Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2296 Punica granatum HOM05D007532 ORTHO05D009483 5.6e-136 487.6 254 100.0
Cpa.g.sc104.49 Carica papaya HOM05D007532 ORTHO05D009483 1.3e-36 157.5 249 42.6
Haze_19695 Corylus avellana HOM05D007532 ORTHO05D009483 4.4e-32 142.5 211 45.5
Cfa016678 Carpinus fangiana HOM05D007532 ORTHO05D009483 7.6e-32 141.7 211 44.1
COL.COLO4_29593 Corchorus olitorius HOM05D007532 ORTHO05D009483 3.8e-31 139.4 261 39.1
TAR623G0884 Trochodendron aralioides HOM05D007532 ORTHO05D009483 8.4e-31 138.3 246 39.8
Thecc.05G102000 Theobroma cacao HOM05D007532 ORTHO05D009483 1.1e-30 137.9 230 43.0
Duzib093G1477 Durio zibethinus HOM05D007532 ORTHO05D009483 2.3e-28 130.2 256 39.5
GSVIVG01033946001 Vitis vinifera HOM05D007532 ORTHO05D009483 3.0e-28 129.8 259 41.3
Manes.09G046800 Manihot esculenta HOM05D007532 ORTHO05D009483 2.5e-27 126.7 217 39.2
Oeu055526.1 Olea europaea HOM05D007532 ORTHO05D009483 2.5e-27 126.7 221 40.7
Potri.016G071700 Populus trichocarpa HOM05D007532 ORTHO05D009483 3.3e-27 126.3 258 39.5
Atru.chr8.1383 Acer truncatum HOM05D007532 ORTHO05D009483 5.6e-27 125.6 225 42.2
Actinidia32050 Actinidia chinensis HOM05D007532 ORTHO05D009483 1.1e-25 121.3 221 40.7
CiPaw.10G016200 Carya illinoinensis HOM05D007532 ORTHO05D009483 1.8e-25 120.6 209 40.2
Dinv31750 Davidia involucrata HOM05D010118 ORTHO05D009483 1.2e-24 117.9 207 43.0
Nn6g34736 Nelumbo nucifera HOM05D007532 ORTHO05D009483 3.4e-24 116.3 228 39.5
TWI74G0748 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 2.2e-23 113.6 208 40.9
Oeu045039.1 Olea europaea HOM05D007532 ORTHO05D009483 2.9e-23 113.2 215 38.6
Gohir.A09G135100 Gossypium hirsutum HOM05D007532 ORTHO05D009483 1.4e-22 110.9 221 41.6
Ciclev10012763m.g Citrus clementina HOM05D007532 ORTHO05D009483 2.4e-22 110.2 221 37.1
Nitab4.5_0000020g0210 Nicotiana tabacum HOM05D007532 ORTHO05D009483 2.4e-22 110.2 238 36.6
Nitab4.5_0006654g0010 Nicotiana tabacum HOM05D007532 ORTHO05D009483 7.1e-22 108.6 238 35.7
RcHm_v2.0_Chr3g0475571 Rosa chinensis HOM05D007532 ORTHO05D009483 1.2e-21 107.8 222 34.7
Gohir.D09G131700 Gossypium hirsutum HOM05D007532 ORTHO05D009483 2.1e-21 107.1 221 39.4
Migut.L01834 Erythranthe guttata HOM05D007532 ORTHO05D009483 2.7e-21 106.7 226 38.1
Gorai.006G150300 Gossypium raimondii HOM05D007532 ORTHO05D009483 2.7e-21 106.7 221 39.4
QL07p037073 Quercus lobata HOM05D007532 ORTHO05D009483 2.7e-21 106.7 220 38.2
Duzib128G1100 Durio zibethinus HOM05D007532 ORTHO05D009483 1.3e-20 104.4 255 36.1
Potri.006G204400 Populus trichocarpa HOM05D007532 ORTHO05D009483 6.6e-20 102.1 220 38.6
