordii HOM05D005736 ORTHO05D007215 2.0e-151 539.3 303 85.5
GSVIVG01031141001 Vitis vinifera HOM05D005736 ORTHO05D007215 2.6e-151 538.9 297 83.8
CANSAT54G0716 Cannabis sativa HOM05D005736 ORTHO05D007215 3.4e-151 538.5 309 81.9
Atru.chr2.31 Acer truncatum HOM05D005736 ORTHO05D007215 9.8e-151 537.0 303 84.8
Potri.005G025300 Populus trichocarpa HOM05D005736 ORTHO05D007215 1.3e-150 536.6 303 82.2
Sabra13G0020000 Salix brachista HOM05D005736 ORTHO05D007215 4.9e-150 534.6 303 82.5
Sabra13G0015800 Salix brachista HOM05D005736 ORTHO05D007215 1.1e-149 533.5 303 82.2
COL.COLO4_10521 Corchorus olitorius HOM05D005736 ORTHO05D007215 1.9e-149 532.7 303 82.8
TAR633G1366 Trochodendron aralioides HOM05D005736 ORTHO05D007215 3.2e-149 531.9 307 81.8
Prupe.6G320500 Prunus persica HOM05D005736 ORTHO05D007215 1.2e-148 530.0 309 80.9
CSS0016231 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 2.7e-148 528.9 309 79.3
QL03p020205 Quercus lobata HOM05D005736 ORTHO05D007215 2.7e-148 528.9 308 81.2
MD04G1200300 Malus domestica HOM05D005736 ORTHO05D007215 3.5e-148 528.5 311 80.7
CSS0007199 Camellia sinensis var. sinensis HOM05D005736 ORTHO05D007215 1.7e-147 526.2 309 79.0
Gohir.D11G277900 Gossypium hirsutum HOM05D005736 ORTHO05D007215 2.3e-147 525.8 303 80.9
Gorai.007G300100 Gossypium raimondii HOM05D005736 ORTHO05D007215 2.3e-147 525.8 303 80.9
RcHm_v2.0_Chr3g0455751 Rosa chinensis HOM05D005736 ORTHO05D007215 3.0e-147 525.4 309 80.3
Glyma.19G233300 Glycine max HOM05D005736 ORTHO05D007215 1.1e-146 523.5 309 81.6
Lj1g0012360 Lotus japonicus HOM05D005736 ORTHO05D007215 2.5e-146 522.3 309 79.9
Lalb_Chr15g0077351 Lupinus albus HOM05D005736 ORTHO05D007215 2.5e-146 522.3 309 80.3
Phvul.006G089500 Phaseolus vulgaris HOM05D005736 ORTHO05D007215 7.3e-146 520.8 309 80.3
Ciclev10001982m.g Citrus clementina HOM05D005736 ORTHO05D007215 9.5e-146 520.4 303 81.5
Gohir.A11G268000 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.2e-145 520.0 303 80.2
Cfa006630 Carpinus fangiana HOM05D005736 ORTHO05D007215 2.1e-145 519.2 309 80.9
Sc09g0002940 Simmondsia chinensis HOM05D005736 ORTHO05D007215 2.8e-145 518.8 309 78.0
Glyma.03G235500 Glycine max HOM05D005736 ORTHO05D007215 4.7e-145 518.1 309 79.6
Aqoxy5G00736 Aquilegia oxysepala HOM05D005736 ORTHO05D007215 8.0e-145 517.3 314 78.0
arahy.Tifrunner.gnm1.ann1.7HV2PX Arachis hypogaea HOM05D005736 ORTHO05D007215 8.0e-145 517.3 307 78.5
Lsat_1_v5_gn_7_69261 Lactuca sativa HOM05D005736 ORTHO05D007215 1.4e-144 516.5 309 76.7
Medtr7g112700 Medicago truncatula HOM05D005736 ORTHO05D007215 2.3e-144 515.8 309 79.3
ClCG02G015270 Citrullus lanatus HOM05D005736 ORTHO05D007215 6.8e-144 514.2 303 78.5
DCAR_003356 Daucus carota HOM05D005736 ORTHO05D007215 8.9e-144 513.8 309 76.7
PSO210G0197 Papaver somniferum HOM05D005736 ORTHO05D007215 1.2e-143 513.5 304 78.6
