Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2035 Punica granatum HOM05D006353 ORTHO05D007993 3.7e-202 708.0 354 100.0
Eucgr.K01277 Eucalyptus grandis HOM05D006353 ORTHO05D007993 1.7e-42 177.6 364 36.0
Atru.chr8.2382 Acer truncatum HOM05D006353 ORTHO05D007993 9.8e-38 161.8 357 31.7
Cfa017056 Carpinus fangiana HOM05D006353 ORTHO05D007993 3.7e-37 159.8 342 34.2
A05p07550 Brassica napus HOM05D006353 ORTHO05D007993 2.4e-36 157.1 347 31.7
BraA05t19722Z Brassica rapa HOM05D006353 ORTHO05D007993 2.4e-36 157.1 347 31.7
Dinv25324 Davidia involucrata HOM05D006353 ORTHO05D007993 7.0e-36 155.6 336 33.9
BcaB02g09176 Brassica carinata HOM05D006353 ORTHO05D007993 4.6e-35 152.9 346 31.8
Thecc.04G154100 Theobroma cacao HOM05D006353 ORTHO05D007993 6.0e-35 152.5 340 33.2
Actinidia11518 Actinidia chinensis HOM05D006353 ORTHO05D007993 7.8e-35 152.1 351 34.2
BcaC02g12001 Brassica carinata HOM05D006353 ORTHO05D007993 1.7e-34 151.0 346 31.5
Potri.016G134500 Populus trichocarpa HOM05D006353 ORTHO05D007993 3.0e-34 150.2 350 32.6
GSVIVG01030203001 Vitis vinifera HOM05D006353 ORTHO05D007993 3.0e-34 150.2 354 33.9
Rhsim05G0229500 Rhododendron simsii HOM05D006353 ORTHO05D007993 6.6e-34 149.1 346 33.5
THA.LOC104806639 Tarenaya hassleriana HOM05D006353 ORTHO05D007993 6.6e-34 149.1 364 31.6
C04p09030 Brassica napus HOM05D006353 ORTHO05D007993 4.3e-33 146.4 339 30.7
BolC4t22493H Brassica oleracea HOM05D006353 ORTHO05D007993 4.3e-33 146.4 339 30.7
Lalb_Chr19g0124031 Lupinus albus HOM05D006353 ORTHO05D007993 5.6e-33 146.0 356 31.5
CiPaw.09G219300 Carya illinoinensis HOM05D006353 ORTHO05D007993 7.3e-33 145.6 342 32.2
TAR636G2144 Trochodendron aralioides HOM05D006353 ORTHO05D007993 7.3e-33 145.6 345 31.6
vmacro20360 Vaccinium macrocarpon HOM05D006353 ORTHO05D007993 7.3e-33 145.6 341 31.4
Sabra04G0151900 Salix brachista HOM05D006353 ORTHO05D007993 6.2e-32 142.5 342 31.0
TWI74G0177 Tripterygium wilfordii HOM05D006353 ORTHO05D007993 1.1e-31 141.7 353 29.7
AT2G38500 Arabidopsis thaliana HOM05D006353 ORTHO05D007993 1.4e-31 141.4 351 30.2
CARHR133200 Cardamine hirsuta HOM05D006353 ORTHO05D007993 2.3e-31 140.6 337 29.4
AL4G35790 Arabidopsis lyrata HOM05D006353 ORTHO05D007993 3.1e-31 140.2 351 29.6
Duzib212G0771 Durio zibethinus HOM05D006353 ORTHO05D007993 3.1e-31 140.2 340 31.8
Migut.J00057 Erythranthe guttata HOM05D006353 ORTHO05D007993 3.1e-31 140.2 358 32.1
Sp4g20840 Schrenkiella parvula HOM05D006353 ORTHO05D007993 4.0e-31 139.8 335 29.9
Thhalv10016859m.g Eutrema salsugineum HOM05D006353 ORTHO05D007993 5.2e-31 139.4 329 29.2
Manes.09G116500 Manihot esculenta HOM05D006353 ORTHO05D007993 5.2e-31 139.4 345 31.6
Ciclev10012094m.g Citrus clementina HOM05D006353 ORTHO05D007993 6.8e-31 139.0 348 30.7
Aa31LG5G23800 Aethionema arabicum HOM05D006353 ORTHO05D007993 8.9e-31 138.7 326 30.4
Haze_21157 Corylus avellana HOM05D006353 ORTHO05D007993 2.6e-30 137.1 284 35.6
