Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0376 Punica granatum HOM05D006065 ORTHO05D007672 8.1e-83 310.5 167 100.0
Dinv43807 Davidia involucrata HOM05D006065 ORTHO05D007672 5.9e-25 118.2 145 47.6
Thecc.01G360200 Theobroma cacao HOM05D006065 ORTHO05D007672 2.2e-24 116.3 141 49.6
Atru.chr5.461 Acer truncatum HOM05D006065 ORTHO05D007672 3.8e-24 115.5 172 43.6
COL.COLO4_12704 Corchorus olitorius HOM05D006065 ORTHO05D007672 1.1e-23 114.0 139 48.2
Manes.05G035300 Manihot esculenta HOM05D006065 ORTHO05D007672 2.5e-23 112.8 150 44.0
Ciclev10022632m.g Citrus clementina HOM05D006065 ORTHO05D007672 5.5e-23 111.7 167 43.1
Actinidia10016 Actinidia chinensis HOM05D006065 ORTHO05D007672 9.4e-23 110.9 144 47.9
MBI18_g21561_MAGBIO Magnolia biondii HOM05D006065 ORTHO05D007672 1.2e-22 110.5 145 45.5
CANSAT56G3634 Cannabis sativa HOM05D006065 ORTHO05D007672 2.1e-22 109.8 149 47.0
Cfa003936 Carpinus fangiana HOM05D006065 ORTHO05D007672 2.1e-22 109.8 138 47.1
Dinv32472 Davidia involucrata HOM05D006065 ORTHO05D007672 2.1e-22 109.8 150 46.0
Lj1g0009386 Lotus japonicus HOM05D006065 ORTHO05D007672 2.1e-22 109.8 140 47.9
Cpa.g.sc18.247 Carica papaya HOM05D006065 ORTHO05D007672 6.1e-22 108.2 135 43.7
Gorai.007G098900 Gossypium raimondii HOM05D006065 ORTHO05D007672 1.0e-21 107.5 137 47.4
Gohir.A08G131000 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.8e-21 106.7 139 47.5
Potri.014G083100 Populus trichocarpa HOM05D006065 ORTHO05D007672 2.3e-21 106.3 153 45.8
QL08p049008 Quercus lobata HOM05D006065 ORTHO05D007672 3.0e-21 105.9 138 46.4
CsaV3_3G008970 Cucumis sativus L. HOM05D006065 ORTHO05D007672 5.2e-21 105.1 146 45.9
Duzib138G1923 Durio zibethinus HOM05D006065 ORTHO05D007672 8.8e-21 104.4 143 44.1
Gohir.D08G152500 Gossypium hirsutum HOM05D006065 ORTHO05D007672 8.8e-21 104.4 139 45.3
Sabra14G0060500 Salix brachista HOM05D006065 ORTHO05D007672 1.1e-20 104.0 132 50.8
Gorai.004G158400 Gossypium raimondii HOM05D006065 ORTHO05D007672 2.0e-20 103.2 139 45.3
Sed0025321 Sechium edule HOM05D006065 ORTHO05D007672 2.0e-20 103.2 140 47.1
VMungo1383G0981 Vigna mungo HOM05D006065 ORTHO05D007672 2.0e-20 103.2 140 45.7
CiPaw.01G060100 Carya illinoinensis HOM05D006065 ORTHO05D007672 2.6e-20 102.8 145 44.8
ClCG05G001580 Citrullus lanatus HOM05D006065 ORTHO05D007672 2.6e-20 102.8 137 46.7
DCAR_006926 Daucus carota HOM05D006065 ORTHO05D007672 5.7e-20 101.7 146 45.9
Actinidia20914 Actinidia chinensis HOM05D006065 ORTHO05D007672 7.4e-20 101.3 135 45.9
Glyma.18G230000 Glycine max HOM05D006065 ORTHO05D007672 9.7e-20 100.9 140 45.7
Glyma.09G262200 Glycine max HOM05D006065 ORTHO05D007672 2.2e-19 99.8 148 44.6
unitig_8.g3395 Utricularia gibba HOM05D006065 ORTHO05D007672 2.8e-19 99.4 139 41.7
TAR629G3005 Trochodendron aralioides HOM05D006065 ORTHO05D007672 4.8e-19 98.6 145 43.4
Sabra02G0126300 Salix brachista HOM05D006065 ORTHO05D007672 6.3e-19 98.2 132 47.7
arahy.Tifrunner.gnm1.ann1.QD83TI Arachis hypogaea HOM05D006065 ORTHO05D007672 8.2e-19 97.8 150 42.7
vmacro13279 Vaccinium macrocarpon HOM05D006065 ORTHO05D007672 1.1e-18 97.4 146 43.8
Duzib133G1075 Durio zibethinus HOM05D006065 ORTHO05D007672 1.4e-18 97.1 139 46.0
Oeu010611.1 Olea europaea HOM05D006065 ORTHO05D007672 1.4e-18 97.1 142 42.3
