Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 9.9e-239 829.7 416 100.0
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 5.4e-152 541.6 418 68.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 8.6e-150 534.3 388 70.1
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 2.2e-145 519.6 426 64.3
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 4.9e-145 518.5 372 70.2
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.8e-144 516.5 400 66.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.0e-144 514.6 398 67.1
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 2.7e-143 512.7 372 68.3
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 8.6e-142 507.7 392 66.1
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 1.5e-141 506.9 414 62.8
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 2.5e-141 506.1 403 63.8
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.4e-139 500.4 373 67.8
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.4e-139 500.4 393 64.9
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.8e-139 500.0 419 62.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 3.1e-139 499.2 373 67.3
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 8.9e-139 497.7 373 66.2
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.3e-137 493.8 402 62.9
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 2.9e-137 492.7 424 60.1
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.9e-137 492.7 401 62.3
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.1e-136 490.7 409 61.4
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 2.4e-136 489.6 386 64.2
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 4.1e-136 488.8 397 62.0
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 4.1e-136 488.8 425 60.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 4.1e-136 488.8 373 64.9
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 9.2e-136 487.6 373 64.9
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.7e-135 486.1 409 60.9
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 3.0e-134 482.6 369 65.0
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.0e-134 482.6 388 64.2
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 3.9e-134 482.3 371 65.5
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 5.0e-134 481.9 372 65.1
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 6.6e-134 481.5 372 64.0
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.9e-133 479.9 399 60.7
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 2.5e-133 479.6 372 64.5
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.6e-132 475.7 385 62.9
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 4.7e-132 475.3 371 64.7
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 6.2e-132 474.9 369 64.0
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 6.2e-132 474.9 408 58.6
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.1e-132 474.6 411 60.3
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.8e-131 473.4 369 64.2
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.3e-131 473.0 369 64.2
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 5.2e-131 471.9 411 59.9
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 6.8e-131 471.5 376 63.3
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.2e-130 470.7 400 60.2
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.5e-130 470.3 421 58.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 3.4e-130 469.2 370 63.5
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 5.8e-130 468.4 379 62.8
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 5.8e-130 468.4 406 58.9
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 7.5e-130 468.0 379 62.8
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 2.2e-129 466.5 369 64.0
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 3.7e-129 465.7 373 64.6
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 3.7e-129 465.7 379 62.0
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.1e-128 464.2 377 62.9
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 7.1e-128 461.5 379 61.7
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 9.2e-128 461.1 375 61.3
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 9.2e-128 461.1 375 63.2
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.0e-126 457.6 377 61.5
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 5.1e-126 455.3 418 55.7
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 7.3e-125 451.4 407 58.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 9.5e-125 451.1 372 61.0
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 8.1e-124 448.0 337 64.4
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 2.3e-123 446.4 371 62.0
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 5.2e-123 445.3 375 60.3
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 8.9e-123 444.5 375 61.3
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 1.7e-121 440.3 387 57.6
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 2.2e-121 439.9 375 60.8
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 3.8e-121 439.1 375 60.8
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.4e-120 437.2 375 60.5
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.4e-120 437.2 375 60.5
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 6.0e-119 431.8 381 58.0
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 3.3e-117 426.0 452 52.0
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 4.3e-117 425.6 412 55.3
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.8e-116 422.9 420 55.5
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.8e-115 420.2 386 57.0
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 3.1e-115 419.5 375 58.9
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 4.0e-115 419.1 381 55.4
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 4.0e-115 419.1 367 59.1
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 4.6e-111 405.6 316 64.9
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 5.3e-107 392.1 343 62.4
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.4e-104 383.3 423 49.4
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 4.2e-104 382.5 291 63.9
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 7.1e-104 381.7 401 50.4
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.1e-103 380.2 298 62.8
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 7.4e-101 371.7 406 49.3
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.4e-99 367.5 287 62.0
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 9.9e-98 361.3 307 59.9
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 4.6e-95 352.4 312 57.7
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.3e-85 319.7 312 52.2
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 3.2e-80 303.1 374 46.5
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.5e-77 293.5 232 63.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 4.8e-76 289.3 297 56.9
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.4e-72 277.7 240 59.6
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 9.4e-72 275.0 277 52.0
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.2e-68 263.8 202 60.4
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 8.2e-68 261.9 214 62.6
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.1e-67 261.5 249 56.6
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 5.3e-59 232.6 201 57.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.9e-58 229.2 157 72.6
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.6e-55 221.1 381 36.2
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 6.5e-49 199.1 149 65.8
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.3e-41 174.1 149 59.7
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 4.2e-40 169.9 429 30.8
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 8.6e-33 145.6 129 55.8
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.3e-32 143.7 139 53.2
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 4.4e-29 133.3 90 72.2
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 2.8e-23 114.0 67 79.1
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 4.0e-22 110.2 113 54.9
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 2.3e-17 94.4 88 52.3
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.9e-16 91.3 364 28.0
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 8.1e-15 85.9 366 24.9
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.1e-14 84.0 375 23.7
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.2e-12 77.8 55 61.8
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 6.4e-12 76.3 113 34.5
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 1.1e-11 75.5 371 26.4
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.4e-11 75.1 64 46.9
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 8.6e-09 65.9 68 51.5
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 5.6e-08 63.2 52 67.3
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 2.8e-07 60.8 36 72.2


User provided reference genes

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