Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0111 Punica granatum HOM05D004850 ORTHO05D005971 1.1e-261 906.0 438 100.0
CiPaw.11G092600 Carya illinoinensis HOM05D004850 ORTHO05D005971 1.3e-228 796.2 437 84.2
TWI15G0149 Tripterygium wilfordii HOM05D004850 ORTHO05D005971 2.2e-228 795.4 438 83.6
Haze_08241 Corylus avellana HOM05D004850 ORTHO05D005971 3.7e-228 794.7 437 84.9
Cfa012428 Carpinus fangiana HOM05D004850 ORTHO05D005971 1.1e-227 793.1 452 82.5
Eucgr.D02190 Eucalyptus grandis HOM05D004850 ORTHO05D005971 5.9e-226 787.3 437 83.5
MD06G1033100 Malus domestica HOM05D004850 ORTHO05D005971 1.1e-224 783.1 437 82.6
Dinv25211 Davidia involucrata HOM05D004850 ORTHO05D005971 1.9e-224 782.3 438 82.0
Duzib084G0351 Durio zibethinus HOM05D004850 ORTHO05D005971 3.2e-224 781.6 438 82.9
Hma1.2p1_0991F.1_g245100 Hydrangea macrophylla HOM05D004850 ORTHO05D005971 7.2e-224 780.4 437 83.1
Gohir.D03G170933 Gossypium hirsutum HOM05D004850 ORTHO05D005971 9.4e-224 780.0 438 83.1
Nn6g33598 Nelumbo nucifera HOM05D004850 ORTHO05D005971 9.4e-224 780.0 438 82.2
Ciclev10031569m.g Citrus clementina HOM05D004850 ORTHO05D005971 1.2e-223 779.6 438 82.2
Manes.17G013000 Manihot esculenta HOM05D004850 ORTHO05D005971 1.2e-223 779.6 435 83.7
Thecc.03G228700 Theobroma cacao HOM05D004850 ORTHO05D005971 1.2e-223 779.6 438 82.6
FAN08G3086 Fragaria x ananassa HOM05D004850 ORTHO05D005971 4.7e-223 777.7 434 82.9
Actinidia03377 Actinidia chinensis HOM05D004850 ORTHO05D005971 6.1e-223 777.3 433 82.9
Lsat_1_v5_gn_6_64460 Lactuca sativa HOM05D004850 ORTHO05D005971 6.1e-223 777.3 437 81.9
FAN13G0589 Fragaria x ananassa HOM05D004850 ORTHO05D005971 8.0e-223 776.9 434 82.7
Prupe.5G038300 Prunus persica HOM05D004850 ORTHO05D005971 8.0e-223 776.9 437 82.4
Migut.E00931 Erythranthe guttata HOM05D004850 ORTHO05D005971 1.0e-222 776.5 438 83.1
MSTRG.1982 Avicennia marina HOM05D004850 ORTHO05D005971 1.4e-222 776.2 438 82.9
Gohir.A03G001400 Gossypium hirsutum HOM05D004850 ORTHO05D005971 1.4e-222 776.2 438 82.6
Potri.001G143200 Populus trichocarpa HOM05D004850 ORTHO05D005971 2.3e-222 775.4 435 81.8
CANSAT21G2632 Cannabis sativa HOM05D004850 ORTHO05D005971 4.0e-222 774.6 436 82.3
FvH4_5g21890 Fragaria vesca HOM05D004850 ORTHO05D005971 8.8e-222 773.5 434 82.5
Duzib205G2010 Durio zibethinus HOM05D004850 ORTHO05D005971 2.0e-221 772.3 438 81.5
ECA233G2661 Erigeron canadensis HOM05D004850 ORTHO05D005971 2.0e-221 772.3 438 81.7
RcHm_v2.0_Chr7g0209441 Rosa chinensis HOM05D004850 ORTHO05D005971 2.0e-221 772.3 441 81.2
FAN18G1246 Fragaria x ananassa HOM05D004850 ORTHO05D005971 2.6e-221 771.9 434 82.3
MD16G1275900 Malus domestica HOM05D004850 ORTHO05D005971 3.4e-221 771.5 437 82.4
CSS0027944 Camellia sinensis var. sinensis HOM05D004850 ORTHO05D005971 4.4e-221 771.2 437 82.2
