Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 2.9e-54 215.3 136 100.0
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 7.1e-29 131.0 75 77.3
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 4.6e-28 128.3 76 77.6
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 4.6e-28 128.3 74 78.4
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 7.9e-28 127.5 140 68.6
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 1.0e-27 127.1 77 76.6
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 1.8e-27 126.3 127 62.2
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 2.3e-27 125.9 75 77.3
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 2.3e-27 125.9 75 77.3
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 3.0e-27 125.6 77 74.0
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 8.7e-27 124.0 75 76.0
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 1.1e-26 123.6 77 72.7
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 1.9e-26 122.9 141 56.0
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 2.5e-26 122.5 141 67.4
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 2.5e-26 122.5 76 73.7
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 3.3e-26 122.1 76 73.7
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 4.3e-26 121.7 72 75.0
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 4.3e-26 121.7 76 72.4
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 4.3e-26 121.7 75 73.3
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 5.7e-26 121.3 74 71.6
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 5.7e-26 121.3 74 73.0
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 5.7e-26 121.3 76 71.1
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 7.4e-26 120.9 75 74.7
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.7e-26 120.6 74 71.6
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.7e-26 120.6 74 71.6
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 9.7e-26 120.6 74 71.6
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 9.7e-26 120.6 74 71.6
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 1.3e-25 120.2 76 71.1
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 2.2e-25 119.4 136 64.0
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 4.8e-25 118.2 73 72.6
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 8.2e-25 117.5 74 73.0
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.4e-24 116.7 76 69.7
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 1.4e-24 116.7 76 69.7
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 1.8e-24 116.3 74 66.2
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 1.8e-24 116.3 72 69.4
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 1.8e-24 116.3 137 62.8
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 1.8e-24 116.3 132 62.9
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 1.8e-24 116.3 75 68.0
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 2.4e-24 115.9 74 68.9
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 2.4e-24 115.9 74 66.2
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 3.1e-24 115.5 140 64.3
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.1e-24 115.5 74 68.9
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 5.3e-24 114.8 75 66.7
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 5.3e-24 114.8 75 62.7
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 6.9e-24 114.4 75 68.0
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 6.9e-24 114.4 74 67.6
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 9.0e-24 114.0 133 62.4
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 1.5e-23 113.2 123 47.2
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 1.5e-23 113.2 71 70.4
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 2.0e-23 112.8 132 43.2
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 3.4e-23 112.1 132 59.8
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 5.9e-23 111.3 72 69.4
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 5.9e-23 111.3 74 68.9
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 5.9e-23 111.3 71 69.0
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 5.9e-23 111.3 135 54.1
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 5.9e-23 111.3 71 66.2
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 1.0e-22 110.5 76 65.8
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 1.3e-22 110.2 76 63.2
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 1.3e-22 110.2 76 61.8
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 1.7e-22 109.8 71 69.0
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 2.9e-22 109.0 72 66.7
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 2.9e-22 109.0 72 66.7
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 2.9e-22 109.0 72 66.7
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 2.9e-22 109.0 72 66.7
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 2.9e-22 109.0 72 66.7
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 3.8e-22 108.6 73 68.5
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 5.0e-22 108.2 72 66.7
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 6.5e-22 107.8 76 61.8
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 6.5e-22 107.8 71 67.6
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 6.5e-22 107.8 75 62.7
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 8.5e-22 107.5 75 62.7
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 1.1e-21 107.1 72 65.3
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.1e-21 107.1 74 60.8
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 1.4e-21 106.7 74 62.2
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 1.4e-21 106.7 134 43.3
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 1.4e-21 106.7 72 65.3
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 3.2e-21 105.5 75 62.7
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 4.2e-21 105.1 75 61.3
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 7.2e-21 104.4 72 63.9
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 9.4e-21 104.0 71 64.8
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 9.4e-21 104.0 130 50.0
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 1.6e-20 103.2 72 62.5
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 1.6e-20 103.2 135 44.4
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 6.1e-20 101.3 134 60.4
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 2.5e-18 95.9 70 60.0
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 5.7e-18 94.7 65 63.1
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 2.2e-17 92.8 63 61.9
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 1.8e-16 89.7 75 53.3
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 4.1e-16 88.6 59 67.8
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 7.7e-15 84.3 70 54.3
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 1.4e-11 73.6 48 66.7
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 3.9e-11 72.0 69 50.7
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 8.8e-11 70.9 74 45.9
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 1.4e-08 63.5 57 47.4
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 2.9e-06 55.8 99 57.6


User provided reference genes

Program Settings