MSTRG.18951 Avicennia marina HOM05D006353 ORTHO05D007993 3.4e-30 136.7 361 31.0
BcaC01g05532 Brassica carinata HOM05D006353 ORTHO05D007993 3.4e-30 136.7 331 29.3
C03p25230 Brassica napus HOM05D006353 ORTHO05D007993 3.4e-30 136.7 331 29.3
BolC3t14918H Brassica oleracea HOM05D006353 ORTHO05D007993 3.4e-30 136.7 331 29.3
BraA03t11371Z Brassica rapa HOM05D006353 ORTHO05D007993 5.8e-30 136.0 331 29.0
Gorai.011G129000 Gossypium raimondii HOM05D006353 ORTHO05D007993 7.5e-30 135.6 337 30.0
Carub.0004s2049 Capsella rubella HOM05D006353 ORTHO05D007993 9.9e-30 135.2 345 29.9
Gohir.A10G149700 Gossypium hirsutum HOM05D006353 ORTHO05D007993 1.3e-29 134.8 337 30.0
A03p21360 Brassica napus HOM05D006353 ORTHO05D007993 3.7e-29 133.3 331 28.7
arahy.Tifrunner.gnm1.ann1.0YL58U Arachis hypogaea HOM05D006353 ORTHO05D007993 6.4e-29 132.5 354 29.7
arahy.Tifrunner.gnm1.ann1.FA4IPG Arachis hypogaea HOM05D006353 ORTHO05D007993 6.4e-29 132.5 354 29.7
MD12G1185800 Malus domestica HOM05D006353 ORTHO05D007993 1.4e-28 131.3 357 30.8
CSS0001064 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 1.9e-28 131.0 297 35.4
RcHm_v2.0_Chr3g0460831 Rosa chinensis HOM05D006353 ORTHO05D007993 1.9e-28 131.0 357 30.3
Gohir.D10G117100 Gossypium hirsutum HOM05D006353 ORTHO05D007993 2.4e-28 130.6 337 29.4
Prupe.6G291400 Prunus persica HOM05D006353 ORTHO05D007993 2.4e-28 130.6 360 30.3
Phvul.008G084100 Phaseolus vulgaris HOM05D006353 ORTHO05D007993 5.4e-28 129.4 355 31.0
Glyma.18G215200 Glycine max HOM05D006353 ORTHO05D007993 7.1e-28 129.0 357 31.1
BcaB01g03677 Brassica carinata HOM05D006353 ORTHO05D007993 1.2e-27 128.3 329 28.3
FAN05G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 1.6e-27 127.9 351 29.1
FAN09G0411 Fragaria x ananassa HOM05D006353 ORTHO05D007993 1.6e-27 127.9 345 30.4
CSS0032329 Camellia sinensis var. sinensis HOM05D006353 ORTHO05D007993 3.5e-27 126.7 274 36.1
QL07p032560 Quercus lobata HOM05D006353 ORTHO05D007993 1.7e-26 124.4 281 33.8
FAN14G4939 Fragaria x ananassa HOM05D006353 ORTHO05D007993 8.6e-26 122.1 351 29.1
Lj1g0007888 Lotus japonicus HOM05D006353 ORTHO05D007993 8.6e-26 122.1 343 31.2
Manes.08G173800 Manihot esculenta HOM05D006353 ORTHO05D007993 1.5e-25 121.3 357 30.3
Duzib151G0311 Durio zibethinus HOM05D006353 ORTHO05D007993 1.9e-25 120.9 278 32.0
FvH4_6g10130 Fragaria vesca HOM05D006353 ORTHO05D007993 1.9e-25 120.9 351 29.1
VMungo1383G2355 Vigna mungo HOM05D006353 ORTHO05D007993 1.9e-25 120.9 314 32.5
HanXRQChr14g0433401 Helianthus annuus HOM05D006353 ORTHO05D007993 2.5e-25 120.6 351 29.3
Medtr7g072635 Medicago truncatula HOM05D006353 ORTHO05D007993 5.6e-25 119.4 352 28.4
Medtr7g072870 Medicago truncatula HOM05D006353 ORTHO05D007993 5.6e-25 119.4 352 28.4
PGSC0003DMG400004416 Solanum tuberosum HOM05D006353 ORTHO05D007993 1.2e-24 118.2 321 30.8
EL10Ac7g17070 Beta vulgaris HOM05D006353 ORTHO05D007993 1.6e-24 117.9 344 29.7
AUR62006369 Chenopodium quinoa HOM05D006353 ORTHO05D007993 1.6e-24 117.9 343 29.7