Solyc08g076990.3 Solanum lycopersicum HOM05D004850 ORTHO05D005971 4.4e-221 771.2 436 81.7
arahy.Tifrunner.gnm1.ann1.IM2DA2 Arachis hypogaea HOM05D004850 ORTHO05D005971 9.8e-221 770.0 434 82.0
arahy.Tifrunner.gnm1.ann1.Y05B39 Arachis hypogaea HOM05D004850 ORTHO05D005971 9.8e-221 770.0 434 82.0
Peaxi162Scf00460g00615 Petunia axillaris HOM05D004850 ORTHO05D005971 1.3e-220 769.6 436 81.9
Sopen08g025570 Solanum pennellii HOM05D004850 ORTHO05D005971 1.7e-220 769.2 436 81.2
CAN.G1381.2 Capsicum annuum HOM05D004850 ORTHO05D005971 2.8e-220 768.5 436 81.9
Lalb_Chr16g0379121 Lupinus albus HOM05D004850 ORTHO05D005971 4.8e-220 767.7 435 80.2
Ca_24651_v3 Cicer arietinum L. HOM05D004850 ORTHO05D005971 1.1e-219 766.5 436 81.0
Medtr5g014410 Medicago truncatula HOM05D004850 ORTHO05D005971 1.8e-219 765.8 436 80.0
COL.COLO4_17049 Corchorus olitorius HOM05D004850 ORTHO05D005971 5.4e-219 764.2 438 81.1
HanXRQChr06g0178401 Helianthus annuus HOM05D004850 ORTHO05D005971 7.0e-219 763.8 436 80.7
TAR629G1238 Trochodendron aralioides HOM05D004850 ORTHO05D005971 7.0e-219 763.8 438 81.5
C07p49180 Brassica napus HOM05D004850 ORTHO05D005971 1.2e-218 763.1 436 81.4
BolC7t45428H Brassica oleracea HOM05D004850 ORTHO05D005971 1.2e-218 763.1 436 81.4
A03p50790 Brassica napus HOM05D004850 ORTHO05D005971 1.6e-218 762.7 436 81.4
Nitab4.5_0001963g0010 Nicotiana tabacum HOM05D004850 ORTHO05D005971 2.0e-218 762.3 434 81.3
Lj2g0005935 Lotus japonicus HOM05D004850 ORTHO05D005971 3.5e-218 761.5 437 79.9
BraA03t14168Z Brassica rapa HOM05D004850 ORTHO05D005971 4.5e-218 761.1 436 81.4
Potri.003G091100 Populus trichocarpa HOM05D004850 ORTHO05D005971 5.9e-218 760.8 433 80.8
VMungo1215G1005 Vigna mungo HOM05D004850 ORTHO05D005971 1.7e-217 759.2 430 80.7
unitig_21.g20382 Utricularia gibba HOM05D004850 ORTHO05D005971 2.3e-217 758.8 428 82.9
ATR0049G003 Amborella trichopoda HOM05D004850 ORTHO05D005971 2.9e-217 758.4 438 80.8
THA.LOC104827763 Tarenaya hassleriana HOM05D004850 ORTHO05D005971 2.9e-217 758.4 428 81.5
Cpa.g.sc239.6 Carica papaya HOM05D004850 ORTHO05D005971 6.6e-217 757.3 439 81.8
Thhalv10025214m.g Eutrema salsugineum HOM05D004850 ORTHO05D005971 1.9e-216 755.7 435 80.5
Glyma.11G043300 Glycine max HOM05D004850 ORTHO05D005971 7.2e-216 753.8 437 78.7
Aa31LG6G570 Aethionema arabicum HOM05D004850 ORTHO05D005971 1.2e-215 753.1 439 80.2
CARHR224550 Cardamine hirsuta HOM05D004850 ORTHO05D005971 1.2e-215 753.1 437 80.1
Sp7g16280 Schrenkiella parvula HOM05D004850 ORTHO05D005971 1.6e-215 752.7 439 79.7
AL7G36700 Arabidopsis lyrata HOM05D004850 ORTHO05D005971 2.1e-215 752.3 435 79.5
BcaC09g51599 Brassica carinata HOM05D004850 ORTHO05D005971 2.1e-215 752.3 429 80.7