Cc02_g34150 Coffea canephora HOM05D005736 ORTHO05D007215 1.5e-143 513.1 307 76.9
arahy.Tifrunner.gnm1.ann1.B5Q7D5 Arachis hypogaea HOM05D005736 ORTHO05D007215 2.0e-143 512.7 308 78.2
FvH4_6g06571 Fragaria vesca HOM05D005736 ORTHO05D007215 3.4e-143 511.9 309 78.3
PSO832G2303 Papaver somniferum HOM05D005736 ORTHO05D007215 4.4e-143 511.5 304 78.3
Manes.09G170200 Manihot esculenta HOM05D005736 ORTHO05D007215 3.7e-142 508.4 305 79.0
Peaxi162Scf00037g01216 Petunia axillaris HOM05D005736 ORTHO05D007215 3.7e-142 508.4 309 76.4
EL10Ac4g09914 Beta vulgaris HOM05D005736 ORTHO05D007215 8.3e-142 507.3 310 77.7
Hund07098 Selenicereus undatus HOM05D005736 ORTHO05D007215 8.3e-142 507.3 306 76.1
HanXRQChr16g0513361 Helianthus annuus HOM05D005736 ORTHO05D007215 1.4e-141 506.5 309 75.7
Oeu043344.1 Olea europaea HOM05D005736 ORTHO05D007215 1.4e-141 506.5 307 76.2
CsaV3_2G006740 Cucumis sativus L. HOM05D005736 ORTHO05D007215 2.4e-141 505.8 303 77.6
Nitab4.5_0003844g0030 Nicotiana tabacum HOM05D005736 ORTHO05D007215 2.4e-141 505.8 310 75.2
TAR362G0909 Trochodendron aralioides HOM05D005736 ORTHO05D007215 5.4e-141 504.6 304 79.3
Ah.06g189800 Amaranthus hybridus HOM05D005736 ORTHO05D007215 2.1e-140 502.7 305 77.0
PGSC0003DMG400024712 Solanum tuberosum HOM05D005736 ORTHO05D007215 6.0e-140 501.1 310 75.5
TPR.G33191 Trifolium pratense HOM05D005736 ORTHO05D007215 6.0e-140 501.1 308 77.9
Sed0015517 Sechium edule HOM05D005736 ORTHO05D007215 1.3e-139 500.0 302 76.8
SGA_v2.0_scaffold196G40952 Striga asiatica HOM05D005736 ORTHO05D007215 1.3e-139 500.0 307 75.6
Rhsim07G0188500 Rhododendron simsii HOM05D002832 ORTHO05D008667 1.7e-139 499.6 383 64.0
CAN.G1459.12 Capsicum annuum HOM05D005736 ORTHO05D007215 5.1e-139 498.0 312 74.7
Solyc09g065950.3 Solanum lycopersicum HOM05D005736 ORTHO05D007215 5.1e-139 498.0 310 75.2
vmacro04813 Vaccinium macrocarpon HOM05D005736 ORTHO05D007215 5.1e-139 498.0 381 65.6
FAN09G2204 Fragaria x ananassa HOM05D001134 ORTHO05D007215 6.6e-139 497.7 308 77.3
Nn3g21454 Nelumbo nucifera HOM05D005736 ORTHO05D007215 6.6e-139 497.7 307 76.2
Sopen01g043240 Solanum pennellii HOM05D005736 ORTHO05D007215 1.5e-138 496.5 310 75.2
VMungo0540G0827 Vigna mungo HOM05D005736 ORTHO05D007215 1.5e-138 496.5 309 76.7
HanXRQChr10g0296691 Helianthus annuus HOM05D005736 ORTHO05D007215 1.9e-138 496.1 305 75.7
AUR62005207 Chenopodium quinoa HOM05D005736 ORTHO05D007215 2.5e-138 495.7 298 77.2
FAN05G2751 Fragaria x ananassa HOM05D001134 ORTHO05D007215 1.2e-137 493.4 308 76.6
Aa31LG5G15870 Aethionema arabicum HOM05D005736 ORTHO05D007215 2.1e-137 492.7 309 74.4
THA.LOC104818718 Tarenaya hassleriana HOM05D005736 ORTHO05D007215 8.1e-137 490.7 308 73.1
ATR0796G081 Amborella trichopoda HOM05D005736 ORTHO05D007215 1.4e-136 490.0 303 73.9
