Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2434 Punica granatum HOM05D004651 ORTHO05D005761 7.1e-59 230.3 112 100.0
Eucgr.A02412 Eucalyptus grandis HOM05D000001 ORTHO05D000003 1.3e-47 193.0 110 83.6
THA.LOC104802364 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 5.0e-44 181.0 114 78.1
Glyma.02G174400 Glycine max HOM05D004651 ORTHO05D005761 8.5e-44 180.3 112 76.8
Glyma.10G093900 Glycine max HOM05D004651 ORTHO05D005761 5.5e-43 177.6 105 81.0
THA.LOC104819088 Tarenaya hassleriana HOM05D004651 ORTHO05D005761 1.0e-41 173.3 112 75.0
Cpa.g.sc85.122 Carica papaya HOM05D004651 ORTHO05D005761 3.0e-41 171.8 116 73.3
CANSAT80G2258 Cannabis sativa HOM05D004651 ORTHO05D005761 3.9e-41 171.4 88 89.8
arahy.Tifrunner.gnm1.ann1.F3K4LC Arachis hypogaea HOM05D005399 ORTHO05D006347 5.1e-41 171.0 113 73.5
Manes.09G030500 Manihot esculenta HOM05D004651 ORTHO05D005761 5.1e-41 171.0 120 73.3
ClCG04G000490 Citrullus lanatus HOM05D004651 ORTHO05D005761 8.7e-41 170.2 117 72.6
Phvul.007G256600 Phaseolus vulgaris HOM05D004651 ORTHO05D005761 1.1e-40 169.9 114 71.1
Sed0027459 Sechium edule HOM05D004651 ORTHO05D005761 1.1e-40 169.9 117 72.6
Carub.0004s2465 Capsella rubella HOM05D004651 ORTHO05D005761 1.9e-40 169.1 105 74.3
QL07p022191 Quercus lobata HOM05D004651 ORTHO05D005761 1.9e-40 169.1 115 72.2
Haze_19923 Corylus avellana HOM05D004651 ORTHO05D005761 2.5e-40 168.7 115 71.3
Cfa016877 Carpinus fangiana HOM05D004651 ORTHO05D005761 5.7e-40 167.5 115 70.4
COL.COLO4_28721 Corchorus olitorius HOM05D004651 ORTHO05D005761 9.7e-40 166.8 93 79.6
BcaC01g05307 Brassica carinata HOM05D004651 ORTHO05D005761 1.3e-39 166.4 105 73.3
Thhalv10017449m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 1.3e-39 166.4 105 73.3
AL5G39450 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 1.7e-39 166.0 105 73.3
AT3G57785 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 1.7e-39 166.0 105 73.3
Sabra16G0055100 Salix brachista HOM05D004651 ORTHO05D005761 1.7e-39 166.0 110 70.9
Sp4g24480 Schrenkiella parvula HOM05D004651 ORTHO05D005761 1.7e-39 166.0 105 73.3
Sc19g0006860 Simmondsia chinensis HOM05D004651 ORTHO05D005761 1.7e-39 166.0 117 68.4
MD07G1000900 Malus domestica HOM05D004651 ORTHO05D005761 2.8e-39 165.2 81 90.1
MD14G1064400 Malus domestica HOM05D004651 ORTHO05D005761 2.8e-39 165.2 81 90.1
Cc06_g16440 Coffea canephora HOM05D004651 ORTHO05D005761 3.7e-39 164.9 115 68.7
Gohir.D11G330800 Gossypium hirsutum HOM05D004651 ORTHO05D005761 3.7e-39 164.9 96 80.2
Gorai.007G361500 Gossypium raimondii HOM05D004651 ORTHO05D005761 3.7e-39 164.9 96 80.2
Aa31LG1G23980 Aethionema arabicum HOM05D004651 ORTHO05D005761 4.8e-39 164.5 105 74.3
