Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR028G0009 Punica granatum HOM05D006320 ORTHO05D007069 3.7e-43 177.9 100 100.0
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 5.1e-32 141.0 90 88.9
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 5.1e-32 141.0 90 88.9
Sed0021840 Sechium edule HOM05D006320 ORTHO05D007069 4.0e-29 131.3 79 94.9
CsaV3_UNG209120 Cucumis sativus L. HOM05D006320 ORTHO05D007069 9.0e-29 130.2 78 94.9
CARHR287930 Cardamine hirsuta HOM05D006320 ORTHO05D007069 1.2e-28 129.8 74 98.6
AL5G20340 Arabidopsis lyrata HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
AT2G07671 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
ATMG01080 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
BolSC28t60384H Brassica oleracea HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
BolSC28t60392H Brassica oleracea HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
BolSC28t60418H Brassica oleracea HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
BraSC224t45817Z Brassica rapa HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
Thhalv10023008m.g Eutrema salsugineum HOM05D006320 ORTHO05D007069 1.5e-28 129.4 74 97.3
RcHm_v2.0_MTg0498361 Rosa chinensis HOM05D006320 ORTHO05D007069 1.5e-28 129.4 75 96.0
CANSAT16G0023 Cannabis sativa HOM05D006320 ORTHO05D007069 3.4e-28 128.3 79 92.4
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 2.2e-27 125.6 78 92.3
arahy.Tifrunner.gnm1.ann1.5U23EP Arachis hypogaea HOM05D006320 ORTHO05D007069 2.9e-27 125.2 74 97.3
arahy.Tifrunner.gnm1.ann1.YTYD5C Arachis hypogaea HOM05D006320 ORTHO05D007069 2.9e-27 125.2 74 97.3
Lalb_Chr00c24g0406831 Lupinus albus HOM05D006320 ORTHO05D007069 2.9e-27 125.2 74 97.3
Lalb_Chr11g0070071 Lupinus albus HOM05D006320 ORTHO05D007069 2.9e-27 125.2 74 97.3
Phvul.005G088454 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 2.9e-27 125.2 74 97.3
RhsimMtG0004200 Rhododendron simsii HOM05D006320 ORTHO05D007069 3.8e-27 124.8 79 89.9
Hund27557 Selenicereus undatus HOM05D001750 ORTHO05D007069 4.9e-27 124.4 76 94.7
Sc08g0004920 Simmondsia chinensis HOM05D006320 ORTHO05D007069 6.4e-27 124.0 90 81.1
BolC1t03457H Brassica oleracea HOM05D006320 ORTHO05D007069 8.4e-27 123.6 82 87.8
C01p34910 Brassica napus HOM05D006320 ORTHO05D007069 1.1e-26 123.2 94 76.6
ECA041G0001 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.4e-26 122.9 97 75.3
Aa31sc483G20 Aethionema arabicum HOM05D006320 ORTHO05D007069 1.9e-26 122.5 74 95.9
Hma1.2p1_1191F.1_g265490 Hydrangea macrophylla HOM05D006320 ORTHO05D007069 2.4e-26 122.1 74 94.6
Ah.10g028420 Amaranthus hybridus HOM05D006320 ORTHO05D007069 3.2e-26 121.7 76 92.1
ECA234G4202 Erigeron canadensis HOM05D006320 ORTHO05D007069 3.2e-26 121.7 79 87.3
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 3.2e-26 121.7 79 87.3
Lsat_1_v5_gn_8_111781 Lactuca sativa HOM05D006320 ORTHO05D007069 3.2e-26 121.7 79 87.3
LjContig00439g0017906 Lotus japonicus HOM05D006320 ORTHO05D007069 4.2e-26 121.3 74 94.6
LjContig00446g0026709 Lotus japonicus HOM05D006320 ORTHO05D007069 4.2e-26 121.3 74 94.6
CDE02G4101 Ceratophyllum demersum HOM05D006320 ORTHO05D007069 5.4e-26 120.9 78 89.7
C01p34830 Brassica napus HOM05D006320 ORTHO05D007069 7.1e-26 120.6 72 93.1
