Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G2031 Punica granatum HOM05D006230 ORTHO05D007598 7.1e-78 293.9 152 100.0
Atru.chr4.1981 Acer truncatum HOM05D006230 ORTHO05D007598 2.4e-49 199.1 152 70.4
CSS0007771 Camellia sinensis var. sinensis HOM05D006230 ORTHO05D007598 2.6e-48 195.7 151 70.2
Eucgr.H02995 Eucalyptus grandis HOM05D006230 ORTHO05D007598 4.5e-48 194.9 151 74.2
Cfa014753 Carpinus fangiana HOM05D006230 ORTHO05D007598 7.7e-48 194.1 152 70.4
Dinv27088 Davidia involucrata HOM05D006230 ORTHO05D007598 3.8e-47 191.8 151 69.5
Haze_11428 Corylus avellana HOM05D006230 ORTHO05D007598 1.1e-46 190.3 152 69.1
Cpa.g.sc44.25 Carica papaya HOM05D006230 ORTHO05D007598 5.5e-46 188.0 153 68.0
Ciclev10006136m.g Citrus clementina HOM05D006230 ORTHO05D007598 1.2e-45 186.8 155 71.0
THA.LOC104801077 Tarenaya hassleriana HOM05D006230 ORTHO05D007598 1.6e-45 186.4 135 74.8
Gohir.D02G047000 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.1e-45 186.0 121 81.0
CiPaw.02G108600 Carya illinoinensis HOM05D006230 ORTHO05D007598 3.6e-45 185.3 155 69.0
Gorai.005G052000 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.6e-45 185.3 121 81.0
Potri.010G068500 Populus trichocarpa HOM05D006230 ORTHO05D007598 1.4e-44 183.3 149 70.5
Gohir.A02G041200 Gossypium hirsutum HOM05D006230 ORTHO05D007598 1.8e-44 183.0 121 80.2
Lj6g0026311 Lotus japonicus HOM05D006230 ORTHO05D007598 1.8e-44 183.0 139 72.7
Sabra10G0038500 Salix brachista HOM05D006230 ORTHO05D007598 1.8e-44 183.0 149 70.5
Sed0015876 Sechium edule HOM05D006230 ORTHO05D007598 1.8e-44 183.0 151 65.6
COL.COLO4_15930 Corchorus olitorius HOM05D006230 ORTHO05D007598 3.0e-44 182.2 128 77.3
GSVIVG01027870001 Vitis vinifera HOM05D006230 ORTHO05D007598 3.9e-44 181.8 118 79.7
Duzib151G0304 Durio zibethinus HOM05D006230 ORTHO05D007598 5.2e-44 181.4 128 75.8
Lsat_1_v5_gn_2_39681 Lactuca sativa HOM05D006230 ORTHO05D007598 8.8e-44 180.6 151 64.9
Thecc.04G260000 Theobroma cacao HOM05D006230 ORTHO05D007598 8.8e-44 180.6 154 68.2
TWI73G0434 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 1.1e-43 180.3 127 74.0
Sc13g0005900 Simmondsia chinensis HOM05D006230 ORTHO05D007598 1.5e-43 179.9 152 68.4
Lalb_Chr03g0037521 Lupinus albus HOM05D006230 ORTHO05D007598 2.0e-43 179.5 158 65.2
QL06p019992 Quercus lobata HOM05D006230 ORTHO05D007598 2.0e-43 179.5 165 66.1
Duzib212G0996 Durio zibethinus HOM05D006230 ORTHO05D007598 3.3e-43 178.7 146 67.1
CANSAT78G0232 Cannabis sativa HOM05D006230 ORTHO05D007598 5.7e-43 177.9 150 66.0
Sp1g03290 Schrenkiella parvula HOM05D006230 ORTHO05D007598 7.4e-43 177.6 132 75.0
Psat6g103800 Pisum sativum HOM05D006230 ORTHO05D007598 9.7e-43 177.2 153 66.0
Actinidia20827 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.3e-42 176.8 116 76.7