CiPaw.09G033900 Carya illinoinensis HOM05D004651 ORTHO05D005761 4.8e-39 164.5 114 69.3
Gohir.D11G330900 Gossypium hirsutum HOM05D004651 ORTHO05D005761 4.8e-39 164.5 90 82.2
MD12G1064300 Malus domestica HOM05D004651 ORTHO05D005761 4.8e-39 164.5 90 85.6
Aa31LG10G12520 Aethionema arabicum HOM05D004651 ORTHO05D005761 6.3e-39 164.1 105 72.4
C04p03440 Brassica napus HOM05D004651 ORTHO05D005761 6.3e-39 164.1 110 71.8
BolC4t21980H Brassica oleracea HOM05D004651 ORTHO05D005761 6.3e-39 164.1 110 71.8
Gorai.007G361600 Gossypium raimondii HOM05D004651 ORTHO05D005761 6.3e-39 164.1 84 86.9
GSVIVG01033348001 Vitis vinifera HOM05D000001 ORTHO05D000003 6.3e-39 164.1 107 72.9
Sabra06G0040200 Salix brachista HOM05D004651 ORTHO05D005761 8.2e-39 163.7 110 71.8
Thecc.05G165000 Theobroma cacao HOM05D004651 ORTHO05D005761 8.2e-39 163.7 84 85.7
BcaC02g07250 Brassica carinata HOM05D004651 ORTHO05D005761 1.1e-38 163.3 111 70.3
C04p69620 Brassica napus HOM05D004651 ORTHO05D005761 1.1e-38 163.3 111 70.3
BolC4t28461H Brassica oleracea HOM05D004651 ORTHO05D005761 1.1e-38 163.3 111 70.3
BraA04t18667Z Brassica rapa HOM05D004651 ORTHO05D005761 1.1e-38 163.3 111 70.3
Ciclev10006760m.g Citrus clementina HOM05D000001 ORTHO05D000003 1.1e-38 163.3 97 75.3
MELO3C026725.2 Cucumis melo HOM05D004651 ORTHO05D005761 1.1e-38 163.3 88 85.2
Hma1.2p1_0856F.1_g229150 Hydrangea macrophylla HOM05D004651 ORTHO05D005761 1.1e-38 163.3 113 69.9
Nn2g15489 Nelumbo nucifera HOM05D004651 ORTHO05D005761 1.1e-38 163.3 119 70.6
AL4G40670 Arabidopsis lyrata HOM05D004651 ORTHO05D005761 1.4e-38 162.9 116 68.1
AT2G42310 Arabidopsis thaliana HOM05D004651 ORTHO05D005761 1.4e-38 162.9 116 68.1
Carub.0005s2464 Capsella rubella HOM05D004651 ORTHO05D005761 1.4e-38 162.9 105 72.4
Potri.016G051400 Populus trichocarpa HOM05D004651 ORTHO05D005761 1.4e-38 162.9 110 69.1
Zm00001eb034850 Zea mays HOM05D004651 ORTHO05D005761 1.4e-38 162.9 105 72.4
BcaC02g12474 Brassica carinata HOM05D004651 ORTHO05D005761 1.8e-38 162.5 110 71.8
Gohir.A11G313600 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.8e-38 162.5 96 79.2
A03p23620 Brassica napus HOM05D004651 ORTHO05D005761 2.4e-38 162.2 96 77.1
BraA03t11578Z Brassica rapa HOM05D004651 ORTHO05D005761 2.4e-38 162.2 96 77.1
CARHR137350 Cardamine hirsuta HOM05D004651 ORTHO05D005761 2.4e-38 162.2 116 68.1
CsaV3_4G011920 Cucumis sativus L. HOM05D004651 ORTHO05D005761 2.4e-38 162.2 103 77.7
Thhalv10006322m.g Eutrema salsugineum HOM05D004651 ORTHO05D005761 2.4e-38 162.2 105 70.5
Oeu033769.1 Olea europaea HOM05D004651 ORTHO05D005761 2.4e-38 162.2 107 72.9
Rhsim03G0011100 Rhododendron simsii HOM05D004651 ORTHO05D005761 2.4e-38 162.2 114 68.4