AL3G16120 Arabidopsis lyrata HOM05D005736 ORTHO05D007215 3.1e-136 488.8 310 74.5
Migut.O00559 Erythranthe guttata HOM05D005736 ORTHO05D007215 4.0e-136 488.4 307 73.0
FAN02G0934 Fragaria x ananassa HOM05D005736 ORTHO05D007215 4.0e-136 488.4 345 69.3
Gohir.A11G294600 Gossypium hirsutum HOM05D005736 ORTHO05D007215 8.9e-136 487.3 309 73.8
ECA234G1428 Erigeron canadensis HOM05D005736 ORTHO05D007215 1.2e-135 486.9 300 74.0
Migut.N02084 Erythranthe guttata HOM05D005736 ORTHO05D007215 4.4e-135 485.0 307 72.6
BraA03t12591Z Brassica rapa HOM05D005736 ORTHO05D007215 7.6e-135 484.2 308 73.4
BNapus_Darmor_BZH_scaffold_114p00020 Brassica napus HOM05D005736 ORTHO05D007215 9.9e-135 483.8 307 74.3
MSTRG.20415 Avicennia marina HOM05D005736 ORTHO05D007215 2.2e-134 482.6 307 73.0
BraSC132t45500Z Brassica rapa HOM05D005736 ORTHO05D007215 2.2e-134 482.6 307 74.3
BcaB04g19260 Brassica carinata HOM05D005736 ORTHO05D007215 2.9e-134 482.3 309 72.5
Sp3g04350 Schrenkiella parvula HOM05D005736 ORTHO05D007215 4.9e-134 481.5 310 73.5
CDE02G3291 Ceratophyllum demersum HOM05D005736 ORTHO05D007215 8.3e-134 480.7 305 75.7
Carub.0003s0481 Capsella rubella HOM05D005736 ORTHO05D007215 1.1e-133 480.3 310 73.2
FAN14G1274 Fragaria x ananassa HOM05D001134 ORTHO05D001035 4.1e-133 478.4 318 73.9
BolC3t16437H Brassica oleracea HOM05D005736 ORTHO05D007215 9.2e-133 477.2 308 71.8
AT3G05520 Arabidopsis thaliana HOM05D005736 ORTHO05D007215 1.2e-132 476.9 308 72.4
CARHR079910 Cardamine hirsuta HOM05D005736 ORTHO05D007215 1.6e-132 476.5 306 72.5
Dinv30811 Davidia involucrata HOM05D005736 ORTHO05D007215 1.6e-132 476.5 309 74.1
BcaB04g19261 Brassica carinata HOM05D005736 ORTHO05D007215 2.1e-132 476.1 309 71.8
Thhalv10021069m.g Eutrema salsugineum HOM05D005736 ORTHO05D007215 3.5e-132 475.3 315 72.4
Eucgr.H04534 Eucalyptus grandis HOM05D005736 ORTHO05D007215 6.0e-132 474.6 270 84.4
C03p41560 Brassica napus HOM05D005736 ORTHO05D007215 7.8e-132 474.2 306 72.2
A03p34170 Brassica napus HOM05D005736 ORTHO05D007215 1.0e-131 473.8 306 71.9
HPP92_002147 Vanilla planifolia HOM05D005736 ORTHO05D007215 2.3e-131 472.6 309 69.6
Gorai.007G341300 Gossypium raimondii HOM05D005736 ORTHO05D007215 1.1e-130 470.3 333 68.5
BolC1t05691H Brassica oleracea HOM05D005736 ORTHO05D007215 5.2e-128 461.5 315 70.8
MELO3C004216.2 Cucumis melo HOM05D005736 ORTHO05D007215 3.2e-125 452.2 303 71.3
Cpa.g.sc48.100 Carica papaya HOM05D005736 ORTHO05D007215 2.3e-123 446.0 305 72.8
Zm00001eb330450 Zea mays HOM05D005736 ORTHO05D007215 2.5e-122 442.6 305 66.2
Zm00001eb111300 Zea mays HOM05D005736 ORTHO05D007215 7.6e-119 431.0 305 65.6
Psat3g011440 Pisum sativum HOM05D005736 ORTHO05D007215 3.5e-116 422.2 261 76.6
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 1.4e-112 410.2 265 70.2
AUR62000762 Chenopodium quinoa HOM05D005736 ORTHO05D007215 3.1e-112 409.1 258 73.3
