Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1635 Punica granatum HOM05D003821 ORTHO05D004449 1.4e-19 99.4 84 100.0
Potri.010G025000 Populus trichocarpa HOM05D003821 ORTHO05D004449 9.2e-11 70.1 89 80.9
PGR031G0623 Punica granatum HOM05D003821 ORTHO05D004449 1.2e-10 69.7 83 79.5
Manes.01G217100 Manihot esculenta HOM05D003821 ORTHO05D004449 6.0e-10 67.4 82 81.7
Ciclev10023083m.g Citrus clementina HOM05D003821 ORTHO05D004449 7.8e-10 67.0 90 77.8
Prupe.1G136900 Prunus persica HOM05D003821 ORTHO05D004449 1.3e-09 66.2 87 78.2
Prupe.8G258100 Prunus persica HOM05D003821 ORTHO05D004449 1.7e-09 65.9 72 90.3
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 3.0e-09 65.1 83 57.8
Duzib138G0767 Durio zibethinus HOM05D003821 ORTHO05D004449 3.9e-09 64.7 82 76.8
Potri.014G131701 Populus trichocarpa HOM05D003821 ORTHO05D004449 3.9e-09 64.7 83 67.5
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 6.6e-09 63.9 81 65.4
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 8.7e-09 63.5 81 58.0
Migut.N00088 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.1e-08 63.2 87 78.2
TAR365G0642 Trochodendron aralioides HOM05D003821 ORTHO05D004449 1.1e-08 63.2 82 79.3
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.5e-08 62.8 81 46.9
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.5e-08 62.8 82 46.3
Lj5g0023739 Lotus japonicus HOM05D003821 ORTHO05D004449 1.5e-08 62.8 81 81.5
Potri.008G208100 Populus trichocarpa HOM05D003821 ORTHO05D004449 1.5e-08 62.8 78 84.6
Thecc.01G297100 Theobroma cacao HOM05D003821 ORTHO05D004449 1.5e-08 62.8 82 76.8
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 1.9e-08 62.4 84 48.8
THA.LOC104817510 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 1.9e-08 62.4 81 77.8
TWI14G0562 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.9e-08 62.4 82 80.5
Gohir.D12G011000 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.5e-08 62.0 82 76.8
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 3.3e-08 61.6 88 62.5
Manes.03G194900 Manihot esculenta HOM05D003821 ORTHO05D004449 3.3e-08 61.6 78 82.1
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 4.3e-08 61.2 81 43.2
Gohir.A12G010600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 4.3e-08 61.2 80 78.8
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 4.3e-08 61.2 82 43.9
THA.LOC104802574 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 5.6e-08 60.8 81 80.2
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 7.3e-08 60.5 74 47.3
Gorai.008G011000 Gossypium raimondii HOM05D003821 ORTHO05D004449 9.6e-08 60.1 81 76.5
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.6e-07 59.3 76 44.7
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.6e-07 59.3 76 44.7
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 1.6e-07 59.3 74 48.6
Duzib133G0834 Durio zibethinus HOM05D003821 ORTHO05D004449 1.6e-07 59.3 81 75.3
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 1.6e-07 59.3 87 47.1
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 2.1e-07 58.9 82 42.7
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 2.1e-07 58.9 75 45.3
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 2.8e-07 58.5 71 47.9
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 3.6e-07 58.2 90 57.8
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 4.7e-07 57.8 77 42.9
THA.LOC104820264 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 6.2e-07 57.4 75 66.7
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 8.1e-07 57.0 74 44.6
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.1e-06 56.6 74 44.6
Atru.chr5.1182 Acer truncatum HOM05D003821 ORTHO05D004449 1.4e-06 56.2 81 76.5
THA.LOC104821775 Tarenaya hassleriana HOM05D003821 ORTHO05D004449 1.4e-06 56.2 70 87.1
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 1.4e-06 56.2 82 51.2
CANSAT25G1361 Cannabis sativa HOM05D003821 ORTHO05D004449 1.8e-06 55.8 81 64.2
Haze_04896 Corylus avellana HOM05D003821 ORTHO05D004449 1.8e-06 55.8 100 38.0
Gohir.A08G117600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 1.8e-06 55.8 90 60.0
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 2.4e-06 55.5 71 45.1
GSVIVG01017758001 Vitis vinifera HOM05D003821 ORTHO05D004449 2.4e-06 55.5 31 90.3
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 3.1e-06 55.1 83 43.4
BcaB04g18333 Brassica carinata HOM05D003821 ORTHO05D004449 3.1e-06 55.1 80 43.8
Phvul.007G106500 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 4.0e-06 54.7 81 76.5
Gohir.A11G115200 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.2e-06 54.3 82 72.0
Gohir.D11G120200 Gossypium hirsutum HOM05D003821 ORTHO05D004449 5.2e-06 54.3 82 72.0
BolC7t45268H Brassica oleracea HOM05D003821 ORTHO05D004449 9.0e-06 53.5 80 42.5
BraA03t14035Z Brassica rapa HOM05D003821 ORTHO05D004449 9.0e-06 53.5 79 43.0
ClCG09G006050 Citrullus lanatus HOM05D003821 ORTHO05D004449 9.0e-06 53.5 81 40.7
Cc03_g01940 Coffea canephora HOM05D003821 ORTHO05D004449 9.0e-06 53.5 31 83.9
Gorai.007G128900 Gossypium raimondii HOM05D003821 ORTHO05D004449 9.0e-06 53.5 82 72.0


User provided reference genes

Program Settings