Duzib106G1076 Durio zibethinus HOM05D007532 ORTHO05D009483 1.1e-19 101.3 222 37.8
Manes.08G032400 Manihot esculenta HOM05D007532 ORTHO05D009483 1.1e-19 101.3 213 36.6
Actinidia04004 Actinidia chinensis HOM05D007532 ORTHO05D009483 1.5e-19 100.9 193 38.9
TWI77G0050 Tripterygium wilfordii HOM05D007532 ORTHO05D009483 4.3e-19 99.4 215 35.8
SalBow5G5402 Salvia bowleyana HOM05D007532 ORTHO05D009483 9.6e-19 98.2 220 36.4
CANSAT64G0088 Cannabis sativa HOM05D007532 ORTHO05D009483 1.3e-18 97.8 219 35.6
Lsat_1_v5_gn_2_55700 Lactuca sativa HOM05D007532 ORTHO05D009483 1.6e-18 97.4 219 38.4
FvH4_6g20110 Fragaria vesca HOM05D007532 ORTHO05D009483 2.1e-18 97.1 225 32.9
FAN14G5580 Fragaria x ananassa HOM05D007532 ORTHO05D009483 2.1e-18 97.1 225 32.9
Sabra06G0157400 Salix brachista HOM05D007532 ORTHO05D009483 2.1e-18 97.1 219 37.9
MSTRG.10404 Avicennia marina HOM05D007532 ORTHO05D009483 8.1e-18 95.1 225 38.2
FAN05G0427 Fragaria x ananassa HOM05D007532 ORTHO05D009483 1.8e-17 94.0 222 32.0
Lsat_1_v5_gn_1_57140 Lactuca sativa HOM05D007532 ORTHO05D009483 1.8e-17 94.0 213 35.7
Sabra16G0072100 Salix brachista HOM05D007532 ORTHO05D009483 3.1e-17 93.2 254 33.1
BcaB01g00362 Brassica carinata HOM05D007532 ORTHO05D009483 6.9e-17 92.0 220 36.4
Oeu035652.1 Olea europaea HOM05D007532 ORTHO05D009483 6.9e-17 92.0 219 36.5
Eucgr.A02598 Eucalyptus grandis HOM05D007532 ORTHO05D009483 9.0e-17 91.7 231 35.9
DCAR_020715 Daucus carota HOM05D007532 ORTHO05D009483 1.5e-16 90.9 231 33.3
AL5G33190 Arabidopsis lyrata HOM05D007532 ORTHO05D009483 3.4e-16 89.7 219 38.4
Sabra16G0073900 Salix brachista HOM05D007532 ORTHO05D009483 3.4e-16 89.7 259 32.0
C08p27760 Brassica napus HOM05D007532 ORTHO05D009483 7.6e-16 88.6 216 38.0
PSO339G0695 Papaver somniferum HOM05D007532 ORTHO05D009483 1.3e-15 87.8 232 34.9
MBI17_g22147_MAGBIO Magnolia biondii HOM05D007532 ORTHO05D009483 1.7e-15 87.4 235 32.8
Carub.0005s1887 Capsella rubella HOM05D007532 ORTHO05D009483 4.9e-15 85.9 216 36.6
BcaC07g39613 Brassica carinata HOM05D007532 ORTHO05D009483 6.4e-15 85.5 216 37.5
BolC8t50392H Brassica oleracea HOM05D007532 ORTHO05D009483 6.4e-15 85.5 216 37.5
PSO384G2238 Papaver somniferum HOM05D007532 ORTHO05D009483 1.1e-14 84.7 239 32.2
AT3G52480 Arabidopsis thaliana HOM05D007532 ORTHO05D009483 1.9e-14 84.0 218 36.7
A09p45610 Brassica napus HOM05D007532 ORTHO05D009483 2.4e-14 83.6 216 36.6
BraA09t40022Z Brassica rapa HOM05D007532 ORTHO05D009483 2.4e-14 83.6 216 36.6
CARHR162250 Cardamine hirsuta HOM05D007532 ORTHO05D009483 7.1e-14 82.0 226 33.2
Gohir.D04G094900 Gossypium hirsutum HOM05D007532 ORTHO05D009483 9.3e-14 81.6 245 33.9