Sopen09g010850 Solanum pennellii HOM05D006353 ORTHO05D007993 2.1e-24 117.5 319 30.1
PSO384G2070 Papaver somniferum HOM05D006353 ORTHO05D007993 6.2e-24 115.9 381 28.3
Sc07g0005810 Simmondsia chinensis HOM05D006353 ORTHO05D007993 6.2e-24 115.9 332 28.3
Sc20g0006870 Simmondsia chinensis HOM05D006353 ORTHO05D007993 1.1e-23 115.2 316 28.8
Dinv11379 Davidia involucrata HOM05D006353 ORTHO05D007993 1.4e-23 114.8 217 37.3
PSO339G6092 Papaver somniferum HOM05D006353 ORTHO05D007993 3.4e-22 110.2 376 27.9
FAN05G5674 Fragaria x ananassa HOM05D006353 ORTHO05D007993 4.4e-22 109.8 348 29.3
Lsat_1_v5_gn_8_107941 Lactuca sativa HOM05D006353 ORTHO05D007993 5.8e-22 109.4 350 26.3
Oeu026960.1 Olea europaea HOM05D006353 ORTHO05D007993 7.6e-22 109.0 363 29.8
SalBow5G5035 Salvia bowleyana HOM05D006353 ORTHO05D007993 1.3e-21 108.2 353 28.6
ECA248G0672 Erigeron canadensis HOM05D006353 ORTHO05D007993 2.9e-21 107.1 348 26.7
SalBow5G5483 Salvia bowleyana HOM05D006353 ORTHO05D007993 3.8e-21 106.7 353 28.3
BcaB01g03678 Brassica carinata HOM05D006353 ORTHO05D007993 1.1e-20 105.1 330 27.9
HanXRQChr16g0509461 Helianthus annuus HOM05D006353 ORTHO05D007993 1.4e-20 104.8 360 27.5
ECA236G3817 Erigeron canadensis HOM05D006353 ORTHO05D007993 1.9e-20 104.4 346 27.5
Nn2g10337 Nelumbo nucifera HOM05D006353 ORTHO05D007993 9.2e-20 102.1 352 29.0
CANSAT35G0573 Cannabis sativa HOM05D006353 ORTHO05D007993 4.6e-19 99.8 350 27.7
Ah.08g209640 Amaranthus hybridus HOM05D006353 ORTHO05D007993 7.8e-19 99.0 272 30.1
AUR62029702 Chenopodium quinoa HOM05D006353 ORTHO05D007993 5.1e-18 96.3 275 29.8
Actinidia29043 Actinidia chinensis HOM05D006353 ORTHO05D007993 6.6e-18 95.9 185 37.3
Sed0002935 Sechium edule HOM05D006353 ORTHO05D007993 4.3e-17 93.2 340 28.8
Hund19788 Selenicereus undatus HOM05D006353 ORTHO05D007993 4.3e-17 93.2 295 28.5
MELO3C025210.2 Cucumis melo HOM05D006353 ORTHO05D007993 5.6e-17 92.8 287 30.7
CsaV3_4G027090 Cucumis sativus L. HOM05D006353 ORTHO05D007993 5.6e-17 92.8 346 28.6
Lsat_1_v5_gn_5_150140 Lactuca sativa HOM05D006353 ORTHO05D007993 2.8e-16 90.5 269 29.0
CiPaw.09G219500 Carya illinoinensis HOM05D006353 ORTHO05D007993 2.4e-15 87.4 129 41.1
ClCG04G006410 Citrullus lanatus HOM05D006353 ORTHO05D007993 4.0e-15 86.7 332 25.6
DCAR_018544 Daucus carota HOM05D006353 ORTHO05D007993 5.3e-15 86.3 346 26.6
Nitab4.5_0003003g0010 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.5e-14 84.7 114 39.5
COL.COLO4_16552 Corchorus olitorius HOM05D006353 ORTHO05D007993 5.8e-14 82.8 146 37.0
BcaB02g09177 Brassica carinata HOM05D006353 ORTHO05D007993 7.6e-14 82.4 100 41.0
Peaxi162Scf00732g00043 Petunia axillaris HOM05D006353 ORTHO05D007993 1.7e-13 81.3 102 43.1
Peaxi162Scf00038g00918 Petunia axillaris HOM05D006831 ORTHO05D008256 2.2e-13 80.9 389 24.9
Rhsim08G0227100 Rhododendron simsii HOM05D006831 ORTHO05D008256 3.8e-13 80.1 380 27.1
Actinidia21708 Actinidia chinensis HOM05D006831 ORTHO05D008256 1.4e-12 78.2 380 24.5