Lalb_Chr05g0213951 Lupinus albus HOM05D004850 ORTHO05D005971 2.1e-215 752.3 437 78.0
Aqoxy3G02383 Aquilegia oxysepala HOM05D004850 ORTHO05D005971 2.8e-215 751.9 437 78.5
A01p09880 Brassica napus HOM05D004850 ORTHO05D005971 2.8e-215 751.9 429 80.9
Phvul.002G007200 Phaseolus vulgaris HOM05D004850 ORTHO05D005971 4.7e-215 751.1 430 79.8
Sabra01G0111700 Salix brachista HOM05D004850 ORTHO05D005971 4.7e-215 751.1 473 74.4
AT4G17830 Arabidopsis thaliana HOM05D004850 ORTHO05D005971 6.1e-215 750.7 438 79.2
Carub.0007s2353 Capsella rubella HOM05D004850 ORTHO05D005971 8.0e-215 750.4 438 79.7
Lj2A240G35 Lonicera japonica HOM05D004850 ORTHO05D005971 2.3e-214 748.8 494 72.5
Psat2g173240 Pisum sativum HOM05D004850 ORTHO05D005971 3.4e-213 745.0 436 78.0
HPP92_001721 Vanilla planifolia HOM05D004850 ORTHO05D005971 4.4e-213 744.6 440 78.2
BraA01t00932Z Brassica rapa HOM05D004850 ORTHO05D005971 2.8e-212 741.9 444 78.2
PSO063G6489 Papaver somniferum HOM05D004850 ORTHO05D005971 8.3e-212 740.3 438 77.9
EL10Ac5g12130 Beta vulgaris HOM05D004850 ORTHO05D005971 5.4e-211 737.6 438 76.9
Oeu006991.2 Olea europaea HOM05D004850 ORTHO05D005971 5.4e-211 737.6 509 70.9
Sc01g0007470 Simmondsia chinensis HOM05D004850 ORTHO05D005971 1.2e-210 736.5 445 77.8
CDE11G0367 Ceratophyllum demersum HOM05D004850 ORTHO05D005971 3.5e-210 734.9 435 77.7
Ah.12g054980 Amaranthus hybridus HOM05D004850 ORTHO05D005971 7.8e-210 733.8 439 77.7
AUR62018722 Chenopodium quinoa HOM05D004850 ORTHO05D005971 2.3e-209 732.3 436 77.5
SGA_v2.0_scaffold20G09279 Striga asiatica HOM05D004850 ORTHO05D005971 1.6e-207 726.1 524 68.7
Psat2g173320 Pisum sativum HOM05D004850 ORTHO05D005971 2.8e-207 725.3 437 76.0
vmacro00333 Vaccinium macrocarpon HOM05D004850 ORTHO05D005971 8.0e-207 723.8 413 81.8
HanXRQChr10g0285061 Helianthus annuus HOM05D004850 ORTHO05D005971 1.8e-206 722.6 433 77.4
Gorai.003G181400 Gossypium raimondii HOM05D004850 ORTHO05D005971 2.9e-204 715.3 409 81.9
Rhsim11G0014400 Rhododendron simsii HOM05D004850 ORTHO05D005971 7.8e-202 707.2 420 79.5
Sabra03G0060800 Salix brachista HOM05D004850 ORTHO05D005971 4.7e-199 698.0 402 79.6
Sopen08g025550 Solanum pennellii HOM05D004850 ORTHO05D005971 1.4e-198 696.4 434 74.9
Dinv28952 Davidia involucrata HOM05D004850 ORTHO05D005971 1.2e-197 693.3 392 82.1
Solyc08g076970.3 Solanum lycopersicum HOM05D004850 ORTHO05D005971 2.0e-197 692.6 437 73.7
DCAR_031774 Daucus carota HOM05D004850 ORTHO05D005971 6.4e-196 687.6 405 77.3
Os02g0690800 Oryza sativa ssp. japonica HOM05D004850 ORTHO05D005971 6.4e-196 687.6 440 72.3
Sopen08g025560 Solanum pennellii HOM05D004850 ORTHO05D005971 4.1e-195 684.9 435 73.8
SMO353G0234 Selaginella moellendorffii HOM05D004850 ORTHO05D005971 5.4e-195 684.5 428 75.0
Zm00001eb251190 Zea mays HOM05D004850 ORTHO05D005971 3.9e-193 678.3 441 70.5