Gohir.D11G309300 Gossypium hirsutum HOM05D005736 ORTHO05D007215 1.8e-107 393.3 238 76.1
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 5.5e-101 371.7 305 61.0
Mapoly0002s0253 Marchantia polymorpha HOM05D005736 ORTHO05D007215 6.0e-100 368.2 302 56.3
Actinidia35560 Actinidia chinensis HOM05D002832 ORTHO05D008667 2.3e-99 366.3 266 68.0
RcHm_v2.0_Chr1g0327431 Rosa chinensis HOM05D005736 ORTHO05D007215 9.6e-98 360.9 201 83.6
Os07g0414800 Oryza sativa ssp. japonica HOM05D005736 ORTHO05D007215 3.8e-94 349.0 216 73.1
SMO196G0013 Selaginella moellendorffii HOM05D005736 ORTHO05D007215 2.5e-93 346.3 291 56.4
AagrBONN_evm.TU.Sc2ySwM_344.5036 Anthoceros agrestis HOM05D005736 ORTHO05D007215 2.7e-92 342.8 303 54.8
unitig_48.g30289 Utricularia gibba HOM05D005736 ORTHO05D007215 6.1e-92 341.7 304 57.6
BcaC09g47830 Brassica carinata HOM05D005736 ORTHO05D007215 2.9e-86 322.8 211 72.0
Nitab4.5_0018629g0010 Nicotiana tabacum HOM05D005736 ORTHO05D007215 2.5e-85 319.7 177 81.4
Sopen09g027740 Solanum pennellii HOM05D005736 ORTHO05D007215 7.9e-84 314.7 177 80.2
Lj5A420T26 Lonicera japonica HOM05D005736 ORTHO05D007215 2.2e-73 280.0 179 74.9
Pp3c10_25170 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.4e-72 277.3 237 55.7
RcHm_v2.0_Chr1g0322221 Rosa chinensis HOM05D005736 ORTHO05D007215 4.1e-72 275.8 181 75.1
RcHm_v2.0_Chr3g0465741 Rosa chinensis HOM05D005736 ORTHO05D007215 1.1e-66 257.7 143 81.8
Pp3c20_23130 Physcomitrium patens HOM05D005736 ORTHO05D007215 1.5e-58 230.7 186 59.1
BcaB05g23235 Brassica carinata HOM05D005736 ORTHO05D007215 2.2e-54 216.9 170 59.4
Actinidia16813 Actinidia chinensis HOM05D005736 ORTHO05D007215 3.2e-53 213.0 130 76.9
MBI18_g08112_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 1.8e-51 207.2 130 73.8
BcaB04g21446 Brassica carinata HOM05D005736 ORTHO05D007215 1.7e-49 200.7 131 75.6
RcHm_v2.0_Chr1g0322051 Rosa chinensis HOM05D005736 ORTHO05D007215 5.4e-48 195.7 142 66.2
Actinidia16814 Actinidia chinensis HOM05D005736 ORTHO05D007215 3.5e-47 193.0 107 83.2
MBI18_g44147_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 3.4e-42 176.4 145 61.4
Nitab4.5_0003658g0100 Nicotiana tabacum HOM05D001134 ORTHO05D001035 2.5e-37 160.2 109 69.7
RcHm_v2.0_Chr1g0322151 Rosa chinensis HOM05D005736 ORTHO05D007215 2.8e-36 156.8 109 68.8
TAR636G3309 Trochodendron aralioides HOM05D005736 ORTHO05D007215 9.8e-34 148.3 110 66.4
TAR629G2822 Trochodendron aralioides HOM05D005736 ORTHO05D007215 1.3e-33 147.9 110 68.2
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 6.2e-20 102.4 79 63.3
MBI18_g08111_MAGBIO Magnolia biondii HOM05D005736 ORTHO05D007215 6.8e-19 99.0 52 80.8
EL10Ac5g11505 Beta vulgaris HOM05D005736 ORTHO05D026989 1.7e-06 57.8 79 41.8


User provided reference genes

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