Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 0.0e+00 1135.6 572 100.0
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 4.4e-237 824.7 495 83.0
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 9.7e-237 823.5 577 74.4
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 1.4e-230 803.1 493 81.1
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.3e-230 802.4 580 73.1
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 2.3e-230 802.4 581 71.8
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.0e-230 802.0 572 70.8
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 5.2e-230 801.2 572 70.8
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 2.0e-229 799.3 573 73.5
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 4.4e-229 798.1 496 80.0
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.7e-228 796.2 568 74.1
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.2e-228 795.8 497 80.1
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 2.8e-228 795.4 530 76.0
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 2.8e-228 795.4 580 72.2
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 6.3e-228 794.3 573 72.6
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 6.3e-228 794.3 580 71.9
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 6.3e-228 794.3 580 71.9
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 8.2e-228 793.9 579 70.8
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.1e-227 793.5 573 72.3
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 3.1e-227 792.0 496 77.2
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 1.2e-226 790.0 494 80.0
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 1.6e-226 789.6 571 70.8
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 2.7e-226 788.9 576 72.0
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 3.5e-226 788.5 576 70.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 3.8e-225 785.0 490 79.8
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 3.8e-225 785.0 573 70.0
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 5.0e-225 784.6 572 72.2
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 5.0e-225 784.6 572 69.6
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 1.5e-224 783.1 573 70.3
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 1.9e-224 782.7 562 71.2
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.6e-223 779.6 561 72.5
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.6e-223 779.6 558 73.1
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.6e-223 779.6 491 78.8
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 1.0e-222 776.9 586 69.3
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 8.8e-222 773.9 492 79.1
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 2.6e-221 772.3 494 75.7
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 4.4e-221 771.5 579 70.1
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.3e-220 770.0 491 77.6
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 1.7e-220 769.6 493 76.9
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 4.8e-220 768.1 496 76.8
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 6.3e-220 767.7 497 76.7
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 8.3e-220 767.3 568 69.2
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 2.4e-219 765.8 552 70.8
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 2.4e-219 765.8 492 76.6
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 5.4e-219 764.6 511 75.3
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 9.1e-219 763.8 540 70.4
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 1.2e-218 763.5 493 76.9
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 2.7e-218 762.3 589 67.9
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.3e-217 760.0 472 78.4
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.3e-217 760.0 491 76.6
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 1.3e-217 760.0 572 68.2
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.7e-217 759.6 554 69.9
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 3.8e-217 758.4 576 69.6
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 6.6e-217 757.7 569 69.4
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 6.6e-217 757.7 578 68.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 8.6e-217 757.3 576 68.2
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 1.5e-216 756.5 481 76.1
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 1.5e-216 756.5 481 76.1
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.9e-216 756.1 481 77.1
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 9.5e-216 753.8 569 67.8
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.2e-215 753.4 588 66.0
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 1.2e-215 753.4 495 75.2
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 1.6e-215 753.1 578 68.2
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 2.8e-215 752.3 552 68.1
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 3.6e-215 751.9 471 77.3
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 6.1e-215 751.1 491 74.5
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 1.0e-214 750.4 492 74.4
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 1.4e-214 750.0 491 74.9
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 1.4e-214 750.0 491 75.2
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.8e-214 749.6 593 65.9
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 4.0e-214 748.4 491 73.3
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 5.2e-214 748.0 492 75.0
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 6.8e-214 747.7 492 74.8
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 1.5e-213 746.5 492 74.0
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 4.4e-213 745.0 492 74.0
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 5.7e-213 744.6 546 70.0
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.7e-212 743.0 566 67.8
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 4.9e-212 741.5 584 67.0
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 6.3e-212 741.1 474 76.6
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 8.3e-212 740.7 557 70.0
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.1e-211 740.3 474 76.6
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 7.0e-211 737.6 557 68.2
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 1.6e-210 736.5 490 74.5
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 6.6e-209 731.1 551 68.8
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 7.3e-208 727.6 527 72.9
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 9.5e-208 727.2 440 83.0
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 9.5e-208 727.2 477 74.8
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.4e-206 723.4 564 66.5
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.3e-204 716.8 563 66.4
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 1.2e-202 710.3 482 72.8
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 2.7e-202 709.1 573 64.9
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 1.3e-201 706.8 539 67.5
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.7e-201 706.4 492 72.2
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 3.0e-201 705.7 576 64.4
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.1e-198 697.2 444 76.6
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 6.4e-196 688.0 489 70.1
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.1e-195 687.2 491 71.5
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 1.1e-195 687.2 560 64.1
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 3.3e-192 675.6 495 69.3
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 4.9e-188 661.8 539 61.4
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.4e-187 660.2 486 67.5
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.4e-187 660.2 486 67.5
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 4.1e-187 658.7 411 78.3
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 2.7e-186 656.0 504 63.5
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 6.0e-186 654.8 486 66.9
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 3.3e-184 649.0 527 61.7
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.1e-182 644.0 464 68.1
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 1.0e-177 627.5 480 67.3
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.5e-176 623.6 575 60.3
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 7.3e-176 621.3 445 73.0
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 4.3e-168 595.5 496 61.9
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 2.8e-167 592.8 480 66.0
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.5e-165 587.0 480 59.6
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 1.2e-162 577.4 484 56.2
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 7.4e-160 568.2 478 57.9
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.9e-155 553.5 483 57.8
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 3.1e-150 536.2 441 65.1
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 7.4e-144 515.0 374 71.9
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.6e-143 513.8 552 48.9
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 8.8e-137 491.5 333 74.2
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 6.3e-135 485.3 307 80.5
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 5.7e-128 462.2 516 47.5
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 7.7e-125 451.8 502 47.4
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 2.7e-69 267.3 211 64.9
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 2.1e-61 241.1 490 31.4
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 3.2e-54 217.2 133 78.2
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 9.6e-43 179.1 115 73.9
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 5.8e-40 169.9 427 26.7
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 1.0e-28 132.5 72 83.3
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.9e-22 111.7 80 76.2
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 2.8e-18 97.8 432 24.3
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 9.1e-17 92.8 51 78.4
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 1.0e-15 89.4 417 26.6
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 1.9e-06 58.5 28 92.9


User provided reference genes

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