RcHm_v2.0_Chr3g0480781 Rosa chinensis HOM05D004651 ORTHO05D005761 2.4e-38 162.2 92 85.9
BraA05t19275Z Brassica rapa HOM05D004651 ORTHO05D005761 3.1e-38 161.8 97 75.3
CSS0019774 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 3.1e-38 161.8 108 71.3
CSS0028305 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 3.1e-38 161.8 108 71.3
SGA_v2.0_scaffold105G30461 Striga asiatica HOM05D004651 ORTHO05D005761 3.1e-38 161.8 107 72.0
Prupe.7G069800 Prunus persica HOM05D004651 ORTHO05D005761 4.1e-38 161.4 90 84.4
BcaNung04397 Brassica carinata HOM05D004651 ORTHO05D005761 5.3e-38 161.0 108 71.3
Lj5g0006028 Lotus japonicus HOM05D004651 ORTHO05D005761 5.3e-38 161.0 112 68.8
A05p02830 Brassica napus HOM05D004651 ORTHO05D005761 6.9e-38 160.6 97 74.2
SHI26332 Sapria himalayana HOM05D004651 ORTHO05D005761 6.9e-38 160.6 90 80.0
Atru.chr1.949 Acer truncatum HOM05D004651 ORTHO05D005761 9.1e-38 160.2 97 74.2
A04p32130 Brassica napus HOM05D004651 ORTHO05D005761 9.1e-38 160.2 111 69.4
HanXRQChr10g0294281 Helianthus annuus HOM05D004651 ORTHO05D005761 9.1e-38 160.2 117 66.7
CiPaw.10G029700 Carya illinoinensis HOM05D004651 ORTHO05D005761 1.2e-37 159.8 120 65.8
Zm00001eb316630 Zea mays HOM05D004651 ORTHO05D005761 1.2e-37 159.8 89 79.8
DCAR_013570 Daucus carota HOM05D004651 ORTHO05D005761 1.5e-37 159.5 112 68.8
FvH4_6g22990 Fragaria vesca HOM05D004651 ORTHO05D005761 1.5e-37 159.5 92 84.8
FAN02G2491 Fragaria x ananassa HOM05D004651 ORTHO05D005761 1.5e-37 159.5 81 87.7
FAN05G1131 Fragaria x ananassa HOM05D004651 ORTHO05D005761 1.5e-37 159.5 92 84.8
FAN09G0537 Fragaria x ananassa HOM05D004651 ORTHO05D005761 1.5e-37 159.5 92 84.8
Gohir.A11G313700 Gossypium hirsutum HOM05D004651 ORTHO05D005761 1.5e-37 159.5 96 78.1
Manes.08G047600 Manihot esculenta HOM05D004651 ORTHO05D005761 1.5e-37 159.5 113 73.5
BcaB06g29236 Brassica carinata HOM05D004651 ORTHO05D005761 2.0e-37 159.1 105 71.4
BcaC02g07246 Brassica carinata HOM05D004651 ORTHO05D005761 2.0e-37 159.1 105 71.4
Lsat_1_v5_gn_9_27580 Lactuca sativa HOM05D004651 ORTHO05D005761 2.6e-37 158.7 117 65.0
Dinv18101 Davidia involucrata HOM05D000001 ORTHO05D000003 4.5e-37 157.9 114 68.4
Nitab4.5_0000603g0080 Nicotiana tabacum HOM05D004651 ORTHO05D005761 4.5e-37 157.9 105 70.5
Potri.006G056900 Populus trichocarpa HOM05D004651 ORTHO05D005761 4.5e-37 157.9 108 71.3
MSTRG.6460 Avicennia marina HOM05D004651 ORTHO05D005761 5.9e-37 157.5 105 69.5
Lalb_Chr21g0319241 Lupinus albus HOM05D004651 ORTHO05D005761 7.7e-37 157.1 113 70.8
CDE05G0104 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 1.0e-36 156.8 118 65.3
Dinv24113 Davidia involucrata HOM05D004651 ORTHO05D005761 1.0e-36 156.8 113 69.0