Nitab4.5_0001469g0020 Nicotiana tabacum HOM05D006353 ORTHO05D007993 1.9e-12 77.8 110 38.2
TAR383G0884 Trochodendron aralioides HOM05D006831 ORTHO05D008256 2.4e-12 77.4 368 23.4
FAN02G1449 Fragaria x ananassa HOM05D006353 ORTHO05D007993 7.1e-12 75.9 314 25.5
Psat3g120040 Pisum sativum HOM05D006353 ORTHO05D007993 9.3e-12 75.5 212 32.5
Prupe.3G060100 Prunus persica HOM05D006831 ORTHO05D008256 1.2e-11 75.1 366 27.3
ATR0681G315 Amborella trichopoda HOM05D006353 ORTHO05D007993 2.7e-11 73.9 107 38.3
Solyc03g120970.3 Solanum lycopersicum HOM05D006831 ORTHO05D008256 6.0e-11 72.8 126 36.5
Ca_07754_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 7.8e-11 72.4 209 30.1
Ca_29600_v3 Cicer arietinum L. HOM05D006353 ORTHO05D007993 7.8e-11 72.4 209 30.1
HPP92_022856 Vanilla planifolia HOM05D006353 ORTHO05D007993 1.0e-10 72.0 345 25.8
Sopen03g039800 Solanum pennellii HOM05D006831 ORTHO05D008256 1.7e-10 71.2 126 35.7
DCAR_016191 Daucus carota HOM05D006831 ORTHO05D008256 2.3e-10 70.9 353 25.5
Lj5A54G57 Lonicera japonica HOM05D006831 ORTHO05D008256 3.0e-10 70.5 362 23.5
QL05p020342 Quercus lobata HOM05D006831 ORTHO05D008256 3.0e-10 70.5 368 23.9
Atru.chr1.3517 Acer truncatum HOM05D006831 ORTHO05D008256 5.1e-10 69.7 373 23.1
PGSC0003DMG400002528 Solanum tuberosum HOM05D006831 ORTHO05D008256 8.7e-10 68.9 109 37.6
ATR0705G209 Amborella trichopoda HOM05D006831 ORTHO05D008256 1.5e-09 68.2 123 32.5
TPR.G26913 Trifolium pratense HOM05D006353 ORTHO05D007993 1.5e-09 68.2 188 28.7
TAR626G1633 Trochodendron aralioides HOM05D006831 ORTHO05D008256 1.9e-09 67.8 372 23.9
Nitab4.5_0012387g0010 Nicotiana tabacum HOM05D006831 ORTHO05D008256 2.5e-09 67.4 126 33.3
Dinv30442 Davidia involucrata HOM05D006831 ORTHO05D008256 3.3e-09 67.0 375 22.4
TWI12G0407 Tripterygium wilfordii HOM05D006831 ORTHO05D008256 3.3e-09 67.0 368 23.1
vmacro18857 Vaccinium macrocarpon HOM05D006831 ORTHO05D008256 3.3e-09 67.0 381 22.8
CANSAT56G0873 Cannabis sativa HOM05D006831 ORTHO05D008256 4.3e-09 66.6 387 21.7
AUR62031907 Chenopodium quinoa HOM05D006831 ORTHO05D008256 5.6e-09 66.2 370 23.0
Nn6g35309 Nelumbo nucifera HOM05D006831 ORTHO05D008256 5.6e-09 66.2 366 23.5
RcHm_v2.0_Chr2g0140341 Rosa chinensis HOM05D006831 ORTHO05D008256 7.3e-09 65.9 375 22.7
CiPaw.02G146100 Carya illinoinensis HOM05D006831 ORTHO05D008256 9.6e-09 65.5 365 23.8
CSS0014632 Camellia sinensis var. sinensis HOM05D006831 ORTHO05D008256 1.3e-08 65.1 383 22.7
CAN.G1143.6 Capsicum annuum HOM05D006831 ORTHO05D008256 1.3e-08 65.1 368 22.6
Thecc.06G098700 Theobroma cacao HOM05D006831 ORTHO05D008256 1.6e-08 64.7 366 21.6
FAN02G3719 Fragaria x ananassa HOM05D006831 ORTHO05D008256 2.1e-08 64.3 384 23.4
MSTRG.11030 Avicennia marina HOM05D006831 ORTHO05D008256 4.8e-08 63.2 373 22.0
Cfa003655 Carpinus fangiana HOM05D006831 ORTHO05D008256 4.8e-08 63.2 358 24.9
CiPaw.01G232000 Carya illinoinensis HOM05D006831 ORTHO05D008256 4.8e-08 63.2 120 30.8
