Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2053 Punica granatum HOM05D007306 ORTHO05D009112 9.4e-78 293.5 154 100.0
QL07p023738 Quercus lobata HOM05D007306 ORTHO05D009112 1.5e-35 153.3 150 63.3
Prupe.7G077000 Prunus persica HOM05D007306 ORTHO05D009112 1.1e-33 147.1 143 61.5
CiPaw.09G030300 Carya illinoinensis HOM05D007306 ORTHO05D009112 1.9e-33 146.4 149 61.1
Potri.006G192500 Populus trichocarpa HOM05D007306 ORTHO05D009112 2.4e-33 146.0 159 59.1
Nn2g15686 Nelumbo nucifera HOM05D007306 ORTHO05D009112 7.1e-33 144.4 145 60.7
Dinv14300 Davidia involucrata HOM05D007306 ORTHO05D009112 1.2e-32 143.7 145 59.3
Thecc.05G171400 Theobroma cacao HOM05D007306 ORTHO05D009112 2.1e-32 142.9 162 58.0
Cfa020165 Carpinus fangiana HOM05D007306 ORTHO05D009112 2.7e-32 142.5 152 59.2
Gohir.A01G191300 Gossypium hirsutum HOM05D007306 ORTHO05D009112 2.3e-31 139.4 150 58.0
Gorai.002G224300 Gossypium raimondii HOM05D007306 ORTHO05D009112 2.3e-31 139.4 150 58.0
COL.COLO4_33982 Corchorus olitorius HOM05D007306 ORTHO05D009112 3.0e-31 139.0 161 54.7
Gohir.D01G178600 Gossypium hirsutum HOM05D007306 ORTHO05D009112 5.1e-31 138.3 150 58.0
Potri.016G045700 Populus trichocarpa HOM05D007306 ORTHO05D009112 6.6e-31 137.9 160 55.0
MD12G1057100 Malus domestica HOM05D007306 ORTHO05D009112 8.6e-31 137.5 145 58.6
MD14G1057700 Malus domestica HOM05D007306 ORTHO05D009112 1.5e-30 136.7 144 58.3
CANSAT64G1677 Cannabis sativa HOM05D007306 ORTHO05D009112 9.6e-30 134.0 150 56.7
Ciclev10013031m.g Citrus clementina HOM05D007306 ORTHO05D009112 1.2e-29 133.7 154 57.8
Hma1.2p1_0386F.1_g141880 Hydrangea macrophylla HOM05D007306 ORTHO05D009112 2.8e-29 132.5 139 58.3
Atru.chr8.1112 Acer truncatum HOM05D007306 ORTHO05D009112 4.7e-29 131.7 146 57.5
TWI74G1393 Tripterygium wilfordii HOM05D007306 ORTHO05D009112 1.8e-28 129.8 149 58.4
Aqoxy1G00127 Aquilegia oxysepala HOM05D007306 ORTHO05D009112 2.4e-28 129.4 146 54.1
Duzib093G0428 Durio zibethinus HOM05D007306 ORTHO05D009112 5.2e-28 128.3 156 51.3
Cpa.g.sc85.66 Carica papaya HOM05D007306 ORTHO05D009112 2.6e-27 125.9 140 55.7
Lj1g0014955 Lotus japonicus HOM05D007306 ORTHO05D009112 2.6e-27 125.9 140 55.7
FvH4_6g22320 Fragaria vesca HOM05D007306 ORTHO05D009112 3.4e-27 125.6 142 54.9
FAN05G3567 Fragaria x ananassa HOM05D007306 ORTHO05D009112 3.4e-27 125.6 142 54.9
Lalb_Chr18g0047871 Lupinus albus HOM05D007306 ORTHO05D009112 3.4e-27 125.6 140 57.1
FAN14G0362 Fragaria x ananassa HOM05D007306 ORTHO05D009112 5.8e-27 124.8 142 54.9
Peaxi162Scf00258g00720 Petunia axillaris HOM05D007306 ORTHO05D009112 5.8e-27 124.8 140 51.4
CiPaw.10G026400 Carya illinoinensis HOM05D007306 ORTHO05D009112 7.6e-27 124.4 151 57.0
RcHm_v2.0_Chr3g0479681 Rosa chinensis HOM05D007306 ORTHO05D009112 7.6e-27 124.4 143 53.1
FAN09G2453 Fragaria x ananassa HOM05D007306 ORTHO05D009112 9.9e-27 124.0 142 54.9
TAR623G0307 Trochodendron aralioides HOM05D007306 ORTHO05D009112 1.3e-26 123.6 144 56.9
arahy.Tifrunner.gnm1.ann1.I9AM74 Arachis hypogaea HOM05D007306 ORTHO05D009112 1.1e-25 120.6 147 51.7
FAN02G3291 Fragaria x ananassa HOM05D007306 ORTHO05D009112 1.4e-25 120.2 142 52.8