Gorai.009G397600 Gossypium raimondii HOM05D007532 ORTHO05D009483 1.2e-13 81.3 245 33.9
SGA_v2.0_scaffold35G14004 Striga asiatica HOM05D007532 ORTHO05D009483 1.2e-13 81.3 178 35.4
Thhalv10010711m.g Eutrema salsugineum HOM05D007532 ORTHO05D009483 3.5e-13 79.7 220 34.1
Rhsim03G0066200 Rhododendron simsii HOM05D007532 ORTHO05D009483 3.5e-13 79.7 204 33.3
Lj1C1049T4 Lonicera japonica HOM05D007532 ORTHO05D009483 4.6e-13 79.3 152 38.8
ClCG10G018450 Citrullus lanatus HOM05D007532 ORTHO05D009483 7.9e-13 78.6 227 29.5
Phvul.007G269000 Phaseolus vulgaris HOM05D007532 ORTHO05D009483 1.8e-12 77.4 229 31.9
MD14G1037100 Malus domestica HOM05D007532 ORTHO05D009483 5.1e-12 75.9 219 33.8
Gohir.A04G060800 Gossypium hirsutum HOM05D007532 ORTHO05D009483 8.7e-12 75.1 245 33.5
Aqoxy1G00693 Aquilegia oxysepala HOM05D007532 ORTHO05D009483 3.6e-10 69.7 203 32.5
MELO3C009524.2 Cucumis melo HOM05D007532 ORTHO05D009483 6.2e-10 68.9 226 28.8
Sc20g0006700 Simmondsia chinensis HOM05D007532 ORTHO05D009483 1.1e-09 68.2 129 35.7
CSS0006598 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 5.3e-09 65.9 236 27.5
CSS0034701 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 5.3e-09 65.9 236 27.5
AUR62037048 Chenopodium quinoa HOM05D007532 ORTHO05D009483 6.9e-09 65.5 216 31.9
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 6.9e-09 65.5 229 28.4
Prupe.7G097300 Prunus persica HOM05D007532 ORTHO05D009483 6.9e-09 65.5 220 29.5
DCAR_027636 Daucus carota HOM05D002150 ORTHO05D002191 1.2e-08 64.7 229 29.3
Prupe.2G233200 Prunus persica HOM05D002150 ORTHO05D002191 1.5e-08 64.3 239 25.9
TWI15G1205 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 1.5e-08 64.3 224 25.9
Sp5g09820 Schrenkiella parvula HOM05D007532 ORTHO05D009483 3.4e-08 63.2 216 30.1
AUR62006278 Chenopodium quinoa HOM05D007532 ORTHO05D009483 5.8e-08 62.4 215 31.2
Lsat_1_v5_gn_2_119741 Lactuca sativa HOM05D002150 ORTHO05D002191 5.8e-08 62.4 225 28.0
ATR0772G158 Amborella trichopoda HOM05D002150 ORTHO05D002191 7.6e-08 62.0 169 31.4
MELO3C021655.2 Cucumis melo HOM05D002150 ORTHO05D002191 7.6e-08 62.0 265 28.3
CsaV3_5G026480 Cucumis sativus L. HOM05D002150 ORTHO05D002191 7.6e-08 62.0 265 28.3
Aa31LG10G7530 Aethionema arabicum HOM05D007532 ORTHO05D009483 9.9e-08 61.6 220 28.2
ClCG09G019970 Citrullus lanatus HOM05D002150 ORTHO05D002191 9.9e-08 61.6 265 28.3
Lj5g0000288 Lotus japonicus HOM05D007532 ORTHO05D009483 9.9e-08 61.6 218 28.9
BolC1t05302H Brassica oleracea HOM05D014261 ORTHO05D016579 1.3e-07 61.2 164 35.4
DCAR_016921 Daucus carota HOM05D007532 ORTHO05D009483 1.3e-07 61.2 213 31.5
ECA238G0408 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-07 60.8 196 32.1
