Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 1.8e-93 345.9 171 100.0
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 9.8e-60 233.8 167 70.7
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 5.4e-58 228.0 167 68.3
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 9.2e-58 227.3 171 69.0
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.2e-57 226.9 167 68.3
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.2e-57 226.9 167 68.3
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 1.7e-56 223.0 159 69.8
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.3e-56 222.6 167 67.1
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 3.9e-56 221.9 164 69.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 1.1e-55 220.3 158 65.8
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 1.1e-55 220.3 158 69.6
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.1e-55 220.3 176 65.3
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 1.1e-55 220.3 164 68.3
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 1.9e-55 219.5 169 66.9
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 2.5e-55 219.2 170 67.1
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 3.3e-55 218.8 159 67.9
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 4.3e-55 218.4 160 67.5
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 5.6e-55 218.0 158 67.7
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 2.1e-54 216.1 167 65.9
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 2.8e-54 215.7 161 68.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 2.8e-54 215.7 171 63.2
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.8e-54 215.7 171 64.3
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 2.8e-54 215.7 159 66.7
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 3.6e-54 215.3 165 65.5
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 3.6e-54 215.3 165 65.5
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 3.6e-54 215.3 158 67.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 3.6e-54 215.3 172 62.8
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 4.7e-54 214.9 157 68.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 8.1e-54 214.2 156 66.0
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 1.1e-53 213.8 164 65.2
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.1e-53 213.8 158 67.1
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.4e-53 213.4 156 67.3
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 1.4e-53 213.4 164 65.9
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 3.1e-53 212.2 160 64.4
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 4.0e-53 211.8 158 64.6
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 5.2e-53 211.5 164 61.6
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 8.9e-53 210.7 164 61.6
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 1.2e-52 210.3 158 66.5
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.5e-52 209.9 157 67.5
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 1.5e-52 209.9 159 66.7
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 2.0e-52 209.5 158 67.7
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.0e-52 209.5 162 66.7
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.0e-52 209.5 162 66.7
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 2.6e-52 209.1 159 66.0
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 2.6e-52 209.1 159 65.4
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 3.4e-52 208.8 163 65.0
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 4.4e-52 208.4 166 65.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.4e-52 208.4 160 65.6
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 4.4e-52 208.4 167 62.3
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 5.8e-52 208.0 157 66.2
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 5.8e-52 208.0 164 61.0
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 7.6e-52 207.6 160 63.1
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 7.6e-52 207.6 170 60.6
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.3e-51 206.8 159 64.8
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 1.3e-51 206.8 159 66.0
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.3e-51 206.8 167 61.7
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.7e-51 206.5 159 64.8
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 2.2e-51 206.1 159 60.4
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 2.9e-51 205.7 159 65.4
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 2.9e-51 205.7 159 64.8
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 8.3e-51 204.1 161 62.1
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.1e-50 203.8 161 63.4
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.4e-50 203.4 168 64.3
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.4e-50 203.4 159 63.5
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.4e-50 203.4 158 63.3
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 2.4e-50 202.6 159 64.2
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 2.4e-50 202.6 154 65.6
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 2.4e-50 202.6 155 66.5
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 1.6e-49 199.9 157 62.4
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 2.1e-49 199.5 157 63.1
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 2.7e-49 199.1 157 63.1
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 2.7e-49 199.1 156 64.1
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 3.5e-49 198.7 162 62.3
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 7.8e-49 197.6 155 61.9
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 7.8e-49 197.6 157 62.4
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.0e-48 197.2 157 61.8
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 1.0e-48 197.2 198 52.5
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.3e-48 196.8 158 62.0
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.7e-48 196.4 186 53.8
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.9e-48 195.3 210 51.9
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.1e-47 193.7 157 60.5
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 2.5e-47 192.6 161 60.2
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 5.6e-47 191.4 156 60.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 9.6e-47 190.7 167 57.5
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 4.9e-43 178.3 239 44.8
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.4e-42 176.8 119 72.3
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 1.9e-42 176.4 170 55.9
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 4.2e-42 175.3 118 72.0
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 4.6e-41 171.8 137 62.8
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 4.6e-41 171.8 129 65.9
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 7.8e-41 171.0 171 52.6
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 1.9e-39 166.4 118 68.6
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 9.6e-39 164.1 157 55.4
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 3.4e-36 155.6 124 61.3
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 3.8e-35 152.1 99 75.8
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 3.2e-34 149.1 111 69.4
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.5e-31 140.2 113 62.8
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 9.6e-31 137.5 93 68.8
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 6.9e-29 131.3 160 48.1
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.0e-20 103.2 121 47.9
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.8e-19 99.0 162 36.4
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 3.7e-14 82.4 69 59.4
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.0e-12 76.6 73 54.8
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.0e-12 76.6 98 46.9
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 1.3e-11 73.9 98 44.9
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 7.1e-10 68.2 81 50.6


User provided reference genes

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