AUR62015538 Chenopodium quinoa HOM05D006230 ORTHO05D007598 1.3e-42 176.8 151 62.9
CsaV3_3G011880 Cucumis sativus L. HOM05D006230 ORTHO05D007598 1.3e-42 176.8 155 64.5
Hma1.2p1_0112F.1_g054490 Hydrangea macrophylla HOM05D006230 ORTHO05D007598 1.3e-42 176.8 151 62.9
Manes.15G043800 Manihot esculenta HOM05D006230 ORTHO05D007598 1.3e-42 176.8 153 66.7
Prupe.1G045100 Prunus persica HOM05D006230 ORTHO05D007598 1.3e-42 176.8 153 64.7
BcaB02g10562 Brassica carinata HOM05D006230 ORTHO05D007598 1.7e-42 176.4 140 72.9
Lalb_Chr01g0020881 Lupinus albus HOM05D006230 ORTHO05D007598 1.7e-42 176.4 133 71.4
Sed0003219 Sechium edule HOM05D006230 ORTHO05D007598 2.2e-42 176.0 152 63.8
CANSAT78G0887 Cannabis sativa HOM05D006230 ORTHO05D007598 2.8e-42 175.6 147 66.0
ClCG05G004160 Citrullus lanatus HOM05D006230 ORTHO05D007598 2.8e-42 175.6 122 74.6
Carub.0001s0365 Capsella rubella HOM05D006230 ORTHO05D007598 3.7e-42 175.3 126 75.4
TAR636G3560 Trochodendron aralioides HOM05D006230 ORTHO05D007598 4.8e-42 174.9 153 64.1
FvH4_4g04200 Fragaria vesca HOM05D006230 ORTHO05D007598 6.3e-42 174.5 151 65.6
Glyma.10G002600 Glycine max HOM05D006230 ORTHO05D007598 6.3e-42 174.5 126 73.8
MD16G1223800 Malus domestica HOM05D006230 ORTHO05D007598 6.3e-42 174.5 150 64.7
TWI53G0221 Tripterygium wilfordii HOM05D006230 ORTHO05D007598 6.3e-42 174.5 116 75.0
Ca_05177_v3 Cicer arietinum L. HOM05D006230 ORTHO05D007598 8.2e-42 174.1 120 75.8
Potri.008G169800 Populus trichocarpa HOM05D006230 ORTHO05D007598 8.2e-42 174.1 119 77.3
HanXRQChr14g0434851 Helianthus annuus HOM05D006230 ORTHO05D007598 1.1e-41 173.7 131 71.0
Actinidia35808 Actinidia chinensis HOM05D006230 ORTHO05D007598 1.4e-41 173.3 141 65.2
Aa31LG5G3840 Aethionema arabicum HOM05D006230 ORTHO05D007598 1.4e-41 173.3 134 71.6
MELO3C006400.2 Cucumis melo HOM05D006230 ORTHO05D007598 1.4e-41 173.3 155 63.2
EL10Ac3g04971 Beta vulgaris HOM05D006230 ORTHO05D007598 1.8e-41 172.9 156 60.9
FAN12G2171 Fragaria x ananassa HOM05D006230 ORTHO05D007598 1.8e-41 172.9 151 64.9
Sp4g15790 Schrenkiella parvula HOM05D006230 ORTHO05D007598 1.8e-41 172.9 126 76.2
PSO063G4949 Papaver somniferum HOM05D006230 ORTHO05D007598 2.4e-41 172.6 120 77.5
Aqoxy2G03714 Aquilegia oxysepala HOM05D006230 ORTHO05D007598 3.1e-41 172.2 158 65.8
Gorai.011G177300 Gossypium raimondii HOM05D006230 ORTHO05D007598 3.1e-41 172.2 125 75.2
BcaB06g28689 Brassica carinata HOM05D006230 ORTHO05D007598 4.1e-41 171.8 131 71.8
Cc03_g05900 Coffea canephora HOM05D006230 ORTHO05D007598 4.1e-41 171.8 138 65.9
Thhalv10017390m.g Eutrema salsugineum HOM05D006230 ORTHO05D007598 5.3e-41 171.4 140 70.7
RcHm_v2.0_Chr4g0394691 Rosa chinensis HOM05D006230 ORTHO05D007598 5.3e-41 171.4 151 64.2