Actinidia02955 Actinidia chinensis HOM05D002150 ORTHO05D002191 2.2e-07 60.5 255 26.7
FAN10G3914 Fragaria x ananassa HOM05D002150 ORTHO05D002191 2.2e-07 60.5 244 26.2
Lsat_1_v5_gn_8_15640 Lactuca sativa HOM05D002150 ORTHO05D002191 2.2e-07 60.5 226 27.4
TAR623G1329 Trochodendron aralioides HOM05D002150 ORTHO05D002191 2.9e-07 60.1 257 25.7
THA.LOC104826804 Tarenaya hassleriana HOM05D014261 ORTHO05D016579 4.9e-07 59.3 134 39.6
TAR369G0649 Trochodendron aralioides HOM05D002150 ORTHO05D002191 4.9e-07 59.3 230 24.3
ECA238G3924 Erigeron canadensis HOM05D002150 ORTHO05D002191 8.4e-07 58.5 174 28.2
Manes.07G114700 Manihot esculenta HOM05D002150 ORTHO05D002191 8.4e-07 58.5 230 28.7
TWI38G0694 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 8.4e-07 58.5 263 26.2
Hma1.2p1_1263F.1_g271270 Hydrangea macrophylla HOM05D002150 ORTHO05D002191 1.1e-06 58.2 262 25.2
Nn5g26936 Nelumbo nucifera HOM05D002150 ORTHO05D002191 1.1e-06 58.2 263 25.1
CiPaw.02G183100 Carya illinoinensis HOM05D002150 ORTHO05D002191 1.4e-06 57.8 239 23.8
QL08p059179 Quercus lobata HOM05D002150 ORTHO05D002191 1.4e-06 57.8 238 24.8
EL10Ac2g03394 Beta vulgaris HOM05D002150 ORTHO05D002191 1.9e-06 57.4 183 27.3
CSS0001235 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 1.9e-06 57.4 255 28.2
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 1.9e-06 57.4 243 24.7
HanXRQChr08g0220401 Helianthus annuus HOM05D002150 ORTHO05D002191 2.4e-06 57.0 257 26.1
Potri.008G054400 Populus trichocarpa HOM05D002150 ORTHO05D002191 2.4e-06 57.0 256 25.0
Aqoxy4G02951 Aquilegia oxysepala HOM05D002150 ORTHO05D002191 3.2e-06 56.6 268 27.2
CDE08G0971 Ceratophyllum demersum HOM05D002150 ORTHO05D002191 3.2e-06 56.6 149 28.2
BNapus_Darmor_BZH_scaffold_145p00030 Brassica napus HOM05D014261 ORTHO05D016579 4.2e-06 56.2 160 33.8
Prupe.6G080000 Prunus persica HOM05D002150 ORTHO05D002191 4.2e-06 56.2 172 26.7
Sed0020416 Sechium edule HOM05D002150 ORTHO05D002191 4.2e-06 56.2 264 27.3
TPR.G31864 Trifolium pratense HOM05D007532 ORTHO05D009483 4.2e-06 56.2 212 25.5
Potri.010G206100 Populus trichocarpa HOM05D002150 ORTHO05D002191 5.5e-06 55.8 256 25.4
Sp3g09870 Schrenkiella parvula HOM05D014261 ORTHO05D016579 5.5e-06 55.8 160 31.9
Ca_11714_v3 Cicer arietinum L. HOM05D007532 ORTHO05D009483 7.1e-06 55.5 214 29.0
Duzib128G1760 Durio zibethinus HOM05D002150 ORTHO05D002191 7.1e-06 55.5 228 25.9
FAN06G2166 Fragaria x ananassa HOM05D002150 ORTHO05D002191 9.3e-06 55.1 158 27.8
Lalb_Chr10g0091741 Lupinus albus HOM05D002150 ORTHO05D002191 9.3e-06 55.1 215 26.5


User provided reference genes

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