Ciclev10025849m.g Citrus clementina HOM05D006831 ORTHO05D008256 4.8e-08 63.2 296 23.6
Nitab4.5_0009505g0020 Nicotiana tabacum HOM05D006831 ORTHO05D008256 4.8e-08 63.2 126 31.7
SGA_v2.0_scaffold66G22536 Striga asiatica HOM05D001613 ORTHO05D008256 6.2e-08 62.8 106 34.9
Sabra01G0151300 Salix brachista HOM05D006831 ORTHO05D008256 8.1e-08 62.4 369 22.0
FAN05G2796 Fragaria x ananassa HOM05D006831 ORTHO05D008256 1.1e-07 62.0 370 23.0
FAN14G1280 Fragaria x ananassa HOM05D006831 ORTHO05D008256 1.1e-07 62.0 352 23.9
TPR.G29201 Trifolium pratense HOM05D006831 ORTHO05D008256 1.1e-07 62.0 191 28.3
Cc04_g02630 Coffea canephora HOM05D006831 ORTHO05D008256 1.4e-07 61.6 109 32.1
Haze_06254 Corylus avellana HOM05D006831 ORTHO05D008256 1.4e-07 61.6 197 26.4
FvH4_6g32300 Fragaria vesca HOM05D006831 ORTHO05D008256 3.1e-07 60.5 105 33.3
CsaV3_3G023650 Cucumis sativus L. HOM05D006831 ORTHO05D008256 4.0e-07 60.1 91 37.4
Hma1.2p1_0430F.1_g151466 Hydrangea macrophylla HOM05D006831 ORTHO05D008256 4.0e-07 60.1 94 36.2
Manes.11G034300 Manihot esculenta HOM05D006831 ORTHO05D008256 4.0e-07 60.1 91 37.4
MD09G1204500 Malus domestica HOM05D006831 ORTHO05D008256 5.3e-07 59.7 104 38.5
SGA_v2.0_scaffold85G26642 Striga asiatica HOM05D006353 ORTHO05D007993 5.3e-07 59.7 105 34.3
Os01g0823400 Oryza sativa ssp. japonica HOM05D006353 ORTHO05D007993 6.9e-07 59.3 355 26.5
ClCG00G002730 Citrullus lanatus HOM05D006831 ORTHO05D008256 9.0e-07 58.9 91 37.4
ClCG07G013280 Citrullus lanatus HOM05D006831 ORTHO05D008256 9.0e-07 58.9 91 37.4
MBI04_g30107_MAGBIO Magnolia biondii HOM05D006831 ORTHO05D008256 9.0e-07 58.9 370 24.3
arahy.Tifrunner.gnm1.ann1.4LXS91 Arachis hypogaea HOM05D006831 ORTHO05D008256 1.2e-06 58.5 371 22.6
Duzib235G1306 Durio zibethinus HOM05D006831 ORTHO05D008256 1.2e-06 58.5 116 31.9
Gohir.A10G066100 Gossypium hirsutum HOM05D006831 ORTHO05D008256 1.2e-06 58.5 116 31.9
Gorai.011G071900 Gossypium raimondii HOM05D006831 ORTHO05D008256 1.2e-06 58.5 116 31.9
Lsat_1_v5_gn_1_36980 Lactuca sativa HOM05D006831 ORTHO05D008256 1.2e-06 58.5 304 25.3
Hma1.2p1_1052F.1_g252320 Hydrangea macrophylla HOM05D006353 ORTHO05D007993 1.5e-06 58.2 116 36.2
Oeu050599.1 Olea europaea HOM05D006831 ORTHO05D008256 1.5e-06 58.2 367 24.0
Gohir.D03G058400 Gossypium hirsutum HOM05D006831 ORTHO05D008256 2.0e-06 57.8 106 32.1
Gorai.003G062200 Gossypium raimondii HOM05D006831 ORTHO05D008256 2.0e-06 57.8 106 32.1
Potri.001G189400 Populus trichocarpa HOM05D006831 ORTHO05D008256 2.0e-06 57.8 368 21.7
Eucgr.F03071 Eucalyptus grandis HOM05D006831 ORTHO05D008256 3.4e-06 57.0 199 26.6
Medtr8g014330 Medicago truncatula HOM05D006831 ORTHO05D008256 3.4e-06 57.0 92 37.0
Gohir.A02G117700 Gossypium hirsutum HOM05D006831 ORTHO05D008256 7.6e-06 55.8 106 31.1
arahy.Tifrunner.gnm1.ann1.U3LBHC Arachis hypogaea HOM05D006831 ORTHO05D008256 9.9e-06 55.5 370 22.4


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