HPP92_022788 Vanilla planifolia HOM05D004651 ORTHO05D005761 1.3e-36 156.4 93 74.2
Aqoxy2G00117 Aquilegia oxysepala HOM05D004651 ORTHO05D005761 1.7e-36 156.0 115 64.3
TWI34G0893 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 2.2e-36 155.6 111 66.7
TWI34G1227 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 2.2e-36 155.6 111 66.7
Duzib093G1593 Durio zibethinus HOM05D004651 ORTHO05D005761 2.9e-36 155.2 91 76.9
Duzib128G1036 Durio zibethinus HOM05D004651 ORTHO05D005761 2.9e-36 155.2 84 81.0
Sed0009176 Sechium edule HOM05D004651 ORTHO05D005761 3.8e-36 154.8 88 80.7
Ah.04g152020 Amaranthus hybridus HOM05D004651 ORTHO05D005761 5.0e-36 154.5 102 70.6
AUR62024379 Chenopodium quinoa HOM05D004651 ORTHO05D005761 6.5e-36 154.1 106 67.9
AUR62025977 Chenopodium quinoa HOM05D004651 ORTHO05D005761 6.5e-36 154.1 106 67.9
Nitab4.5_0003477g0030 Nicotiana tabacum HOM05D004651 ORTHO05D005761 6.5e-36 154.1 100 72.0
EL10Ac3g06986 Beta vulgaris HOM05D004651 ORTHO05D005761 1.4e-35 152.9 111 66.7
Migut.J01795 Erythranthe guttata HOM05D004651 ORTHO05D005761 1.4e-35 152.9 107 69.2
Peaxi162Scf00285g00014 Petunia axillaris HOM05D004651 ORTHO05D005761 1.4e-35 152.9 105 71.4
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 1.4e-35 152.9 105 69.5
Os09g0487500 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 1.9e-35 152.5 86 77.9
Ca_04847_v3 Cicer arietinum L. HOM05D004651 ORTHO05D005761 2.5e-35 152.1 105 70.5
Lalb_Chr02g0159821 Lupinus albus HOM05D004651 ORTHO05D005761 2.5e-35 152.1 97 74.2
Ah.13g076160 Amaranthus hybridus HOM05D004651 ORTHO05D005761 3.2e-35 151.8 102 67.6
Psat6g130960 Pisum sativum HOM05D004651 ORTHO05D005761 3.2e-35 151.8 101 71.3
Sp5g04900 Schrenkiella parvula HOM05D004651 ORTHO05D005761 4.2e-35 151.4 105 66.7
Solyc02g085540.1 Solanum lycopersicum HOM05D004651 ORTHO05D005761 4.2e-35 151.4 105 68.6
PGSC0003DMG400012662 Solanum tuberosum HOM05D004651 ORTHO05D005761 4.2e-35 151.4 105 68.6
HanXRQChr13g0391011 Helianthus annuus HOM05D004651 ORTHO05D005761 5.5e-35 151.0 104 69.2
Actinidia38568 Actinidia chinensis HOM05D004651 ORTHO05D005761 7.2e-35 150.6 114 63.2
ECA236G1810 Erigeron canadensis HOM05D004651 ORTHO05D005761 7.2e-35 150.6 97 71.1
TPR.G25632 Trifolium pratense HOM05D004651 ORTHO05D005761 7.2e-35 150.6 86 79.1
Peaxi162Scf00406g00069 Petunia axillaris HOM05D004651 ORTHO05D005761 9.4e-35 150.2 105 66.7
CDE05G0718 Ceratophyllum demersum HOM05D004651 ORTHO05D005761 1.6e-34 149.4 118 62.7
Medtr1g059290 Medicago truncatula HOM05D004651 ORTHO05D005761 1.6e-34 149.4 80 83.8
TWI60G1376 Tripterygium wilfordii HOM05D004651 ORTHO05D005761 1.6e-34 149.4 111 65.8
TAR623G0603 Trochodendron aralioides HOM05D004651 ORTHO05D005761 1.6e-34 149.4 118 64.4
