Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 5.1e-94 349.7 715 100.0
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 2.1e-31 141.7 157 51.6
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 4.4e-29 134.0 153 47.7
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 3.8e-28 131.0 160 45.0
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 8.4e-28 129.8 157 46.5
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 1.4e-27 129.0 148 49.3
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 3.5e-26 124.4 161 43.5
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 4.6e-26 124.0 172 44.8
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 1.3e-25 122.5 157 45.9
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.9e-25 120.9 148 45.3
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.5e-24 119.0 143 44.8
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 1.5e-24 119.0 164 43.9
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 1.9e-24 118.6 135 48.1
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 2.5e-24 118.2 144 42.4
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.3e-24 117.9 148 44.6
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.3e-24 117.9 148 44.6
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 3.3e-24 117.9 165 41.8
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 5.6e-24 117.1 164 42.7
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 7.3e-24 116.7 150 45.3
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 9.6e-24 116.3 169 44.4
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 1.3e-23 115.9 169 43.2
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 1.3e-23 115.9 164 43.3
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.6e-23 115.5 159 44.0
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 3.6e-23 114.4 170 45.3
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 3.6e-23 114.4 150 44.7
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.8e-23 114.0 169 43.8
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 4.8e-23 114.0 176 42.0
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 6.2e-23 113.6 149 45.0
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 8.1e-23 113.2 151 44.4
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 1.1e-22 112.8 148 41.2
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 1.4e-22 112.5 149 45.0
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 6.9e-22 110.2 155 43.2
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 9.0e-22 109.8 164 41.5
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 1.5e-21 109.0 150 42.7
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 2.6e-21 108.2 144 40.3
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.6e-21 108.2 125 46.4
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.4e-21 107.8 161 44.1
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.4e-21 107.8 161 44.7
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 5.8e-21 107.1 149 40.9
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 1.3e-20 105.9 154 40.3
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 1.7e-20 105.5 160 44.4
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 3.8e-20 104.4 155 40.0
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.4e-20 103.6 169 39.1
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.4e-20 103.6 169 39.1
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 8.4e-20 103.2 144 38.9
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.9e-19 102.1 143 40.6
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.4e-19 101.7 168 38.1
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 4.2e-19 100.9 173 38.2
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 5.4e-19 100.5 173 39.3
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 7.1e-19 100.1 143 39.2
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.3e-19 99.8 168 39.9
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 9.3e-19 99.8 168 39.9
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-18 99.4 164 38.4
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 1.2e-18 99.4 176 36.9
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 3.5e-18 97.8 131 42.0
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 4.6e-18 97.4 140 41.4
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 6.0e-18 97.1 145 36.6
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.3e-17 95.1 169 38.5
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 2.3e-17 95.1 143 42.0
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 2.3e-17 95.1 82 54.9
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 3.0e-17 94.7 143 41.3
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 3.0e-17 94.7 143 41.3
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 3.9e-17 94.4 163 38.7
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 3.9e-17 94.4 174 41.4
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.6e-17 93.6 162 37.7
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 6.6e-17 93.6 118 46.6
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 1.1e-16 92.8 143 40.6
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.9e-16 92.0 164 36.6
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 3.3e-16 91.3 110 42.7
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 3.3e-16 91.3 166 38.0
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 3.3e-16 91.3 166 34.9
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 5.6e-16 90.5 173 36.4
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 7.3e-16 90.1 132 38.6
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-15 89.4 135 39.3
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.3e-15 89.4 163 36.2
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 1.6e-15 89.0 96 45.8
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 6.2e-15 87.0 151 39.7
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.1e-15 86.7 166 36.7
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.1e-15 86.7 166 36.7
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 8.1e-15 86.7 142 38.7
MSTRG.18464 Avicennia marina HOM05D006694 ORTHO05D008240 6.9e-14 83.6 154 34.4
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.0e-13 82.0 161 35.4
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.0e-13 82.0 161 35.4
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 5.8e-13 80.5 83 48.2
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 7.6e-13 80.1 136 36.8
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 1.7e-12 79.0 152 38.8
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 4.9e-12 77.4 118 41.5
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 1.1e-11 76.3 86 43.0
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 7.1e-11 73.6 151 32.5
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 1.2e-10 72.8 83 45.8
Manes.01G178400 Manihot esculenta HOM05D006694 ORTHO05D008240 5.1e-09 67.4 71 57.7
DCAR_024407 Daucus carota HOM05D006694 ORTHO05D008240 6.7e-09 67.0 91 37.4
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 6.7e-09 67.0 160 27.5
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 8.7e-09 66.6 103 33.0
Potri.009G069600 Populus trichocarpa HOM05D006694 ORTHO05D008240 1.5e-08 65.9 76 46.1
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 2.5e-08 65.1 126 31.7
ATR1128G092 Amborella trichopoda HOM05D006694 ORTHO05D008240 2.5e-08 65.1 117 34.2
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.3e-08 64.3 140 34.3
RcHm_v2.0_Chr7g0231581 Rosa chinensis HOM05D006694 ORTHO05D008240 5.6e-08 63.9 98 45.9
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.3e-07 62.8 140 28.6
ECA238G0309 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.3e-07 62.8 82 39.0
Glyma.09G263602 Glycine max HOM05D000162 ORTHO05D000090 2.8e-07 61.6 140 27.1
MD15G1399800 Malus domestica HOM05D006694 ORTHO05D008240 2.8e-07 61.6 74 50.0
Sabra09G0052500 Salix brachista HOM05D006694 ORTHO05D008240 4.8e-07 60.8 75 44.0
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 6.2e-07 60.5 88 40.9
MBI11_g34855_MAGBIO Magnolia biondii HOM05D000162 ORTHO05D000090 6.2e-07 60.5 161 30.4
RcHm_v2.0_Chr4g0414121 Rosa chinensis HOM05D000162 ORTHO05D000090 8.1e-07 60.1 142 26.8
Atru.chr3.2947 Acer truncatum HOM05D006694 ORTHO05D008240 2.4e-06 58.5 67 49.3
Atru.chr3.2963 Acer truncatum HOM05D006694 ORTHO05D008240 2.4e-06 58.5 67 49.3
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 2.4e-06 58.5 114 28.1


User provided reference genes

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