Phvul.011G124000 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 1.2e-25 119.8 74 93.2
CANSAT21G1924 Cannabis sativa HOM05D006320 ORTHO05D007069 4.6e-25 117.9 76 89.5
AUR62042330 Chenopodium quinoa HOM05D006320 ORTHO05D007069 6.0e-25 117.5 78 88.5
GSVIVG01029662001 Vitis vinifera HOM05D006320 ORTHO05D007069 6.0e-25 117.5 82 82.9
Aqoxy12s033 Aquilegia oxysepala HOM05D006320 ORTHO05D007069 7.8e-25 117.1 74 90.5
SalBow1G1899 Salvia bowleyana HOM05D006320 ORTHO05D007069 1.0e-24 116.7 74 91.9
arahy.Tifrunner.gnm1.ann1.XSHW5Z Arachis hypogaea HOM05D006320 ORTHO05D007069 1.3e-24 116.3 68 97.1
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 1.3e-24 116.3 75 89.3
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 1.7e-24 115.9 76 86.8
Nitab4.5_0002326g0030 Nicotiana tabacum HOM05D006320 ORTHO05D007069 2.3e-24 115.5 75 86.7
SHI40315 Sapria himalayana HOM05D006320 ORTHO05D007069 2.3e-24 115.5 74 90.5
Lalb_Chr10g0093911 Lupinus albus HOM05D006320 ORTHO05D007069 3.0e-24 115.2 74 90.5
Nitab4.5_0000172g0580 Nicotiana tabacum HOM05D006320 ORTHO05D007069 3.0e-24 115.2 75 86.7
Gohir.D07G024400 Gossypium hirsutum HOM05D006320 ORTHO05D007069 5.1e-24 114.4 75 88.0
SHI36772 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-23 113.2 75 86.7
SHI36783 Sapria himalayana HOM05D000743 ORTHO05D000580 1.1e-23 113.2 75 86.7
SHI36586 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-23 112.8 74 86.5
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 2.5e-23 112.1 97 70.1
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 9.6e-23 110.2 79 81.0
Psat1g120760 Pisum sativum HOM05D012609 ORTHO05D007069 3.6e-22 108.2 67 92.5
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 3.6e-22 108.2 97 68.0
SHI39988 Sapria himalayana HOM05D006320 ORTHO05D007069 3.6e-22 108.2 71 88.7
SHI54307 Sapria himalayana HOM05D006320 ORTHO05D007069 3.6e-22 108.2 71 88.7
SHI39753 Sapria himalayana HOM05D006320 ORTHO05D007069 4.8e-22 107.8 71 88.7
Sopen12g013690 Solanum pennellii HOM05D006320 ORTHO05D007069 4.8e-22 107.8 75 84.0
PGSC0003DMG400002202 Solanum tuberosum HOM05D006320 ORTHO05D007069 4.8e-22 107.8 68 89.7
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 6.2e-22 107.5 97 68.0
SHI35484 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-21 106.7 71 88.7
SHI38846 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-21 106.7 71 85.9
Sc08g0004610 Simmondsia chinensis HOM05D006320 ORTHO05D007069 1.1e-21 106.7 90 73.3
SHI48649 Sapria himalayana HOM05D006320 ORTHO05D007069 1.4e-21 106.3 71 87.3
SHI15099 Sapria himalayana HOM05D006320 ORTHO05D007069 1.8e-21 105.9 68 91.2
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-21 105.9 96 68.8
SHI35237 Sapria himalayana HOM05D006320 ORTHO05D007069 3.1e-21 105.1 71 85.9
SHI46360 Sapria himalayana HOM05D006320 ORTHO05D007069 3.1e-21 105.1 71 85.9
SHI53429 Sapria himalayana HOM05D006320 ORTHO05D007069 4.0e-21 104.8 71 87.3
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 6.9e-21 104.0 71 83.1
CAN.G547.1 Capsicum annuum HOM05D006320 ORTHO05D007069 2.0e-20 102.4 66 87.9
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 2.0e-20 102.4 74 79.7
SHI34625 Sapria himalayana HOM05D000743 ORTHO05D000580 2.6e-20 102.1 96 66.7