CAN.G358.117 Capsicum annuum HOM05D004651 ORTHO05D005761 2.1e-34 149.1 77 83.1
Migut.K00065 Erythranthe guttata HOM05D004651 ORTHO05D005761 2.1e-34 149.1 107 65.4
SGA_v2.0_scaffold94G28447 Striga asiatica HOM05D004651 ORTHO05D005761 3.6e-34 148.3 114 62.3
Lsat_1_v5_gn_5_163881 Lactuca sativa HOM05D006723 ORTHO05D008194 7.9e-34 147.1 116 63.8
Nitab4.5_0004063g0110 Nicotiana tabacum HOM05D004651 ORTHO05D005761 7.9e-34 147.1 117 62.4
Nitab4.5_0001347g0050 Nicotiana tabacum HOM05D004651 ORTHO05D005761 1.0e-33 146.7 117 62.4
MBI01_g38800_MAGBIO Magnolia biondii HOM05D004651 ORTHO05D005761 1.5e-32 142.9 75 81.3
PSO384G0298 Papaver somniferum HOM05D004651 ORTHO05D005761 2.0e-32 142.5 118 61.0
PSO339G4089 Papaver somniferum HOM05D004651 ORTHO05D005761 4.4e-32 141.4 118 60.2
Os08g0505001 Oryza sativa ssp. japonica HOM05D004651 ORTHO05D005761 9.7e-32 140.2 75 81.3
ATR0605G299 Amborella trichopoda HOM05D004651 ORTHO05D005761 6.9e-30 134.0 84 71.4
Prupe.5G050600 Prunus persica HOM05D004651 ORTHO05D005761 7.7e-29 130.6 67 86.6
ATR0605G353 Amborella trichopoda HOM05D004651 ORTHO05D005761 2.2e-28 129.0 84 69.0
CSS0043471 Camellia sinensis var. sinensis HOM05D004651 ORTHO05D005761 1.0e-25 120.2 103 58.3
SEGI_06557 Sequoiadendron giganteum HOM05D004651 ORTHO05D005761 5.2e-25 117.9 79 68.4
C03p28150 Brassica napus HOM05D004651 ORTHO05D005761 9.7e-24 113.6 54 90.7
RcHm_v2.0_Chr5g0057691 Rosa chinensis HOM05D004651 ORTHO05D005761 2.6e-21 105.5 64 78.1
Mapoly0006s0067 Marchantia polymorpha HOM05D004651 ORTHO05D005761 2.2e-20 102.4 96 54.2
AagrBONN_evm.TU.Sc2ySwM_362.1672 Anthoceros agrestis HOM05D004651 ORTHO05D005761 3.8e-20 101.7 98 54.1
Pp3c3_16790 Physcomitrium patens HOM05D004651 ORTHO05D005761 5.5e-19 97.8 79 57.0
Rhsim10G0114900 Rhododendron simsii HOM05D004651 ORTHO05D005761 2.1e-18 95.9 61 77.0
Oeu038276.1 Olea europaea HOM05D004651 ORTHO05D005761 6.7e-17 90.9 53 77.4
CBR_g8350 Chara braunii HOM05D004651 ORTHO05D005761 2.0e-16 89.4 92 47.8
SMO203G0043 Selaginella moellendorffii HOM05D004651 ORTHO05D005761 6.3e-15 84.3 73 52.1
BcaB06g26137 Brassica carinata HOM05D004651 ORTHO05D005761 1.7e-12 76.3 59 64.4
MBI11_g15908_MAGBIO Magnolia biondii HOM05D004651 ORTHO05D005761 1.5e-11 73.2 71 49.3
MCO03G385 Micromonas commoda HOM05D004651 ORTHO05D005761 5.5e-11 71.2 69 49.3
SGA_v2.0_scaffold18G08230 Striga asiatica HOM05D004651 ORTHO05D401477 2.6e-08 62.4 66 53.0
Aa31LG3G1100 Aethionema arabicum HOM05D004651 ORTHO05D005761 1.7e-07 59.7 101 40.6
unitig_8.g3516 Utricularia gibba HOM05D004651 ORTHO05D005761 8.3e-07 57.4 48 56.2


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