Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 4.9e-73 277.7 140 100.0
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 2.5e-29 132.5 135 54.8
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 4.8e-28 128.3 132 56.1
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.1e-27 127.1 117 59.8
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.0e-27 125.2 117 58.1
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 1.2e-26 123.6 119 59.7
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 2.6e-26 122.5 109 61.5
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 4.5e-26 121.7 109 61.5
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 5.8e-26 121.3 131 57.3
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 7.6e-26 120.9 124 50.8
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 7.6e-26 120.9 126 52.4
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 1.7e-25 119.8 123 52.0
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 1.7e-25 119.8 127 52.0
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 2.2e-25 119.4 119 58.0
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 2.2e-25 119.4 107 64.5
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 2.2e-25 119.4 123 55.3
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 3.8e-25 118.6 137 48.2
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 1.1e-24 117.1 118 55.9
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.1e-24 117.1 118 55.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.4e-24 116.7 104 61.5
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 1.9e-24 116.3 125 56.0
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 2.4e-24 115.9 104 61.5
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 2.4e-24 115.9 90 63.3
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 3.2e-24 115.5 118 55.9
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 3.2e-24 115.5 104 60.6
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 4.2e-24 115.2 69 78.3
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.2e-24 115.2 118 55.9
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 5.5e-24 114.8 112 58.0
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.5e-24 114.8 119 56.3
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 5.5e-24 114.8 121 52.9
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 7.1e-24 114.4 104 61.5
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 1.2e-23 113.6 133 49.6
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 1.6e-23 113.2 121 52.9
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 1.6e-23 113.2 121 52.9
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 1.6e-23 113.2 124 55.6
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.6e-23 113.2 75 73.3
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 2.1e-23 112.8 128 52.3
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 2.1e-23 112.8 106 56.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 2.7e-23 112.5 107 59.8
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 3.5e-23 112.1 94 60.6
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 3.5e-23 112.1 136 51.5
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 4.6e-23 111.7 105 61.0
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 6.0e-23 111.3 106 56.6
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 7.9e-23 110.9 64 78.1
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 7.9e-23 110.9 125 48.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 3.0e-22 109.0 65 76.9
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 3.0e-22 109.0 131 47.3
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 3.9e-22 108.6 64 78.1
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 3.9e-22 108.6 112 55.4
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 3.9e-22 108.6 84 66.7
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 5.1e-22 108.2 107 58.9
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 5.1e-22 108.2 125 49.6
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 6.7e-22 107.8 62 82.3
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 6.7e-22 107.8 123 54.5
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.1e-21 107.1 73 71.2
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.1e-21 107.1 88 61.4
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 1.1e-21 107.1 91 60.4
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 1.1e-21 107.1 120 48.3
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.5e-21 105.9 115 50.4
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.3e-21 105.5 83 65.1
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 7.4e-21 104.4 114 48.2
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 1.3e-20 103.6 108 56.5
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 1.3e-20 103.6 69 69.6
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 1.6e-20 103.2 83 61.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 1.6e-20 103.2 83 61.4
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.6e-20 103.2 115 51.3
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 1.6e-20 103.2 74 71.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 2.1e-20 102.8 83 61.4
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 2.1e-20 102.8 83 61.4
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 2.8e-20 102.4 115 51.3
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 4.8e-20 101.7 83 59.0
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 4.8e-20 101.7 71 67.6
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 4.8e-20 101.7 120 49.2
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 4.8e-20 101.7 107 54.2
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 4.8e-20 101.7 64 75.0
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 6.2e-20 101.3 67 71.6
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 8.1e-20 100.9 84 63.1
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 8.1e-20 100.9 69 68.1
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 1.4e-19 100.1 69 69.6
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.0e-19 98.6 67 71.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 5.3e-19 98.2 75 65.3
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 6.9e-19 97.8 69 68.1
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 9.0e-19 97.4 123 42.3
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.5e-18 96.7 124 41.9
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 1.5e-18 96.7 88 55.7
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.5e-18 96.7 93 51.6
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 5.8e-18 94.7 69 68.1
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 7.6e-18 94.4 115 47.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 7.6e-18 94.4 115 47.0
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 2.9e-17 92.4 124 40.3
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 3.8e-17 92.0 64 68.8
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 3.8e-17 92.0 95 51.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 6.5e-17 91.3 103 52.4
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 6.5e-17 91.3 67 62.7
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 8.4e-17 90.9 95 50.5
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 8.4e-17 90.9 118 47.5
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 1.1e-16 90.5 95 50.5
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 1.1e-16 90.5 95 50.5
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 1.4e-16 90.1 120 44.2
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 1.9e-16 89.7 113 44.2
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 1.9e-16 89.7 64 65.6
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 5.5e-16 88.2 85 57.6
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 4.6e-15 85.1 64 60.9
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 2.1e-12 76.3 109 41.3
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.8e-12 75.9 69 59.4
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.4e-11 72.8 51 68.6
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 2.4e-11 72.8 82 45.1
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 8.5e-09 64.3 105 41.9
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.5e-08 62.8 86 45.3


User provided reference genes

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