Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1529 Punica granatum HOM05D003171 ORTHO05D000921 3.2e-167 591.7 294 100.0
PGR083G0806 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-59 233.0 232 51.3
PGR142G1110 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-59 233.0 232 51.3
PGR142G2502 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-59 233.0 232 51.3
PGR119G1784 Punica granatum HOM05D003171 ORTHO05D000037 3.8e-59 232.6 228 54.8
PGR083G2390 Punica granatum HOM05D003171 ORTHO05D000921 6.4e-59 231.9 231 51.1
PGR031G3942 Punica granatum HOM05D003171 ORTHO05D000921 8.4e-59 231.5 225 51.6
PGR102G1426 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-58 230.3 232 50.9
PGR102G1332 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-58 229.9 232 50.9
PGR102G2917 Punica granatum HOM05D003171 ORTHO05D000921 4.2e-58 229.2 232 50.4
PGR102G0976 Punica granatum HOM05D003171 ORTHO05D000921 9.3e-58 228.0 228 54.8
PGR119G1897 Punica granatum HOM05D003171 ORTHO05D000921 9.3e-58 228.0 232 51.3
PGR042G1121 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-57 227.3 232 50.4
PGR083G2107 Punica granatum HOM05D003171 ORTHO05D000921 2.1e-57 226.9 232 50.0
PGR102G0211 Punica granatum HOM05D003171 ORTHO05D000921 3.5e-57 226.1 228 54.4
PGR042G0219 Punica granatum HOM05D003171 ORTHO05D000921 6.0e-57 225.3 232 51.7
PGR044G1317 Punica granatum HOM05D003171 ORTHO05D000921 7.9e-57 224.9 225 52.9
PGR102G1281 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-56 224.6 228 53.9
PGR142G3438 Punica granatum HOM05D003171 ORTHO05D000921 1.0e-56 224.6 232 50.9
PGR042G0470 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-56 224.2 232 50.9
PGR004G0383 Punica granatum HOM05D003171 ORTHO05D000921 1.8e-56 223.8 232 50.9
PGR004G1433 Punica granatum HOM05D003171 ORTHO05D000921 6.7e-56 221.9 231 51.1
PGR031G0230 Punica granatum HOM05D003171 ORTHO05D000921 6.7e-56 221.9 229 49.8
PGR044G0862 Punica granatum HOM05D003171 ORTHO05D000921 8.7e-56 221.5 232 50.9
PGR102G1953 Punica granatum HOM05D003171 ORTHO05D000921 8.7e-56 221.5 232 50.9
PGR004G0260 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-55 218.8 231 49.4
PGR031G0833 Punica granatum HOM05D003171 ORTHO05D000921 5.6e-55 218.8 232 50.0
PGR142G1171 Punica granatum HOM05D003171 ORTHO05D000921 7.4e-55 218.4 231 50.2
PGR042G0562 Punica granatum HOM05D003171 ORTHO05D000921 9.6e-55 218.0 231 50.2
PGR042G3316 Punica granatum HOM05D003171 ORTHO05D000921 2.8e-54 216.5 233 50.6
PGR142G2636 Punica granatum HOM05D003171 ORTHO05D000921 4.8e-54 215.7 231 48.9
PGR142G3043 Punica granatum HOM05D003171 ORTHO05D000921 8.1e-54 214.9 231 49.8
PGR031G2473 Punica granatum HOM05D003171 ORTHO05D000921 4.9e-51 205.7 216 50.5
PGR042G0711 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-50 204.5 228 46.5
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 2.4e-50 203.4 225 45.8
PGR119G2496 Punica granatum HOM05D003171 ORTHO05D000921 1.8e-48 197.2 232 44.8
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-47 193.4 227 43.6
PGR142G0886 Punica granatum HOM05D003171 ORTHO05D000921 4.3e-47 192.6 232 43.5
PGR044G2193 Punica granatum HOM05D003171 ORTHO05D000921 7.4e-47 191.8 215 47.4
PGR142G1768 Punica granatum HOM05D003171 ORTHO05D000921 1.3e-46 191.0 214 47.2
PGR119G0399 Punica granatum HOM05D003171 ORTHO05D000921 6.2e-46 188.7 181 54.1
PGR119G1352 Punica granatum HOM05D003171 ORTHO05D000921 2.9e-43 179.9 132 69.7
PGR102G2256 Punica granatum HOM05D003171 ORTHO05D000921 3.3e-39 166.4 190 46.8
PGR045G0004 Punica granatum HOM05D003171 ORTHO05D000921 6.3e-38 162.2 184 50.5
PGR031G1004 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-37 161.0 147 57.1
PGR142G2608 Punica granatum HOM05D003171 ORTHO05D000921 5.0e-35 152.5 169 52.1
PGR142G0920 Punica granatum HOM05D003171 ORTHO05D000921 1.4e-34 151.0 232 37.9
