Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.3e-33 144.4 72 100.0
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.4e-28 129.0 72 84.7
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.2e-28 127.9 72 86.1
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.2e-28 127.5 72 83.3
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.2e-28 127.5 72 83.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 5.5e-28 127.1 72 84.7
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.3e-28 126.3 72 84.7
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 9.3e-28 126.3 72 84.7
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 84.7
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.6e-27 125.6 72 84.7
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 80.6
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 86.1
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 86.1
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 86.1
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 86.1
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 4.6e-27 124.0 72 80.6
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 7.9e-27 123.2 72 81.9
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.0e-26 122.9 71 78.9
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 80.6
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 84.7
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 80.6
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 80.6
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 81.9
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 84.7
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.3e-26 121.7 73 83.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 2.3e-26 121.7 72 80.6
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.0e-26 121.3 69 81.2
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 3.0e-26 121.3 72 79.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 84.7
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 80.6
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 80.6
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 5.1e-26 120.6 73 82.2
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 83.3
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.1e-26 120.6 72 79.2
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 6.7e-26 120.2 70 81.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 6.7e-26 120.2 72 80.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 6.7e-26 120.2 71 80.3
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 80.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 8.7e-26 119.8 71 78.9
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 79.2
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.1e-25 119.4 72 79.2
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 80.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.9e-25 118.6 69 78.3
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 79.2
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 77.8
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 5.7e-25 117.1 72 80.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 79.2
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 7.4e-25 116.7 69 79.7
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 9.6e-25 116.3 69 79.7
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 75.0
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 78.3
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.6e-24 115.5 69 78.3
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.6e-24 115.5 70 74.3
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 76.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 1.6e-24 115.5 72 77.8
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 2.1e-24 115.2 69 78.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 2.1e-24 115.2 72 76.4
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 2.8e-24 114.8 69 81.2
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 3.7e-24 114.4 75 78.7
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 6.2e-24 113.6 62 82.3
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 6.2e-24 113.6 66 80.3
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.1e-23 112.8 69 76.8
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.1e-23 111.3 69 73.9
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.1e-23 111.3 69 73.9
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 4.0e-23 110.9 82 69.5
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 6.9e-23 110.2 69 72.5
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.9e-23 110.2 68 76.5
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 6.9e-23 110.2 71 73.2
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.2e-22 109.4 69 72.5
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.2e-22 109.4 71 78.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.0e-22 108.6 61 82.0
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 4.5e-22 107.5 85 68.2
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.0e-21 106.3 65 75.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.0e-21 106.3 101 58.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 1.3e-21 105.9 60 81.7
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.3e-21 105.9 69 71.0
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.2e-21 105.1 62 79.0
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 2.9e-21 104.8 69 69.6
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.0e-21 104.0 82 65.9
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.1e-20 102.8 72 66.7
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.4e-20 102.4 69 73.9
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 5.5e-20 100.5 72 72.2
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 4.6e-19 97.4 72 69.4
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.8e-18 95.5 72 68.1
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 8.7e-18 93.2 137 43.8
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 3.3e-17 91.3 61 68.9
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 4.3e-17 90.9 70 64.3
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 4.3e-17 90.9 69 63.8
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 5.7e-17 90.5 131 42.7
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.6e-16 89.0 52 82.7
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 3.1e-15 84.7 51 76.5
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.2e-14 82.8 50 80.0
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 3.2e-12 74.7 69 56.5
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 3.2e-12 74.7 166 33.1
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.5e-12 73.9 42 83.3
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.6e-11 72.4 39 82.1
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.6e-11 71.2 60 60.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.0e-10 69.7 42 73.8
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.8e-10 68.9 52 59.6
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.3e-10 68.6 42 78.6
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.3e-10 68.6 42 76.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 3.9e-10 67.8 42 73.8
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.1e-10 67.4 39 76.9
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 6.7e-10 67.0 41 75.6
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 8.8e-10 66.6 35 85.7
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 1.1e-09 66.2 41 78.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 1.5e-09 65.9 42 73.8
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 6.3e-08 60.5 32 84.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.8e-07 58.9 35 80.0
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.3e-07 57.4 42 61.9
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 6.9e-07 57.0 31 83.9
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 9.1e-07 56.6 29 89.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.2e-06 56.2 61 45.9
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.4e-06 54.7 30 83.3
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 3.4e-06 54.7 30 86.7
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 3.4e-06 54.7 52 55.8


User provided reference genes

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