PSO384G4645 Papaver somniferum HOM05D007306 ORTHO05D009112 2.4e-25 119.4 147 47.6
PSO339G5155 Papaver somniferum HOM05D007306 ORTHO05D009112 4.2e-25 118.6 147 47.6
AL4G40480 Arabidopsis lyrata HOM05D007306 ORTHO05D009112 5.4e-25 118.2 139 54.0
arahy.Tifrunner.gnm1.ann1.T0JWFY Arachis hypogaea HOM05D007306 ORTHO05D009112 5.4e-25 118.2 147 51.7
Manes.08G044500 Manihot esculenta HOM05D007306 ORTHO05D009112 5.4e-25 118.2 161 52.2
Psat3g068560 Pisum sativum HOM05D007306 ORTHO05D009112 7.1e-25 117.9 140 53.6
Nitab4.5_0001137g0060 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.2e-24 117.1 142 53.5
Nitab4.5_0007619g0010 Nicotiana tabacum HOM05D007306 ORTHO05D009112 1.2e-24 117.1 140 51.4
C04p03260 Brassica napus HOM05D007306 ORTHO05D009112 1.6e-24 116.7 138 52.2
Sed0004413 Sechium edule HOM05D007306 ORTHO05D009112 6.0e-24 114.8 141 50.4
BcaC02g12458 Brassica carinata HOM05D007306 ORTHO05D009112 7.8e-24 114.4 138 51.4
BcaC02g12459 Brassica carinata HOM05D007306 ORTHO05D009112 7.8e-24 114.4 138 51.4
BolC4t21964H Brassica oleracea HOM05D007306 ORTHO05D009112 7.8e-24 114.4 138 51.4
AT2G42110 Arabidopsis thaliana HOM05D007306 ORTHO05D009112 1.0e-23 114.0 139 51.1
vmacro07907 Vaccinium macrocarpon HOM05D007306 ORTHO05D009112 1.0e-23 114.0 138 52.9
Aa31LG1G24110 Aethionema arabicum HOM05D007306 ORTHO05D009112 2.3e-23 112.8 139 48.9
Sabra16G0049700 Salix brachista HOM05D007306 ORTHO05D009112 2.3e-23 112.8 120 58.3
CARHR137170 Cardamine hirsuta HOM05D007306 ORTHO05D009112 3.0e-23 112.5 139 50.4
TPR.G22157 Trifolium pratense HOM05D007306 ORTHO05D009112 6.6e-23 111.3 140 52.9
BcaNung04408 Brassica carinata HOM05D007306 ORTHO05D009112 8.7e-23 110.9 144 47.9
A05p02730 Brassica napus HOM05D007306 ORTHO05D009112 8.7e-23 110.9 138 51.4
BraA05t19265Z Brassica rapa HOM05D007306 ORTHO05D009112 8.7e-23 110.9 138 51.4
SalBow6G0438 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.7e-23 110.9 139 47.5
SalBow6G2293 Salvia bowleyana HOM05D007306 ORTHO05D009112 8.7e-23 110.9 139 47.5
Actinidia32393 Actinidia chinensis HOM05D007306 ORTHO05D009112 1.1e-22 110.5 137 51.1
Rhsim03G0005900 Rhododendron simsii HOM05D007306 ORTHO05D009112 1.1e-22 110.5 137 50.4
Solyc03g120950.3 Solanum lycopersicum HOM05D007306 ORTHO05D009112 1.5e-22 110.2 138 50.0
Sopen03g039780 Solanum pennellii HOM05D007306 ORTHO05D009112 1.5e-22 110.2 138 50.0
Phvul.007G259800 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 3.3e-22 109.0 137 48.9
Sp4g24320 Schrenkiella parvula HOM05D007306 ORTHO05D009112 5.6e-22 108.2 142 48.6
MSTRG.19909 Avicennia marina HOM05D007306 ORTHO05D009112 7.3e-22 107.8 142 47.9
Cc06_g15870 Coffea canephora HOM05D007306 ORTHO05D009112 1.6e-21 106.7 160 46.9
PGSC0003DMG400002614 Solanum tuberosum HOM05D007306 ORTHO05D009112 2.1e-21 106.3 138 48.6
Thhalv10017403m.g Eutrema salsugineum HOM05D007306 ORTHO05D009112 3.6e-21 105.5 143 46.9
Glyma.03G144700 Glycine max HOM05D007306 ORTHO05D009112 3.6e-21 105.5 146 49.3
Duzib106G0602 Durio zibethinus HOM05D007306 ORTHO05D009112 6.2e-21 104.8 150 46.0