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-20 102.1 79 77.2
SHI37852 Sapria himalayana HOM05D006320 ORTHO05D007069 3.4e-20 101.7 74 82.4
SHI53047 Sapria himalayana HOM05D006320 ORTHO05D007069 3.4e-20 101.7 71 84.5
Nitab4.5_0001152g0710 Nicotiana tabacum HOM05D006320 ORTHO05D007069 7.6e-20 100.5 70 80.0
SalBow6G3944 Salvia bowleyana HOM05D006320 ORTHO05D007069 9.9e-20 100.1 73 82.2
SHI27343 Sapria himalayana HOM05D006320 ORTHO05D007069 1.7e-19 99.4 71 83.1
SGA_v2.0_scaffold255G45504 Striga asiatica HOM05D006320 ORTHO05D007069 1.7e-19 99.4 60 93.3
SalBow8G4348 Salvia bowleyana HOM05D006320 ORTHO05D007069 2.2e-19 99.0 74 82.4
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 2.9e-19 98.6 63 87.3
SHI49662 Sapria himalayana HOM05D006320 ORTHO05D007069 3.8e-19 98.2 71 84.5
SHI50161 Sapria himalayana HOM05D006320 ORTHO05D007069 3.8e-19 98.2 71 83.1
SHI52535 Sapria himalayana HOM05D006320 ORTHO05D007069 6.4e-19 97.4 65 84.6
SHI42051 Sapria himalayana HOM05D006320 ORTHO05D007069 8.4e-19 97.1 71 81.7
SHI41242 Sapria himalayana HOM05D006320 ORTHO05D007069 1.4e-18 96.3 70 82.9
SEGI_10818 Sequoiadendron giganteum HOM05D006320 ORTHO05D007069 1.4e-18 96.3 82 72.0
Nitab4.5_0002418g0080 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.9e-18 95.9 74 73.0
SHI36574 Sapria himalayana HOM05D006320 ORTHO05D007069 2.4e-18 95.5 62 88.7
SHI39076 Sapria himalayana HOM05D006320 ORTHO05D007069 3.2e-18 95.1 71 80.3
SHI37138 Sapria himalayana HOM05D006320 ORTHO05D007069 4.2e-18 94.7 65 83.1
SHI34993 Sapria himalayana HOM05D006320 ORTHO05D007069 7.1e-18 94.0 62 87.1
SHI49633 Sapria himalayana HOM05D006320 ORTHO05D007069 9.3e-18 93.6 65 81.5
SHI35481 Sapria himalayana HOM05D000890 ORTHO05D007069 1.2e-17 93.2 58 91.4
Lsat_1_v5_gn_7_80061 Lactuca sativa HOM05D006320 ORTHO05D007069 1.6e-17 92.8 75 72.0
CiPaw.06G021700 Carya illinoinensis HOM05D006320 ORTHO05D007069 2.1e-17 92.4 61 83.6
SHI38465 Sapria himalayana HOM05D000743 ORTHO05D000580 2.1e-17 92.4 103 60.2
SHI50287 Sapria himalayana HOM05D006320 ORTHO05D007069 2.7e-17 92.0 61 85.2
CAN.G761.5 Capsicum annuum HOM05D012609 ORTHO05D007069 3.5e-17 91.7 63 84.1
SHI51203 Sapria himalayana HOM05D006320 ORTHO05D007069 4.6e-17 91.3 59 88.1
SHI39778 Sapria himalayana HOM05D006320 ORTHO05D007069 7.9e-17 90.5 62 85.5
SHI47782 Sapria himalayana HOM05D006320 ORTHO05D007069 1.0e-16 90.1 59 86.4
SHI47632 Sapria himalayana HOM05D006320 ORTHO05D007069 1.8e-16 89.4 59 86.4
SHI37168 Sapria himalayana HOM05D006320 ORTHO05D007069 3.0e-16 88.6 65 80.0
SHI40933 Sapria himalayana HOM05D000743 ORTHO05D000580 5.1e-16 87.8 61 82.0
SHI38101 Sapria himalayana HOM05D000743 ORTHO05D000580 6.7e-16 87.4 59 83.1
SHI36370 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-15 86.7 61 83.6
SHI41650 Sapria himalayana HOM05D000743 ORTHO05D000580 9.6e-15 83.6 82 64.6
Nitab4.5_0000172g1200 Nicotiana tabacum HOM05D007924 ORTHO05D007069 4.8e-14 81.3 72 66.7
Haze_26208 Corylus avellana HOM05D006320 ORTHO05D007069 1.8e-13 79.3 70 64.3
Haze_26209 Corylus avellana HOM05D006320 ORTHO05D007069 1.8e-13 79.3 70 64.3
SHI36078 Sapria himalayana HOM05D000743 ORTHO05D007069 3.1e-13 78.6 72 65.3
Cre17.g731950 Chlamydomonas reinhardtii HOM05D006320 ORTHO05D007069 5.3e-13 77.8 72 59.7