PGR004G1821 Punica granatum HOM05D003171 ORTHO05D000921 3.2e-34 149.8 160 57.5
PGR031G1247 Punica granatum HOM05D003171 ORTHO05D000921 5.5e-34 149.1 167 49.7
PGR119G0096 Punica granatum HOM05D003171 ORTHO05D000921 2.7e-33 146.7 231 37.7
PGR031G1431 Punica granatum HOM05D003171 ORTHO05D000921 1.9e-31 140.6 162 48.1
PGR083G2830 Punica granatum HOM05D003171 ORTHO05D000921 3.3e-31 139.8 159 45.9
PGR031G0788 Punica granatum HOM05D003171 ORTHO05D000921 9.7e-31 138.3 164 49.4
PGR031G3762 Punica granatum HOM05D003171 ORTHO05D000921 9.7e-31 138.3 154 50.6
PGR031G1123 Punica granatum HOM05D003171 ORTHO05D000921 1.6e-30 137.5 126 56.3
PGR004G1743 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-26 124.8 186 41.4
PGR042G2130 Punica granatum HOM05D003171 ORTHO05D000921 2.5e-26 123.6 164 42.7
PGR119G0556 Punica granatum HOM05D003171 ORTHO05D000921 2.3e-24 117.1 147 50.3
PGR031G3747 Punica granatum HOM05D003171 ORTHO05D000921 5.0e-19 99.4 129 41.1
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.9e-18 97.4 181 34.8
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 4.1e-13 79.7 164 31.1
Lsat_1_v5_gn_1_68500 Lactuca sativa HOM05D003171 ORTHO05D000921 1.6e-12 77.8 153 31.4
Oeu052247.2 Olea europaea HOM05D003171 ORTHO05D000921 1.6e-12 77.8 187 29.9
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 2.6e-12 77.0 152 30.9
Lj6g0011077 Lotus japonicus HOM05D003171 ORTHO05D000921 2.6e-12 77.0 164 30.5
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 3.5e-12 76.6 170 32.9
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 5.9e-12 75.9 203 25.6
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 7.7e-12 75.5 175 30.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.3e-11 74.7 215 24.2
Lsat_1_v5_gn_9_41001 Lactuca sativa HOM05D003171 ORTHO05D000921 2.2e-11 73.9 144 30.6
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 2.9e-11 73.6 154 29.9
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 6.5e-11 72.4 183 28.4
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 8.5e-11 72.0 146 30.1
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 1.5e-10 71.2 156 28.2
COL.COLO4_15868 Corchorus olitorius HOM05D003171 ORTHO05D000921 1.9e-10 70.9 164 28.0
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 2.5e-10 70.5 157 27.4
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 4.2e-10 69.7 154 30.5
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 4.2e-10 69.7 154 30.5
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.6e-09 67.8 164 29.3
CSS0041232 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.1e-09 67.4 132 33.3
Lsat_1_v5_gn_5_73681 Lactuca sativa HOM05D003171 ORTHO05D000921 6.1e-09 65.9 106 33.0
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 6.1e-09 65.9 133 32.3
PGR044G1109 Punica granatum HOM05D003171 ORTHO05D000921 6.1e-09 65.9 179 26.3
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 1.0e-08 65.1 163 29.4
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.4e-08 64.7 186 26.3
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 4.0e-08 63.2 157 24.2
QL07p023043 Quercus lobata HOM05D003171 ORTHO05D000921 5.2e-08 62.8 195 24.1
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 1.2e-07 61.6 133 30.8
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.0e-07 60.8 100 32.0
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 2.6e-07 60.5 188 26.6
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 7.5e-07 58.9 93 32.3
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.8e-06 57.0 225 23.1
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 3.7e-06 56.6 87 34.5
CSS0009593 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 6.3e-06 55.8 109 33.9


User provided reference genes

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