Medtr7g076690 Medicago truncatula HOM05D006065 ORTHO05D007672 1.8e-18 96.7 140 43.6
Phvul.008G067900 Phaseolus vulgaris HOM05D006065 ORTHO05D007672 1.8e-18 96.7 140 41.4
Eucgr.D02286 Eucalyptus grandis HOM05D006065 ORTHO05D007672 2.4e-18 96.3 130 47.7
Ca_07890_v3 Cicer arietinum L. HOM05D006065 ORTHO05D007672 5.3e-18 95.1 138 43.5
Sc01g0003370 Simmondsia chinensis HOM05D006065 ORTHO05D007672 1.6e-17 93.6 152 39.5
Aa31LG5G450 Aethionema arabicum HOM05D006065 ORTHO05D007672 2.6e-17 92.8 134 41.0
Haze_15490 Corylus avellana HOM05D006065 ORTHO05D007672 2.6e-17 92.8 187 37.4
TWI59G0879 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 4.5e-17 92.0 135 43.0
THA.LOC104817023 Tarenaya hassleriana HOM05D006065 ORTHO05D007672 5.9e-17 91.7 135 41.5
Aqoxy7G00322 Aquilegia oxysepala HOM05D006065 ORTHO05D007672 7.7e-17 91.3 126 42.1
TPR.G37820 Trifolium pratense HOM05D006065 ORTHO05D007672 7.7e-17 91.3 142 40.1
Prupe.2G168300 Prunus persica HOM05D006065 ORTHO05D007672 1.0e-16 90.9 149 40.9
Hund16927 Selenicereus undatus HOM05D006065 ORTHO05D007672 1.3e-16 90.5 148 39.2
Manes.01G258100 Manihot esculenta HOM05D006065 ORTHO05D007672 1.7e-16 90.1 128 41.4
MSTRG.4858 Avicennia marina HOM05D006065 ORTHO05D007672 2.2e-16 89.7 142 41.5
Sp6g00560 Schrenkiella parvula HOM05D006065 ORTHO05D007672 2.9e-16 89.4 152 38.2
Lalb_Chr19g0127061 Lupinus albus HOM05D006065 ORTHO05D007672 5.0e-16 88.6 140 40.0
PSO832G3783 Papaver somniferum HOM05D006065 ORTHO05D007672 5.0e-16 88.6 142 38.0
GSVIVG01018349001 Vitis vinifera HOM05D006065 ORTHO05D007672 5.0e-16 88.6 123 43.9
SalBow3G2602 Salvia bowleyana HOM05D006065 ORTHO05D007672 6.5e-16 88.2 135 45.9
Hma1.2p1_0001F.1_g001420 Hydrangea macrophylla HOM05D006065 ORTHO05D007672 1.1e-15 87.4 180 35.6
Migut.N01441 Erythranthe guttata HOM05D006065 ORTHO05D007672 1.5e-15 87.0 153 41.2
TAR374G1295 Trochodendron aralioides HOM05D006065 ORTHO05D007672 1.5e-15 87.0 140 42.1
Cc02_g37900 Coffea canephora HOM05D006065 ORTHO05D007672 2.5e-15 86.3 126 46.0
arahy.Tifrunner.gnm1.ann1.WJC6IK Arachis hypogaea HOM05D006065 ORTHO05D007672 4.2e-15 85.5 180 37.8
RcHm_v2.0_Chr1g0355101 Rosa chinensis HOM05D006065 ORTHO05D007672 7.2e-15 84.7 137 40.1
PSO210G7571 Papaver somniferum HOM05D006065 ORTHO05D007672 2.1e-14 83.2 142 38.0
AT4G00525 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 2.7e-14 82.8 143 38.5
GSVIVG01026900001 Vitis vinifera HOM05D006065 ORTHO05D007672 2.7e-14 82.8 123 42.3
HanXRQChr13g0426531 Helianthus annuus HOM05D006065 ORTHO05D007672 4.7e-14 82.0 147 40.1
TWI14G0791 Tripterygium wilfordii HOM05D006065 ORTHO05D007672 6.1e-14 81.6 158 40.5
CDE06G0574 Ceratophyllum demersum HOM05D006065 ORTHO05D007672 8.0e-14 81.3 142 38.0
Sed0021596 Sechium edule HOM05D006065 ORTHO05D007672 8.0e-14 81.3 138 43.5
Gohir.D11G092600 Gossypium hirsutum HOM05D006065 ORTHO05D007672 1.4e-13 80.5 137 38.7
Ah.05g180670 Amaranthus hybridus HOM05D006065 ORTHO05D007672 1.8e-13 80.1 123 37.4
Thhalv10029047m.g Eutrema salsugineum HOM05D006065 ORTHO05D007672 2.3e-13 79.7 149 34.9
Gohir.A11G088300 Gossypium hirsutum HOM05D006065 ORTHO05D007672 2.3e-13 79.7 142 37.3
FAN03G2883 Fragaria x ananassa HOM05D006065 ORTHO05D007672 3.0e-13 79.3 147 38.8
Carub.0006s3674 Capsella rubella HOM05D006065 ORTHO05D007672 1.5e-12 77.0 152 36.2
