Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0195 Punica granatum HOM05D049132 ORTHO05D002739 4.5e-129 464.5 225 100.0
PGR031G3916 Punica granatum HOM05D049132 ORTHO05D002739 4.5e-129 464.5 225 100.0
Ciclev10006564m.g Citrus clementina HOM05D002652 ORTHO05D002739 1.5e-20 104.0 158 36.1
Dinv29797 Davidia involucrata HOM05D002652 ORTHO05D002739 2.9e-19 99.8 230 30.4
Rhsim02G0045100 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.2e-18 96.3 224 28.6
MSTRG.4179 Avicennia marina HOM05D002652 ORTHO05D002739 5.5e-18 95.5 172 33.1
Oeu059391.1 Olea europaea HOM05D002652 ORTHO05D002739 7.2e-18 95.1 234 26.5
RhsimUnG0101000 Rhododendron simsii HOM05D002652 ORTHO05D002739 7.2e-18 95.1 152 32.2
Hma1.2p1_0385F.1_g141620 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 2.1e-17 93.6 161 32.9
Prupe.1G049700 Prunus persica HOM05D002652 ORTHO05D002739 3.6e-17 92.8 243 28.8
ECA247G3161 Erigeron canadensis HOM05D002652 ORTHO05D002739 1.0e-16 91.3 228 28.1
CSS0002481 Camellia sinensis var. sinensis HOM05D002652 ORTHO05D002739 1.4e-16 90.9 155 31.6
Rhsim02G0046000 Rhododendron simsii HOM05D002652 ORTHO05D002739 3.0e-16 89.7 225 25.3
Rhsim02G0044800 Rhododendron simsii HOM05D002652 ORTHO05D002739 6.7e-16 88.6 124 34.7
SalBow2G0549 Salvia bowleyana HOM05D002652 ORTHO05D002739 1.5e-15 87.4 170 32.4
Potri.010G191400 Populus trichocarpa HOM05D002652 ORTHO05D002739 2.0e-15 87.0 177 29.4
Rhsim02G0047400 Rhododendron simsii HOM05D002652 ORTHO05D002739 2.6e-15 86.7 157 30.6
GSVIVG01027929001 Vitis vinifera HOM05D002652 ORTHO05D002739 2.6e-15 86.7 215 28.8
Potri.T121000 Populus trichocarpa HOM05D002652 ORTHO05D002739 7.4e-15 85.1 194 26.3
Lsat_1_v5_gn_2_104120 Lactuca sativa HOM05D002652 ORTHO05D002739 2.8e-14 83.2 178 28.1
HanXRQChr07g0194071 Helianthus annuus HOM05D002652 ORTHO05D002739 8.2e-14 81.6 209 28.2
Actinidia39934 Actinidia chinensis HOM05D002652 ORTHO05D002739 2.4e-13 80.1 149 28.9
vmacro15483 Vaccinium macrocarpon HOM05D002652 ORTHO05D002739 3.1e-13 79.7 142 33.8
Ciclev10007025m.g Citrus clementina HOM05D002652 ORTHO05D002739 5.3e-13 79.0 147 31.3
Hma1.2p1_0042F.1_g025730 Hydrangea macrophylla HOM05D002652 ORTHO05D002739 9.1e-13 78.2 174 29.9
COL.COLO4_15898 Corchorus olitorius HOM05D002652 ORTHO05D002739 1.6e-12 77.4 192 31.2
SalBow2G2144 Salvia bowleyana HOM05D000062 ORTHO05D000043 2.0e-12 77.0 178 28.1
TAR174G0001 Trochodendron aralioides HOM05D002652 ORTHO05D002739 4.5e-12 75.9 148 31.1
Nn5g27876 Nelumbo nucifera HOM05D002652 ORTHO05D002739 7.7e-12 75.1 157 31.2
Cpa.g.sc59.9 Carica papaya HOM05D002652 ORTHO05D002739 1.0e-11 74.7 231 26.0
Nn1g00658 Nelumbo nucifera HOM05D002652 ORTHO05D002739 1.0e-11 74.7 187 27.8
TAR365G0384 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.3e-11 74.3 148 31.8
Nn1g00655 Nelumbo nucifera HOM05D002652 ORTHO05D002739 2.9e-11 73.2 187 27.8
Nn1g00657 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.8e-11 72.8 155 31.0
Prupe.1G049600 Prunus persica HOM05D002652 ORTHO05D002739 6.5e-11 72.0 145 31.0
Aqoxy7G00431 Aquilegia oxysepala HOM05D002652 ORTHO05D002739 1.5e-10 70.9 153 30.7
Rhsim02G0045000 Rhododendron simsii HOM05D002652 ORTHO05D002739 5.5e-10 68.9 116 31.9
Nn1g00661 Nelumbo nucifera HOM05D002652 ORTHO05D002739 7.2e-10 68.6 151 27.2
DCAR_002581 Daucus carota HOM05D002652 ORTHO05D002739 9.4e-10 68.2 227 23.8
FAN12G2993 Fragaria x ananassa HOM05D002652 ORTHO05D002739 1.6e-09 67.4 179 31.3
Cpa.g.sc8968.1 Carica papaya HOM05D002652 ORTHO05D002739 3.6e-09 66.2 129 31.0
FvH4_4g04990 Fragaria vesca HOM05D002652 ORTHO05D002739 3.6e-09 66.2 147 33.3
FAN10G1323 Fragaria x ananassa HOM05D002652 ORTHO05D002739 3.6e-09 66.2 157 31.8
Cfa014794 Carpinus fangiana HOM05D002652 ORTHO05D002739 4.7e-09 65.9 154 30.5
FAN10G2095 Fragaria x ananassa HOM05D002652 ORTHO05D002739 4.7e-09 65.9 157 31.8
FvH4_4g04740 Fragaria vesca HOM05D002652 ORTHO05D002739 3.0e-08 63.2 157 31.2
COL.COLO4_15909 Corchorus olitorius HOM05D002652 ORTHO05D002739 6.7e-08 62.0 154 29.2
BcaB07g30971 Brassica carinata HOM05D002652 ORTHO05D002739 1.1e-07 61.2 194 25.8
A09p20860 Brassica napus HOM05D002652 ORTHO05D002739 1.1e-07 61.2 157 29.3
BraA09t37688Z Brassica rapa HOM05D002652 ORTHO05D002739 1.1e-07 61.2 157 29.3
TAR636G1048 Trochodendron aralioides HOM05D002652 ORTHO05D002739 1.5e-07 60.8 152 31.6
COL.COLO4_15907 Corchorus olitorius HOM05D002652 ORTHO05D002739 2.0e-07 60.5 154 29.9
CiPaw.02G106100 Carya illinoinensis HOM05D002652 ORTHO05D002739 2.6e-07 60.1 194 24.2
Nn1g08811 Nelumbo nucifera HOM05D002652 ORTHO05D002739 3.3e-07 59.7 185 26.5
Prupe.1G050000 Prunus persica HOM05D002652 ORTHO05D002739 5.7e-07 58.9 229 24.0


User provided reference genes

Program Settings