Cre17.g732000 Chlamydomonas reinhardtii HOM05D006320 ORTHO05D007069 5.3e-13 77.8 72 59.7
SHI25012 Sapria himalayana HOM05D006320 ORTHO05D007069 5.3e-13 77.8 74 64.9
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 1.5e-12 76.3 49 89.8
Nitab4.5_0005246g0040 Nicotiana tabacum HOM05D007924 ORTHO05D007069 1.5e-12 76.3 74 62.2
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-12 76.3 72 62.5
TAR022G0003 Trochodendron aralioides HOM05D006320 ORTHO05D007069 2.6e-12 75.5 72 62.5
CiPaw.04G019500 Carya illinoinensis HOM05D006320 ORTHO05D007069 3.4e-12 75.1 77 63.6
Manes.04G128250 Manihot esculenta HOM05D006320 ORTHO05D007069 3.4e-12 75.1 46 93.5
HanXRQChr08g0236091 Helianthus annuus HOM05D006320 ORTHO05D007069 4.5e-12 74.7 74 66.2
HanXRQMTg0579331 Helianthus annuus HOM05D006320 ORTHO05D007069 4.5e-12 74.7 74 66.2
ATMG00040 Arabidopsis thaliana HOM05D010793 ORTHO05D011945 5.8e-12 74.3 104 51.0
CARHR282610 Cardamine hirsuta HOM05D010793 ORTHO05D011945 5.8e-12 74.3 104 51.0
Nitab4.5_0002404g0040 Nicotiana tabacum HOM05D006320 ORTHO05D007069 5.8e-12 74.3 75 64.0
SHI39478 Sapria himalayana HOM05D006320 ORTHO05D007069 5.8e-12 74.3 53 79.2
Nitab4.5_0000172g1000 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.3e-11 73.2 68 66.2
Peaxi162Scf00828g00512 Petunia axillaris HOM05D006320 ORTHO05D007069 1.3e-11 73.2 49 81.6
Peaxi162Scf03787g00001 Petunia axillaris HOM05D006320 ORTHO05D007069 1.3e-11 73.2 49 81.6
HanXRQChr16g0504511 Helianthus annuus HOM05D006320 ORTHO05D007069 1.7e-11 72.8 73 65.8
Nitab4.5_0001152g0490 Nicotiana tabacum HOM05D006320 ORTHO05D007069 2.2e-11 72.4 69 65.2
C04p27420 Brassica napus HOM05D006320 ORTHO05D007069 4.9e-11 71.2 47 85.1
EL10Ac6g14143 Beta vulgaris HOM05D010007 ORTHO05D007069 1.4e-10 69.7 47 87.2
SHI51623 Sapria himalayana HOM05D006320 ORTHO05D007069 1.4e-10 69.7 48 83.3
Lsat_1_v5_gn_3_89840 Lactuca sativa HOM05D006320 ORTHO05D007069 4.2e-10 68.2 54 72.2
Dinv06726 Davidia involucrata HOM05D006320 ORTHO05D007069 9.3e-10 67.0 41 87.8
Os01g0899275 Oryza sativa ssp. japonica HOM05D006320 ORTHO05D007069 2.7e-09 65.5 40 90.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 4.6e-09 64.7 63 65.1
Nitab4.5_0005853g0090 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.3e-08 63.2 51 66.7
Os01g0899350 Oryza sativa ssp. japonica HOM05D006320 ORTHO05D007069 3.0e-08 62.0 40 85.0
Peaxi162Scf00446g00053 Petunia axillaris HOM05D006320 ORTHO05D007069 3.0e-08 62.0 42 78.6
Haze_27774 Corylus avellana HOM05D006320 ORTHO05D007069 5.1e-08 61.2 71 46.5
Haze_27775 Corylus avellana HOM05D006320 ORTHO05D007069 5.1e-08 61.2 71 46.5
Nitab4.5_0010033g0150 Nicotiana tabacum HOM05D006320 ORTHO05D007069 6.7e-08 60.8 43 79.1
Mapoly3785s0001 Marchantia polymorpha HOM05D006320 ORTHO05D007069 8.7e-08 60.5 70 54.3
TAR424G0002 Trochodendron aralioides HOM05D006320 ORTHO05D007069 1.9e-07 59.3 58 58.6
SHI31532 Sapria himalayana HOM05D006320 ORTHO05D007069 5.7e-07 57.8 45 71.1
ClCG08G001280 Citrullus lanatus HOM05D006320 ORTHO05D007069 7.4e-07 57.4 38 86.8
Solyc10g049590.1 Solanum lycopersicum HOM05D000216 ORTHO05D007069 7.4e-07 57.4 41 80.5
Nitab4.5_0000859g0030 Nicotiana tabacum HOM05D006604 ORTHO05D007974 2.1e-06 55.8 36 83.3


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