Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 4.3e-183 644.8 399 100.0
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 5.0e-38 162.9 287 42.9
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 2.7e-36 157.1 282 45.4
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 1.0e-35 155.2 313 43.8
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 1.4e-35 154.8 299 41.8
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 1.4e-35 154.8 272 44.9
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 3.9e-35 153.3 280 45.4
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.1e-34 151.8 281 43.4
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 4.4e-34 149.8 274 43.8
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 4.4e-34 149.8 283 45.6
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 1.3e-33 148.3 224 49.1
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.7e-33 147.9 276 43.5
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 1.7e-33 147.9 276 44.6
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 1.7e-33 147.9 292 43.8
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 3.1e-32 143.7 289 38.4
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 3.1e-32 143.7 274 43.8
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 9.1e-32 142.1 273 44.0
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 2.6e-31 140.6 287 42.2
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 2.6e-31 140.6 292 42.5
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 2.2e-30 137.5 265 43.8
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 3.8e-30 136.7 282 41.1
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.0e-30 136.3 282 42.9
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 5.0e-30 136.3 280 41.1
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 1.1e-29 135.2 279 42.3
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 1.1e-29 135.2 299 41.8
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.5e-29 134.8 291 42.3
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 1.9e-29 134.4 303 39.3
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 3.2e-29 133.7 282 42.2
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 5.5e-29 132.9 292 38.0
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 7.2e-29 132.5 268 42.2
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 9.4e-29 132.1 291 40.2
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 1.6e-28 131.3 287 39.4
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 2.1e-28 131.0 302 38.7
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.7e-28 130.6 296 38.2
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 4.7e-28 129.8 295 38.3
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 6.1e-28 129.4 279 40.9
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 1.4e-27 128.3 293 38.9
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 1.8e-27 127.9 296 40.5
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 3.0e-27 127.1 270 40.4
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 4.0e-27 126.7 288 40.6
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 5.2e-27 126.3 304 38.2
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 1.1e-26 125.2 294 37.4
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 3.3e-26 123.6 287 39.0
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 4.4e-26 123.2 290 37.2
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 7.5e-26 122.5 287 40.8
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 9.7e-26 122.1 265 39.2
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 2.8e-25 120.6 274 36.9
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 3.7e-25 120.2 284 37.3
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 6.3e-25 119.4 291 39.2
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 8.2e-25 119.0 291 39.9
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 8.2e-25 119.0 285 38.9
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.8e-24 117.9 288 37.2
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 3.1e-24 117.1 281 36.7
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 5.3e-24 116.3 310 35.2
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 5.3e-24 116.3 291 40.5
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 7.0e-24 115.9 286 37.4
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 9.1e-24 115.5 286 37.1
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 2.7e-23 114.0 282 40.1
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 4.5e-23 113.2 271 35.1
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 1.0e-22 112.1 282 39.4
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.0e-22 112.1 282 39.4
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 1.7e-22 111.3 278 37.4
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 2.2e-22 110.9 297 40.1
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 6.5e-22 109.4 295 36.9
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 4.2e-21 106.7 250 38.0
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 5.5e-21 106.3 283 38.9
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 7.2e-21 105.9 264 37.1
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 7.2e-21 105.9 276 36.6
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 1.6e-20 104.8 294 36.7
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 4.7e-20 103.2 289 39.1
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 8.0e-20 102.4 296 37.2
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.8e-19 101.3 303 34.3
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 3.0e-19 100.5 304 34.2
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 5.2e-19 99.8 270 35.6
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 7.5e-18 95.9 281 35.9
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 9.8e-18 95.5 229 37.1
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.3e-17 95.1 289 36.3
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 1.2e-15 88.6 307 33.9
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 3.5e-15 87.0 274 32.8
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 1.3e-14 85.1 276 34.4
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 3.8e-14 83.6 290 32.8
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 1.1e-13 82.0 288 35.1
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 1.5e-13 81.6 277 33.6
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 3.2e-13 80.5 215 36.3
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 2.1e-12 77.8 322 32.6
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 6.1e-12 76.3 295 32.5
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.8e-11 74.7 265 33.2
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 5.2e-11 73.2 277 32.9
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 6.8e-11 72.8 298 30.2
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 6.8e-11 72.8 174 39.7
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 2.0e-10 71.2 318 29.9
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 4.4e-10 70.1 110 44.5
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 5.7e-10 69.7 88 48.9
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 9.8e-10 68.9 42 71.4
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 2.2e-09 67.8 279 30.5
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 2.8e-09 67.4 288 31.6
ClCG06G001430 Citrullus lanatus HOM05D007706 ORTHO05D009593 3.7e-09 67.0 278 32.0
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 3.7e-09 67.0 128 42.2
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 4.9e-09 66.6 208 33.2
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 6.3e-09 66.2 87 48.3
Actinidia39932 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.4e-08 65.1 171 35.1
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 2.4e-08 64.3 297 30.3
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 3.1e-08 63.9 299 28.4
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 5.4e-08 63.2 231 31.2
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 7.0e-08 62.8 36 77.8
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 9.2e-08 62.4 77 45.5
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 9.2e-08 62.4 301 29.9
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 1.2e-07 62.0 113 39.8
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 1.6e-07 61.6 76 46.1
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 1.6e-07 61.6 269 31.6
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 2.0e-07 61.2 43 62.8
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 2.7e-07 60.8 165 34.5
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 4.5e-07 60.1 276 32.2
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 4.5e-07 60.1 282 29.8
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 7.7e-07 59.3 92 44.6
Migut.G00574 Erythranthe guttata HOM05D006910 ORTHO05D008937 1.3e-06 58.5 127 39.4
Nitab4.5_0000355g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 1.3e-06 58.5 117 39.3
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 1.3e-06 58.5 32 78.1
Thecc.04G265400 Theobroma cacao HOM05D006910 ORTHO05D008937 1.3e-06 58.5 37 67.6
Nitab4.5_0006344g0050 Nicotiana tabacum HOM05D006910 ORTHO05D008937 2.3e-06 57.8 117 39.3
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 2.9e-06 57.4 41 58.5
Nitab4.5_0002210g0060 Nicotiana tabacum HOM05D006910 ORTHO05D008937 2.9e-06 57.4 88 39.8
Potri.018G130100 Populus trichocarpa HOM05D001903 ORTHO05D001847 2.9e-06 57.4 270 30.4
Nn4g24887 Nelumbo nucifera HOM05D027966 ORTHO05D025782 3.8e-06 57.0 268 26.9
Sed0022884 Sechium edule HOM05D007706 ORTHO05D009593 5.0e-06 56.6 200 33.5
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 8.6e-06 55.8 66 50.0
Eucgr.H00126 Eucalyptus grandis HOM05D006910 ORTHO05D008937 8.6e-06 55.8 77 49.4
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 8.6e-06 55.8 65 53.8


User provided reference genes

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