Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 1.1e-148 530.0 272 100.0
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 1.5e-107 393.3 285 71.2
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 1.3e-106 390.2 280 75.0
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.7e-106 389.8 287 71.1
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 1.7e-106 389.8 274 74.8
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.7e-106 389.8 282 71.3
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 3.8e-106 388.7 272 73.5
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.1e-105 387.1 287 70.7
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 1.9e-105 386.3 274 74.5
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 3.2e-105 385.6 278 73.0
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 9.4e-105 384.0 274 74.1
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 1.6e-104 383.3 272 74.3
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 6.1e-104 381.3 284 71.5
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 6.1e-104 381.3 272 73.2
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 1.0e-103 380.6 285 71.2
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 1.4e-103 380.2 284 71.1
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 2.3e-103 379.4 284 71.1
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 3.0e-103 379.0 270 72.6
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 5.1e-103 378.3 272 73.2
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 5.1e-103 378.3 270 72.2
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 6.7e-103 377.9 277 72.9
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 8.8e-103 377.5 276 71.4
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 1.1e-102 377.1 277 71.5
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 1.5e-102 376.7 280 71.1
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 2.5e-102 375.9 279 71.7
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 3.3e-102 375.6 282 70.6
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 3.3e-102 375.6 275 71.6
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 5.7e-102 374.8 286 68.9
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 7.4e-102 374.4 277 70.4
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 9.7e-102 374.0 273 71.8
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 9.7e-102 374.0 284 69.7
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 2.8e-101 372.5 282 70.2
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.8e-101 372.5 280 70.0
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 4.8e-101 371.7 273 70.3
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 6.3e-101 371.3 277 69.7
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 6.3e-101 371.3 277 70.0
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 1.1e-100 370.5 275 70.2
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.4e-100 370.2 279 69.9
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 2.4e-100 369.4 276 71.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 4.1e-100 368.6 277 69.0
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 9.1e-100 367.5 299 66.2
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.2e-99 367.1 273 70.7
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.2e-99 367.1 279 70.3
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 1.5e-99 366.7 277 69.0
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.0e-99 366.3 278 68.7
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 3.4e-99 365.5 282 70.9
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 4.5e-99 365.2 276 69.6
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 7.7e-99 364.4 230 79.6
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 1.3e-98 363.6 272 72.4
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 1.7e-98 363.2 270 69.3
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.7e-98 363.2 284 68.0
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 2.2e-98 362.8 275 69.1
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.8e-98 362.1 274 70.1
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 6.5e-98 361.3 282 68.1
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 1.1e-97 360.5 264 72.3
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 2.5e-97 359.4 270 68.1
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 5.5e-97 358.2 219 79.5
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 1.2e-96 357.1 277 68.2
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-96 356.7 219 79.0
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 1.6e-96 356.7 222 77.9
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 7.9e-96 354.4 265 69.4
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 1.0e-95 354.0 302 63.6
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 1.4e-95 353.6 223 77.6
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.8e-95 353.2 223 77.1
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 2.3e-95 352.8 223 77.6
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 3.9e-95 352.1 202 84.2
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 8.8e-95 350.9 202 84.7
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.3e-94 349.0 270 67.4
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 4.4e-94 348.6 206 81.6
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 5.7e-94 348.2 229 75.1
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 5.7e-94 348.2 284 66.9
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 7.4e-94 347.8 223 75.8
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 9.7e-94 347.4 223 76.2
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 9.7e-94 347.4 223 76.2
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 1.7e-93 346.7 221 76.9
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 4.8e-93 345.1 202 82.7
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 4.8e-93 345.1 202 82.2
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 4.8e-93 345.1 281 65.8
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 6.3e-93 344.7 270 68.9
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 2.4e-92 342.8 259 68.7
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 2.4e-92 342.8 259 68.7
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 2.4e-92 342.8 202 82.7
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 2.4e-92 342.8 223 74.4
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 4.1e-92 342.0 271 66.8
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 9.1e-92 340.9 276 67.4
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 1.0e-90 337.4 213 78.4
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 5.0e-90 335.1 309 62.5
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 2.5e-89 332.8 278 65.1
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 7.2e-89 331.3 279 66.7
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 6.1e-88 328.2 272 63.2
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 6.1e-88 328.2 219 75.3
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 1.0e-87 327.4 205 77.6
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 4.0e-87 325.5 199 79.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 5.7e-86 321.6 275 64.7
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 5.3e-84 315.1 178 87.6
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 5.3e-84 315.1 282 63.5
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 9.1e-84 314.3 214 74.3
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 1.3e-82 310.5 248 65.3
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 2.9e-82 309.3 221 70.1
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 5.2e-79 298.5 200 74.0
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 1.0e-74 284.3 222 68.0
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 3.8e-74 282.3 273 59.3
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 1.4e-71 273.9 219 65.8
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 6.8e-71 271.6 278 57.9
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 8.3e-69 264.6 164 76.8
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 4.5e-67 258.8 199 65.8
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 5.9e-67 258.5 157 80.3
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 1.0e-66 257.7 156 82.1
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.0e-63 245.7 283 53.0
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 7.5e-62 241.5 283 48.8
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 8.3e-61 238.0 219 57.5
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 9.2e-60 234.6 204 59.8
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-58 231.1 240 56.2
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 5.0e-58 228.8 217 53.0
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 1.6e-51 207.2 222 50.5
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.3e-50 203.4 116 82.8
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 4.9e-45 185.7 174 62.6
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 1.9e-44 183.7 111 79.3
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 6.8e-39 165.2 208 48.6
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.3e-25 119.8 74 74.3
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 1.6e-24 117.5 116 54.3
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 1.6e-08 64.3 62 58.1
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 6.2e-08 62.4 34 79.4
Prupe.6G248300 Prunus persica HOM05D006631 ORTHO05D334351 5.8e-06 55.8 49 65.3


User provided reference genes

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