Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 8.7e-96 354.0 173 100.0
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.6e-76 289.3 174 80.5
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 5.8e-76 288.1 174 79.9
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 1.7e-75 286.6 170 80.6
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 3.8e-75 285.4 174 79.9
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 1.4e-74 283.5 173 78.6
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 1.9e-74 283.1 170 80.6
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 4.2e-74 282.0 174 79.3
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 5.5e-74 281.6 171 79.5
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.7e-73 279.3 173 78.6
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 2.7e-73 279.3 173 76.3
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 1.0e-72 277.3 171 77.8
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 1.8e-72 276.6 169 79.3
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 5.1e-72 275.0 171 78.4
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 1.9e-71 273.1 171 76.0
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.9e-71 273.1 170 77.1
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 2.1e-70 269.6 169 78.1
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 2.1e-70 269.6 169 75.7
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 2.8e-70 269.2 169 78.1
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 8.2e-70 267.7 169 75.7
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 1.1e-69 267.3 168 77.4
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.4e-69 266.9 175 75.4
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 1.8e-69 266.5 171 74.3
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 4.1e-69 265.4 174 74.7
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 6.9e-69 264.6 168 76.2
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 6.9e-69 264.6 168 76.2
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 9.0e-69 264.2 167 76.6
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 9.0e-69 264.2 168 76.2
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 1.5e-68 263.5 167 76.0
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.6e-68 262.7 169 76.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 3.4e-68 262.3 161 78.3
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 4.5e-68 261.9 169 75.7
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.5e-68 261.9 172 77.3
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 4.5e-68 261.9 173 74.0
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 1.0e-67 260.8 169 75.1
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 2.2e-67 259.6 170 72.4
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 2.9e-67 259.2 170 77.6
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 3.8e-67 258.8 175 77.1
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 5.0e-67 258.5 169 74.0
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.4e-66 256.9 166 75.3
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 4.2e-66 255.4 168 73.2
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 5.5e-66 255.0 191 69.1
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 3.5e-65 252.3 172 70.3
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 1.3e-64 250.4 139 84.2
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 3.9e-64 248.8 171 70.2
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 2.5e-63 246.1 152 77.0
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 3.3e-63 245.7 175 70.3
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 5.7e-63 245.0 176 70.5
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 7.4e-63 244.6 164 70.7
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 7.4e-63 244.6 145 78.6
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 9.7e-63 244.2 176 69.9
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 9.7e-63 244.2 174 69.5
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 9.7e-63 244.2 167 68.3
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.3e-62 243.8 170 65.9
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 1.3e-62 243.8 157 74.5
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 2.8e-62 242.7 176 69.9
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 4.8e-62 241.9 177 67.8
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 6.3e-62 241.5 176 68.2
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 6.3e-62 241.5 164 70.1
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 8.2e-62 241.1 176 68.2
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 8.2e-62 241.1 137 79.6
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 1.4e-61 240.4 176 69.3
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 1.4e-61 240.4 176 69.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 1.4e-61 240.4 176 69.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 1.4e-61 240.4 176 69.3
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.4e-61 240.4 176 69.3
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 3.1e-61 239.2 176 67.6
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 4.1e-61 238.8 169 68.0
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 4.1e-61 238.8 176 68.8
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 4.1e-61 238.8 169 70.4
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 9.0e-61 237.7 174 66.1
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 1.5e-60 236.9 149 77.9
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 1.5e-60 236.9 167 67.7
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 3.4e-60 235.7 169 66.3
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 5.9e-60 235.0 173 67.1
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 6.5e-59 231.5 138 79.7
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 8.5e-59 231.1 151 76.8
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 4.2e-58 228.8 163 66.9
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 5.5e-58 228.4 163 66.3
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 1.6e-57 226.9 150 74.0
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.6e-57 226.9 147 73.5
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 6.1e-57 224.9 164 65.9
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 5.1e-56 221.9 162 66.0
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 5.1e-56 221.9 162 66.0
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.0e-55 219.9 162 65.4
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 4.3e-55 218.8 194 59.8
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 1.3e-54 217.2 136 72.8
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 4.8e-54 215.3 160 66.2
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 1.1e-53 214.2 178 60.7
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.4e-53 213.8 156 67.3
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 2.1e-49 199.9 152 66.4
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 1.2e-44 184.1 188 56.4
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 5.9e-44 181.8 113 72.6
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 8.5e-43 177.9 167 54.5
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.5e-42 176.4 149 59.1
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 9.4e-42 174.5 139 62.6
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.3e-38 164.1 145 59.3
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 1.7e-38 163.7 139 61.2
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.6e-33 147.1 148 50.0
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 1.8e-32 143.7 84 76.2
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.8e-29 133.7 162 46.9
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 1.8e-29 133.7 67 85.1
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 2.3e-24 116.7 84 64.3
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 9.8e-23 111.3 87 66.7
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.5e-18 97.4 86 59.3
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 2.8e-17 93.2 53 77.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.0e-16 91.3 63 65.1
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 6.8e-16 88.6 73 65.8
PGR004G0458 Punica granatum HOM05D007258 ORTHO05D008852 1.3e-14 84.3 76 67.1
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.7e-14 84.0 62 67.7
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.4e-13 80.1 62 61.3
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 2.0e-07 60.5 37 62.2
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 5.8e-07 58.9 81 34.6


User provided reference genes

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