CiPaw.02G030100 Carya illinoinensis HOM05D006065 ORTHO05D007672 2.0e-12 76.6 123 40.7
Nitab4.5_0008002g0050 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.6e-12 76.3 129 38.8
Psat3g110920 Pisum sativum HOM05D006065 ORTHO05D007672 3.3e-12 75.9 135 35.6
SGA_v2.0_scaffold11G05664 Striga asiatica HOM05D006065 ORTHO05D007672 3.3e-12 75.9 144 36.8
FvH4_7g14190 Fragaria vesca HOM05D006065 ORTHO05D007672 4.4e-12 75.5 147 37.4
FAN10G0270 Fragaria x ananassa HOM05D006065 ORTHO05D007672 4.4e-12 75.5 147 38.1
Rhsim07G0016100 Rhododendron simsii HOM05D006065 ORTHO05D007672 4.4e-12 75.5 223 29.1
Sopen01g038320 Solanum pennellii HOM05D006065 ORTHO05D007672 5.7e-12 75.1 145 37.9
FAN01G0390 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.3e-11 73.9 147 38.1
FAN06G3027 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.3e-11 73.9 147 36.7
FAN06G3847 Fragaria x ananassa HOM05D006065 ORTHO05D007672 1.7e-11 73.6 147 36.7
Peaxi162Scf00020g00240 Petunia axillaris HOM05D006065 ORTHO05D007672 1.7e-11 73.6 129 35.7
Nitab4.5_0001702g0100 Nicotiana tabacum HOM05D006065 ORTHO05D007672 2.2e-11 73.2 123 38.2
MSTRG.28221 Avicennia marina HOM05D006065 ORTHO05D007672 2.8e-11 72.8 153 36.6
A03p32140 Brassica napus HOM05D006065 ORTHO05D007672 2.8e-11 72.8 144 34.0
PGSC0003DMG400021646 Solanum tuberosum HOM05D006065 ORTHO05D007672 3.7e-11 72.4 173 35.8
EL10Ac1g00426 Beta vulgaris HOM05D006065 ORTHO05D007672 4.8e-11 72.0 113 38.1
PGSC0003DMG400000036 Solanum tuberosum HOM05D006065 ORTHO05D007672 4.8e-11 72.0 145 36.6
CAN.G78.55 Capsicum annuum HOM05D006065 ORTHO05D007672 6.3e-11 71.6 132 39.4
HPP92_008504 Vanilla planifolia HOM05D006065 ORTHO05D007672 6.3e-11 71.6 142 35.9
BraA03t12384Z Brassica rapa HOM05D006065 ORTHO05D007672 8.2e-11 71.2 144 34.0
Solyc05g049940.3 Solanum lycopersicum HOM05D006065 ORTHO05D007672 8.2e-11 71.2 121 38.0
Sopen05g028300 Solanum pennellii HOM05D006065 ORTHO05D007672 1.8e-10 70.1 121 37.2
Lsat_1_v5_gn_7_4500 Lactuca sativa HOM05D006065 ORTHO05D007672 7.0e-10 68.2 141 39.7
SGA_v2.0_scaffold43G16421 Striga asiatica HOM05D006065 ORTHO05D007672 1.6e-09 67.0 152 33.6
AL6G52950 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 2.7e-09 66.2 143 34.3
Nitab4.5_0005277g0010 Nicotiana tabacum HOM05D006065 ORTHO05D007672 3.5e-09 65.9 124 37.1
SEGI_06767 Sequoiadendron giganteum HOM05D006065 ORTHO05D007672 1.0e-08 64.3 137 34.3
BcaC01g06870 Brassica carinata HOM05D006065 ORTHO05D007672 1.3e-08 63.9 147 34.7
BcaNung05355 Brassica carinata HOM05D006065 ORTHO05D007672 1.3e-08 63.9 147 34.7
BolC3t16187H Brassica oleracea HOM05D006065 ORTHO05D007672 1.3e-08 63.9 147 34.7
MD07G1138600 Malus domestica HOM05D006065 ORTHO05D007672 1.3e-08 63.9 121 35.5
Oeu020560.2 Olea europaea HOM05D006065 ORTHO05D007672 1.9e-07 60.1 203 29.6
AT1G01715 Arabidopsis thaliana HOM05D006065 ORTHO05D007672 4.2e-07 58.9 138 29.7
CSS0003041 Camellia sinensis var. sinensis HOM05D006065 ORTHO05D007672 9.4e-07 57.8 182 31.9
AL1G10640 Arabidopsis lyrata HOM05D006065 ORTHO05D007672 2.1e-06 56.6 139 29.5
MELO3C006115.2 Cucumis melo HOM05D006065 ORTHO05D007672 6.1e-06 55.1 96 39.6


User provided reference genes

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