Gohir.D10G157800 Gossypium hirsutum HOM05D006230 ORTHO05D007598 7.0e-41 171.0 122 75.4
Nitab4.5_0001425g0090 Nicotiana tabacum HOM05D006230 ORTHO05D007598 7.0e-41 171.0 127 74.0
Oeu023312.1 Olea europaea HOM05D006230 ORTHO05D007598 7.0e-41 171.0 123 73.2
Phvul.007G278700 Phaseolus vulgaris HOM05D006230 ORTHO05D007598 7.0e-41 171.0 120 76.7
AL4G29120 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 9.1e-41 170.6 136 70.6
PSO017G6779 Papaver somniferum HOM05D006230 ORTHO05D007598 9.1e-41 170.6 120 76.7
AL1G14110 Arabidopsis lyrata HOM05D006230 ORTHO05D007598 1.6e-40 169.9 130 72.3
A04p25750 Brassica napus HOM05D006230 ORTHO05D007598 1.6e-40 169.9 131 71.0
BcaC02g07821 Brassica carinata HOM05D006230 ORTHO05D007598 2.0e-40 169.5 132 70.5
CAN.G220.45 Capsicum annuum HOM05D006230 ORTHO05D007598 2.0e-40 169.5 134 67.9
Gohir.A10G109400 Gossypium hirsutum HOM05D006230 ORTHO05D007598 2.0e-40 169.5 126 73.8
FAN17G1889 Fragaria x ananassa HOM05D006230 ORTHO05D007598 2.6e-40 169.1 151 63.6
Hund11917 Selenicereus undatus HOM05D006230 ORTHO05D007598 3.5e-40 168.7 152 60.5
AT2G33450 Arabidopsis thaliana HOM05D006230 ORTHO05D007598 4.5e-40 168.3 136 69.9
BolC4t27775H Brassica oleracea HOM05D006230 ORTHO05D007598 4.5e-40 168.3 132 71.2
BraA04t18078Z Brassica rapa HOM05D006230 ORTHO05D007598 4.5e-40 168.3 132 71.2
Carub.0004s1508 Capsella rubella HOM05D006230 ORTHO05D007598 4.5e-40 168.3 136 70.6
BcaC02g11431 Brassica carinata HOM05D006230 ORTHO05D007598 5.9e-40 167.9 127 74.0
C04p15650 Brassica napus HOM05D006230 ORTHO05D007598 5.9e-40 167.9 127 74.0
CARHR127460 Cardamine hirsuta HOM05D006230 ORTHO05D007598 5.9e-40 167.9 136 69.9
Peaxi162Scf00602g00421 Petunia axillaris HOM05D006230 ORTHO05D007598 5.9e-40 167.9 115 77.4
Medtr1g041320 Medicago truncatula HOM05D006230 ORTHO05D007598 1.7e-39 166.4 153 62.1
Solyc09g090410.3 Solanum lycopersicum HOM05D006230 ORTHO05D007598 1.7e-39 166.4 150 60.7
Nitab4.5_0006936g0040 Nicotiana tabacum HOM05D006230 ORTHO05D007598 2.2e-39 166.0 135 68.9
ATR0736G074 Amborella trichopoda HOM05D006230 ORTHO05D007598 2.9e-39 165.6 119 73.1
C04p62980 Brassica napus HOM05D006230 ORTHO05D007598 2.9e-39 165.6 126 73.0
PGSC0003DMG400017161 Solanum tuberosum HOM05D006230 ORTHO05D007598 2.9e-39 165.6 150 61.3
vmacro08530 Vaccinium macrocarpon HOM05D006230 ORTHO05D007598 3.8e-39 165.2 152 61.2
Sopen09g033320 Solanum pennellii HOM05D006230 ORTHO05D007598 5.0e-39 164.9 125 69.6
TPR.G32792 Trifolium pratense HOM05D006230 ORTHO05D007598 8.5e-39 164.1 121 72.7
DCAR_002306 Daucus carota HOM05D006230 ORTHO05D007598 1.9e-38 162.9 156 62.2
Zm00001eb222850 Zea mays HOM05D006230 ORTHO05D007598 1.9e-38 162.9 126 70.6
ECA234G3973 Erigeron canadensis HOM05D006230 ORTHO05D007598 4.2e-38 161.8 120 70.0