PGSC0003DMG400017513 Solanum tuberosum HOM05D004850 ORTHO05D005971 4.0e-190 668.3 434 72.1
Solyc08g076980.4 Solanum lycopersicum HOM05D004850 ORTHO05D005971 7.5e-189 664.1 438 71.9
AagrBONN_evm.TU.Sc2ySwM_117.1258 Anthoceros agrestis HOM05D004850 ORTHO05D005971 1.6e-186 656.4 426 71.6
MELO3C003400.2 Cucumis melo HOM05D004850 ORTHO05D005971 2.1e-186 656.0 434 70.3
Nn1g00519 Nelumbo nucifera HOM05D004850 ORTHO05D005971 7.8e-186 654.1 438 73.5
Pp3c6_20970 Physcomitrium patens HOM05D004850 ORTHO05D005971 1.9e-184 649.4 435 69.7
Sed0023890 Sechium edule HOM05D004850 ORTHO05D005971 4.7e-183 644.8 437 68.0
Sed0011615 Sechium edule HOM05D004850 ORTHO05D005971 1.4e-182 643.3 437 67.5
ClCG09G012040 Citrullus lanatus HOM05D004850 ORTHO05D005971 2.1e-178 629.4 436 66.3
GSVIVG01013167001 Vitis vinifera HOM05D004850 ORTHO05D005971 7.8e-178 627.5 341 85.0
Mapoly0013s0175 Marchantia polymorpha HOM05D004850 ORTHO05D005971 1.0e-177 627.1 427 68.9
Cc11_g03830 Coffea canephora HOM05D004850 ORTHO05D005971 1.2e-175 620.2 330 86.4
Atru.chr6.1718 Acer truncatum HOM05D004850 ORTHO05D005971 2.0e-173 612.8 339 84.4
ClCG09G012030 Citrullus lanatus HOM05D004850 ORTHO05D005971 9.9e-173 610.5 433 65.8
Cc00_g30170 Coffea canephora HOM05D004850 ORTHO05D005971 4.2e-171 605.1 340 82.9
CBR_g51240 Chara braunii HOM05D004850 ORTHO05D005971 2.4e-166 589.3 432 63.2
AUR62007282 Chenopodium quinoa HOM05D004850 ORTHO05D005971 1.7e-164 583.2 387 71.6
BolC1t01126H Brassica oleracea HOM05D004850 ORTHO05D005971 2.9e-164 582.4 355 77.5
Actinidia28173 Actinidia chinensis HOM05D004850 ORTHO05D005971 7.1e-163 577.8 438 66.7
Cre02.g105500 Chlamydomonas reinhardtii HOM05D004850 ORTHO05D005971 1.0e-161 573.9 426 61.7
MELO3C003399.2 Cucumis melo HOM05D004850 ORTHO05D005971 2.5e-160 569.3 441 60.5
CsaV3_3G049280 Cucumis sativus L. HOM05D004850 ORTHO05D005971 2.1e-159 566.2 441 59.6
MELO3C003398.2 Cucumis melo HOM05D004850 ORTHO05D005971 8.1e-159 564.3 439 62.0
QL12p005631 Quercus lobata HOM05D004850 ORTHO05D005971 3.3e-152 542.3 293 84.3
SMO116G0259 Selaginella moellendorffii HOM05D004850 ORTHO05D005971 1.9e-147 526.6 435 58.9
ClCG09G012020 Citrullus lanatus HOM05D004850 ORTHO05D005971 1.1e-139 500.7 351 67.0
CsaV3_3G049270 Cucumis sativus L. HOM05D004850 ORTHO05D005971 2.5e-139 499.6 337 69.1
C01p11580 Brassica napus HOM05D004850 ORTHO05D005971 2.1e-138 496.5 381 65.1
MCO07G613 Micromonas commoda HOM05D004850 ORTHO05D005971 2.0e-125 453.4 432 51.2
MD06G1033200 Malus domestica HOM05D004850 ORTHO05D005971 5.3e-110 402.1 352 58.2
Glyma.01G198600 Glycine max HOM05D004850 ORTHO05D005971 2.0e-104 383.6 242 74.0
Nitab4.5_0008181g0010 Nicotiana tabacum HOM05D004850 ORTHO05D005971 2.2e-103 380.2 223 79.8
