Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 2.3e-182 642.1 324 100.0
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.8e-121 438.7 282 77.0
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 3.9e-118 428.7 304 72.0
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.1e-117 427.2 282 75.5
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 2.6e-117 426.0 282 75.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 1.7e-116 423.3 285 75.1
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.0e-114 416.4 296 70.9
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 2.6e-114 416.0 303 71.3
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 5.0e-113 411.8 299 71.2
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 4.2e-112 408.7 289 72.7
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 3.6e-111 405.6 303 70.6
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.0e-110 404.1 310 69.4
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 5.2e-110 401.7 292 70.2
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 5.2e-110 401.7 299 69.9
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 5.2e-110 401.7 299 69.2
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 5.2e-110 401.7 297 70.0
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 6.8e-110 401.4 290 71.4
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 3.4e-109 399.1 272 72.1
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 5.7e-109 398.3 297 67.7
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 5.7e-109 398.3 301 69.1
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 9.7e-109 397.5 276 73.9
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 8.3e-108 394.4 300 69.3
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.1e-107 394.0 265 74.3
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 1.4e-107 393.7 296 68.9
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 4.1e-107 392.1 302 66.9
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 4.1e-107 392.1 302 66.9
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 4.1e-107 392.1 305 69.2
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 5.3e-107 391.7 302 67.5
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 5.3e-107 391.7 300 68.0
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 7.0e-107 391.3 303 68.3
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.2e-106 390.6 281 71.2
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.2e-106 390.6 302 68.5
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.2e-106 390.6 296 69.3
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 4.5e-106 388.7 283 70.3
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 4.5e-106 388.7 295 69.5
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 5.9e-106 388.3 279 69.9
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-105 387.1 295 71.2
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 2.2e-105 386.3 280 72.5
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 3.8e-105 385.6 296 68.9
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 6.5e-105 384.8 286 70.6
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 8.5e-105 384.4 319 63.9
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.1e-104 384.0 294 70.1
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.9e-104 383.3 277 70.0
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 4.2e-104 382.1 294 69.0
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 5.5e-104 381.7 297 68.4
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 5.5e-104 381.7 295 67.8
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 5.5e-104 381.7 359 58.5
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 7.2e-104 381.3 281 67.3
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 1.2e-103 380.6 295 69.8
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 2.1e-103 379.8 285 66.7
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 2.7e-103 379.4 305 64.6
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 3.6e-103 379.0 283 67.5
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 4.7e-103 378.6 272 68.0
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 6.1e-103 378.3 290 66.6
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 1.4e-102 377.1 303 64.7
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.8e-102 376.7 283 67.5
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 3.0e-102 375.9 267 69.3
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 4.0e-102 375.6 284 66.9
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 6.8e-102 374.8 254 74.4
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 6.8e-102 374.8 281 68.3
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 8.8e-102 374.4 326 63.2
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.0e-101 373.2 278 69.1
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 2.0e-101 373.2 299 67.2
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 4.4e-101 372.1 278 68.0
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 7.5e-101 371.3 306 64.7
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 9.8e-101 370.9 318 64.5
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 6.3e-100 368.2 296 67.6
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 1.8e-99 366.7 276 65.6
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 3.1e-99 365.9 318 63.5
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 4.1e-99 365.5 281 69.8
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 5.4e-99 365.2 330 61.8
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 7.0e-99 364.8 312 62.8
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 1.6e-98 363.6 290 67.6
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 1.7e-97 360.1 295 64.4
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 5.0e-97 358.6 283 67.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 6.6e-97 358.2 314 61.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.9e-96 356.7 290 67.9
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 3.3e-96 355.9 298 63.4
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 4.2e-96 355.5 269 68.0
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 7.2e-96 354.8 311 62.1
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 9.5e-96 354.4 287 64.8
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 1.6e-95 353.6 287 65.2
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 8.0e-95 351.3 326 60.4
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 4.4e-93 345.5 277 62.5
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 2.2e-92 343.2 261 67.4
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.2e-90 337.4 317 58.4
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 2.3e-89 333.2 284 64.1
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.2e-87 327.4 277 62.8
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 2.1e-87 326.6 285 59.6
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 8.9e-86 321.2 298 59.7
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.0e-85 320.1 290 63.4
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 2.0e-85 320.1 292 63.4
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 3.7e-84 315.8 280 60.0
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 8.6e-81 304.7 303 54.5
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 7.3e-80 301.6 302 56.3
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.2e-79 300.8 226 65.5
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.1e-78 296.2 227 66.1
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 1.1e-72 277.7 291 54.6
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 3.2e-67 259.6 203 66.5
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.4e-67 258.8 195 66.2
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.7e-66 256.5 186 69.9
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 9.9e-61 238.0 295 48.1
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.3e-60 237.7 141 80.1
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 1.1e-59 234.6 180 67.2
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 1.9e-59 233.8 301 45.2
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.3e-57 227.6 153 71.9
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.7e-57 227.3 178 67.4
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 1.8e-54 217.2 284 45.1
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 5.1e-49 199.1 124 79.0
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.9e-48 197.2 159 66.0
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 5.6e-48 195.7 145 71.0
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 2.8e-47 193.4 307 40.4
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 8.1e-47 191.8 290 42.4
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 1.1e-46 191.4 157 63.7
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 2.4e-46 190.3 308 37.3
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.4e-43 181.0 310 36.5
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.6e-42 177.6 141 66.7
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.3e-36 157.9 143 58.7
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 3.3e-32 143.3 104 71.2
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 8.2e-31 138.7 106 68.9
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.1e-30 138.3 136 58.8
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 1.0e-28 131.7 89 68.5
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.6e-26 124.4 108 63.0
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 2.5e-24 117.1 90 71.1
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.7e-24 115.9 87 73.6
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.8e-22 110.9 80 72.5
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 1.9e-19 100.9 234 33.8
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.9e-19 100.9 108 55.6
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 7.9e-18 95.5 149 43.6
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 5.1e-17 92.8 233 32.2
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 1.1e-16 91.7 106 51.9
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 5.9e-13 79.3 91 51.6
Actinidia12444 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.4e-06 57.4 36 75.0
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 7.0e-06 55.8 250 23.6


User provided reference genes

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