Migut.G00496 Erythranthe guttata HOM05D006230 ORTHO05D007598 4.2e-38 161.8 122 68.9
Os05g0101400 Oryza sativa ssp. japonica HOM05D006230 ORTHO05D007598 9.4e-38 160.6 153 64.7
BolC4t23134H Brassica oleracea HOM05D006230 ORTHO05D007598 2.7e-37 159.1 128 71.9
CDE05G0971 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 6.1e-37 157.9 85 90.6
HPP92_012809 Vanilla planifolia HOM05D006230 ORTHO05D007598 2.3e-36 156.0 145 62.1
CDE11G0022 Ceratophyllum demersum HOM05D006230 ORTHO05D007598 3.0e-36 155.6 150 61.3
MD13G1218400 Malus domestica HOM05D006230 ORTHO05D007598 3.0e-36 155.6 124 70.2
Oeu059405.1 Olea europaea HOM05D006230 ORTHO05D007598 1.5e-35 153.3 159 56.0
arahy.Tifrunner.gnm1.ann1.ADZ0J4 Arachis hypogaea HOM05D006230 ORTHO05D007598 2.0e-35 152.9 78 96.2
Zm00001eb047510 Zea mays HOM05D006230 ORTHO05D007598 3.3e-35 152.1 158 60.1
SalBow3G4585 Salvia bowleyana HOM05D006230 ORTHO05D007598 5.7e-35 151.4 137 59.1
SGA_v2.0_scaffold67G22731 Striga asiatica HOM05D006230 ORTHO05D007598 5.7e-35 151.4 123 65.9
Thecc.10G124200 Theobroma cacao HOM05D006230 ORTHO05D007598 5.7e-35 151.4 78 94.9
RcHm_v2.0_Chr4g0394651 Rosa chinensis HOM05D006230 ORTHO05D007598 6.3e-34 147.9 150 54.0
unitig_32.g10851 Utricularia gibba HOM05D006230 ORTHO05D007598 1.1e-33 147.1 132 62.9
Prupe.8G083300 Prunus persica HOM05D006230 ORTHO05D007598 5.5e-30 134.8 78 83.3
MD00G1118000 Malus domestica HOM05D006230 ORTHO05D007598 9.4e-30 134.0 75 82.7
Rhsim04G0174900 Rhododendron simsii HOM05D006230 ORTHO05D007598 1.6e-29 133.3 79 84.8
SEGI_13554 Sequoiadendron giganteum HOM05D006230 ORTHO05D007598 3.6e-29 132.1 124 58.9
AagrBONN_evm.TU.Sc2ySwM_228.3795 Anthoceros agrestis HOM05D006230 ORTHO05D007598 1.7e-26 123.2 119 55.5
Pp3c6_1140 Physcomitrium patens HOM05D006230 ORTHO05D007598 4.8e-26 121.7 118 57.6
Pp3c5_28500 Physcomitrium patens HOM05D006230 ORTHO05D007598 9.1e-25 117.5 119 56.3
Ah.04g155450 Amaranthus hybridus HOM05D000071 ORTHO05D007598 1.2e-24 117.1 120 55.8
Mapoly0087s0077 Marchantia polymorpha HOM05D006230 ORTHO05D007598 2.5e-22 109.4 137 48.9
Duzib052G0467 Durio zibethinus HOM05D006230 ORTHO05D007598 5.5e-22 108.2 102 61.8
SMO131G0001 Selaginella moellendorffii HOM05D006230 ORTHO05D007598 6.1e-21 104.8 75 64.0
CBR_g23072 Chara braunii HOM05D006230 ORTHO05D007598 3.0e-20 102.4 78 65.4
Cre06.g265800 Chlamydomonas reinhardtii HOM05D006230 ORTHO05D007598 3.1e-17 92.4 92 51.1
MCO07G061 Micromonas commoda HOM05D006230 ORTHO05D007598 2.9e-15 85.9 126 42.1
Nn3g19733 Nelumbo nucifera HOM05D006230 ORTHO05D007598 7.0e-09 64.7 36 91.7
VMungo0684G0001 Vigna mungo HOM05D006230 ORTHO05D007598 3.3e-06 55.8 65 44.6


User provided reference genes

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