arahy.Tifrunner.gnm1.ann1.XXZT2J Arachis hypogaea HOM05D004850 ORTHO05D005971 3.2e-94 349.7 228 71.9
SHI07365 Sapria himalayana HOM05D004850 ORTHO05D005971 1.3e-76 291.2 189 70.9
Sc02g0006900 Simmondsia chinensis HOM05D004850 ORTHO05D005971 8.9e-73 278.5 157 82.8
Cc08_g02610 Coffea canephora HOM05D004850 ORTHO05D005971 6.4e-71 272.3 145 86.9
Sc03g0003930 Simmondsia chinensis HOM05D004850 ORTHO05D005971 2.4e-70 270.4 176 69.9
HPP92_001566 Vanilla planifolia HOM05D004850 ORTHO05D005971 1.7e-68 264.2 197 67.0
FAN04G0574 Fragaria x ananassa HOM05D004850 ORTHO05D005971 4.6e-61 239.6 134 82.1
Actinidia25960 Actinidia chinensis HOM05D004850 ORTHO05D005971 9.0e-57 225.3 233 54.9
Sc22g0003360 Simmondsia chinensis HOM05D004850 ORTHO05D005971 6.9e-49 199.1 113 79.6
SEGI_04366 Sequoiadendron giganteum HOM05D004850 ORTHO05D005971 7.6e-48 195.7 107 78.5
BcaNung00053 Brassica carinata HOM05D004850 ORTHO05D005971 9.6e-43 178.7 136 65.4
Sc22g0003350 Simmondsia chinensis HOM05D004850 ORTHO05D005971 2.5e-35 154.1 88 80.7
arahy.Tifrunner.gnm1.ann1.RD5L31 Arachis hypogaea HOM05D004850 ORTHO05D005971 2.1e-34 151.0 93 75.3
arahy.Tifrunner.gnm1.ann1.MBF31G Arachis hypogaea HOM05D004850 ORTHO05D005971 1.2e-32 145.2 165 48.5
SEGI_19032 Sequoiadendron giganteum HOM05D004850 ORTHO05D005971 2.9e-31 140.6 82 80.5
MD02G1199500 Malus domestica HOM05D004850 ORTHO05D048674 7.2e-30 136.0 204 37.7
SMO116G0465 Selaginella moellendorffii HOM05D004850 ORTHO05D005971 1.0e-23 115.5 258 34.5
SHI07370 Sapria himalayana HOM05D004850 ORTHO05D005971 2.9e-23 114.0 67 73.1
Hma1.2p1_0090F.1_g045780 Hydrangea macrophylla HOM05D004850 ORTHO05D005971 1.9e-22 111.3 85 62.4
Cc06_g05830 Coffea canephora HOM05D004850 ORTHO05D005971 1.4e-20 105.1 63 79.4
SHI07376 Sapria himalayana HOM05D004850 ORTHO05D005971 6.7e-20 102.8 65 67.7
MD15G1380000 Malus domestica HOM05D004850 ORTHO05D048674 3.3e-19 100.5 57 71.9
arahy.Tifrunner.gnm1.ann1.00HL0A Arachis hypogaea HOM05D004850 ORTHO05D004353 4.5e-16 90.1 118 44.9
Lsat_1_v5_gn_9_53361 Lactuca sativa HOM05D003461 ORTHO05D004386 1.0e-12 79.0 97 45.4
Lsat_1_v5_gn_4_90040 Lactuca sativa HOM05D003461 ORTHO05D004386 6.7e-12 76.3 38 81.6
AUR62007284 Chenopodium quinoa HOM05D000077 ORTHO05D014281 5.7e-11 73.2 47 70.2
Lsat_1_v5_gn_8_141060 Lactuca sativa HOM05D003461 ORTHO05D004386 2.4e-09 67.8 98 42.9
SMO353G0042 Selaginella moellendorffii HOM05D019014 ORTHO05D379427 5.9e-08 63.2 69 50.7
SHI07377 Sapria himalayana HOM05D004850 ORTHO05D005971 1.0e-07 62.4 35 74.3
Duzib235G1016 Durio zibethinus HOM05D000617 ORTHO05D000478 1.5e-06 58.5 249 26.1
Hma1.2p1_2649F.1_g326132 Hydrangea macrophylla HOM05D000617 ORTHO05D000478 2.5e-06 57.8 224 23.7


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