Medtr7g093220 Medicago truncatula HOM05D007306 ORTHO05D009112 1.1e-20 104.0 140 52.1
CsaV3_3G038820 Cucumis sativus L. HOM05D007306 ORTHO05D009112 2.4e-20 102.8 142 45.1
Actinidia22036 Actinidia chinensis HOM05D007306 ORTHO05D009112 5.3e-20 101.7 138 49.3
Migut.J01836 Erythranthe guttata HOM05D007306 ORTHO05D009112 5.3e-20 101.7 152 46.1
Carub.0004s2445 Capsella rubella HOM05D007306 ORTHO05D009112 1.2e-19 100.5 139 47.5
Manes.09G035400 Manihot esculenta HOM05D007306 ORTHO05D009112 2.0e-19 99.8 139 46.0
HanXRQChr13g0390881 Helianthus annuus HOM05D007306 ORTHO05D009112 2.6e-19 99.4 143 45.5
VMungo1383G3094 Vigna mungo HOM05D007306 ORTHO05D009112 3.4e-19 99.0 143 49.0
CAN.G1143.4 Capsicum annuum HOM05D007306 ORTHO05D009112 5.8e-19 98.2 146 47.9
DCAR_017009 Daucus carota HOM05D004472 ORTHO05D007169 5.8e-19 98.2 132 45.5
SGA_v2.0_scaffold69G23062 Striga asiatica HOM05D007306 ORTHO05D009112 5.8e-19 98.2 148 43.2
MBI06_g29488_MAGBIO Magnolia biondii HOM05D007306 ORTHO05D009112 9.9e-19 97.4 132 49.2
ClCG10G017530 Citrullus lanatus HOM05D007306 ORTHO05D009112 1.3e-18 97.1 142 45.1
Oeu063786.1 Olea europaea HOM05D007306 ORTHO05D009112 1.7e-18 96.7 140 47.1
MELO3C009626.2 Cucumis melo HOM05D007306 ORTHO05D009112 2.2e-18 96.3 142 44.4
VMungo0720G2523 Vigna mungo HOM05D007306 ORTHO05D009112 2.2e-18 96.3 142 45.1
Hund24792 Selenicereus undatus HOM05D007306 ORTHO05D009112 2.9e-18 95.9 153 43.8
Phvul.001G142300 Phaseolus vulgaris HOM05D007306 ORTHO05D009112 6.4e-18 94.7 140 48.6
Glyma.19G147700 Glycine max HOM05D007306 ORTHO05D009112 2.4e-17 92.8 139 48.2
Glyma.09G111500 Glycine max HOM05D007306 ORTHO05D009112 9.3e-17 90.9 142 45.8
Lsat_1_v5_gn_5_163480 Lactuca sativa HOM05D007306 ORTHO05D009112 2.7e-16 89.4 157 43.3
GSVIVG01033497001 Vitis vinifera HOM05D007306 ORTHO05D009112 7.3e-14 81.3 142 39.4
ECA248G3448 Erigeron canadensis HOM05D007306 ORTHO05D009112 2.1e-13 79.7 147 39.5
THA.LOC104802563 Tarenaya hassleriana HOM05D007306 ORTHO05D009112 3.6e-13 79.0 139 39.6
AUR62015369 Chenopodium quinoa HOM05D007306 ORTHO05D009112 1.1e-12 77.4 159 39.6
AUR62012035 Chenopodium quinoa HOM05D007306 ORTHO05D009112 4.0e-12 75.5 147 38.8
Sc19g0007100 Simmondsia chinensis HOM05D007306 ORTHO05D009112 3.4e-11 72.4 97 44.3
Ah.04g152480 Amaranthus hybridus HOM05D007306 ORTHO05D009112 7.6e-11 71.2 161 35.4
EL10Ac3g06917 Beta vulgaris HOM05D007306 ORTHO05D009112 6.4e-10 68.2 61 55.7
unitig_22.g6026 Utricularia gibba HOM05D007306 ORTHO05D009112 1.4e-09 67.0 136 40.4
Ca_08521_v3 Cicer arietinum L. HOM05D007306 ORTHO05D009112 3.2e-09 65.9 116 46.6
CDE02G0820 Ceratophyllum demersum HOM05D007306 ORTHO05D009112 5.5e-09 65.1 144 38.2
Os03g0128300 Oryza sativa ssp. japonica HOM05D007306 ORTHO05D009112 3.5e-08 62.4 165 34.5
Haze_19991 Corylus avellana HOM05D000267 ORTHO05D000298 1.8e-07 60.1 30 86.7
CSS0009036 Camellia sinensis var. sinensis HOM05D007306 ORTHO05D009112 3.0e-07 59.3 92 40.2
Sed0003989 Sechium edule HOM05D007306 ORTHO05D009112 8.7e-07 57.8 100 36.0


User provided reference genes

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