Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 6.0e-168 594.3 358 100.0
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 1.9e-33 147.5 389 37.5
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.3e-32 144.8 389 38.8
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.8e-32 142.9 362 38.1
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 6.2e-32 142.5 362 38.7
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 8.2e-32 142.1 362 37.8
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.1e-31 141.7 353 36.8
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-31 141.0 363 38.3
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 3.1e-31 140.2 347 36.3
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 6.9e-31 139.0 358 38.8
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.3e-29 134.8 383 36.6
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 8.4e-29 132.1 381 38.1
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.4e-28 131.3 363 36.1
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.4e-28 131.3 354 36.2
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 2.5e-28 130.6 370 36.2
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.2e-28 130.2 357 41.2
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 3.2e-28 130.2 360 35.8
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.2e-27 128.3 357 40.1
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.6e-27 127.9 373 39.1
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.3e-26 124.8 342 34.8
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 2.3e-26 124.0 366 38.3
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 2.3e-26 124.0 358 38.0
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 3.0e-26 123.6 374 36.4
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 8.7e-26 122.1 346 39.9
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 2.5e-25 120.6 367 39.0
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 5.7e-25 119.4 344 37.2
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 7.4e-25 119.0 397 33.8
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 1.3e-24 118.2 368 34.5
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.2e-24 117.5 350 34.0
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.8e-24 117.1 365 33.4
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 4.8e-24 116.3 344 36.6
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 4.8e-24 116.3 363 43.0
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 1.4e-23 114.8 354 35.0
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 3.1e-23 113.6 346 38.7
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 3.1e-23 113.6 340 33.8
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 4.1e-23 113.2 353 38.2
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 5.3e-23 112.8 345 36.2
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 6.9e-23 112.5 352 34.9
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 6.9e-23 112.5 342 35.4
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 3.4e-22 110.2 344 38.1
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 5.9e-22 109.4 309 35.6
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 5.9e-22 109.4 309 35.6
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 5.9e-22 109.4 299 35.5
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 7.7e-22 109.0 383 32.1
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 1.0e-21 108.6 347 34.9
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 1.3e-21 108.2 339 33.3
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 8.5e-21 105.5 336 33.3
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 8.5e-21 105.5 352 34.4
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 1.4e-20 104.8 343 31.2
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 1.4e-20 104.8 334 32.9
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 4.2e-20 103.2 357 36.7
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 4.2e-20 103.2 349 34.1
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 5.5e-20 102.8 371 33.7
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.2e-19 101.7 371 33.7
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 2.1e-19 100.9 370 33.0
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 2.1e-19 100.9 347 33.4
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 2.7e-19 100.5 345 35.4
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 3.6e-19 100.1 339 37.2
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 4.6e-19 99.8 353 36.3
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 5.1e-18 96.3 347 32.3
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 5.1e-18 96.3 348 32.5
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 6.7e-18 95.9 341 37.2
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 1.1e-17 95.1 325 33.8
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 2.0e-17 94.4 342 36.3
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 2.5e-17 94.0 223 39.0
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 5.7e-17 92.8 398 34.9
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 7.4e-17 92.4 351 33.3
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 7.4e-17 92.4 310 37.7
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.3e-16 91.7 341 34.9
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 2.8e-16 90.5 293 32.8
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 8.2e-16 89.0 362 35.6
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 1.4e-15 88.2 238 40.8
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-15 87.8 276 33.3
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.8e-15 87.8 269 32.0
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.4e-15 87.4 347 29.1
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 4.1e-15 86.7 350 35.1
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 4.1e-15 86.7 352 31.0
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 5.3e-15 86.3 340 34.1
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 5.3e-15 86.3 372 30.9
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 6.9e-15 85.9 270 32.2
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 9.1e-15 85.5 371 31.5
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 1.2e-14 85.1 217 36.4
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 1.2e-14 85.1 325 34.5
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 2.0e-14 84.3 311 41.5
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 2.6e-14 84.0 344 33.7
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 3.4e-14 83.6 283 33.9
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 3.8e-13 80.1 280 31.4
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 3.8e-13 80.1 351 29.6
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 5.0e-13 79.7 320 35.3
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 6.5e-13 79.3 244 40.6
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 6.5e-13 79.3 342 34.8
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 8.5e-13 79.0 349 34.1
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 1.4e-12 78.2 286 26.9
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 9.4e-12 75.5 278 33.8
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 1.2e-11 75.1 319 30.1
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 6.1e-11 72.8 338 34.0
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 6.1e-11 72.8 338 34.0
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 6.1e-11 72.8 338 34.0
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 6.1e-11 72.8 350 27.1
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 7.9e-11 72.4 351 30.8
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 7.9e-11 72.4 232 34.5
Aa31LG1G15900 Aethionema arabicum HOM05D005407 ORTHO05D006544 1.4e-10 71.6 273 35.9
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.4e-10 71.6 321 29.0
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 2.3e-10 70.9 212 32.5
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 3.0e-10 70.5 338 30.2
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 6.7e-10 69.3 375 32.8
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 1.1e-09 68.6 131 40.5
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 1.5e-09 68.2 226 32.7
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 2.6e-09 67.4 340 34.7
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 5.7e-09 66.2 226 31.9
Ah.02g125610 Amaranthus hybridus HOM05D005407 ORTHO05D006544 9.7e-09 65.5 115 43.5
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 9.7e-09 65.5 195 39.0
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 1.7e-08 64.7 214 35.5
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.7e-08 64.7 219 30.6
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 3.7e-08 63.5 342 30.7
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 4.8e-08 63.2 346 33.5
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 1.1e-07 62.0 228 33.3
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 2.4e-07 60.8 226 34.5
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 3.1e-07 60.5 234 28.6
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 4.1e-07 60.1 226 31.0
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 4.1e-07 60.1 226 31.0
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 4.1e-07 60.1 224 33.0
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 4.1e-07 60.1 222 34.2
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 5.3e-07 59.7 301 29.9
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 7.0e-07 59.3 342 32.2
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 9.1e-07 58.9 208 31.2
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 9.1e-07 58.9 208 31.2
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 2.6e-06 57.4 212 31.1


User provided reference genes

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