Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 5.1e-111 404.4 207 100.0
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 2.0e-70 269.6 214 70.1
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 2.8e-69 265.8 208 67.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 1.2e-67 260.4 207 66.7
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 1.2e-67 260.4 207 68.1
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 7.7e-67 257.7 209 67.9
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 1.3e-66 256.9 205 67.3
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 2.5e-65 252.7 210 66.2
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 3.2e-65 252.3 208 67.8
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 7.2e-65 251.1 208 63.9
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.6e-64 250.0 209 68.4
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 2.1e-64 249.6 209 67.5
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 2.1e-64 249.6 209 67.5
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 6.1e-64 248.1 213 64.3
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.0e-63 247.3 207 66.2
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 1.4e-63 246.9 210 63.8
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.8e-63 246.5 209 64.1
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 5.2e-63 245.0 206 65.0
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 1.5e-62 243.4 208 63.9
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 1.5e-62 243.4 215 62.3
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 7.5e-62 241.1 207 65.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 1.7e-61 240.0 209 65.6
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.7e-61 240.0 207 66.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 2.2e-61 239.6 207 62.8
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 4.8e-61 238.4 213 62.9
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 3.1e-60 235.7 208 63.5
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 4.1e-60 235.3 214 62.1
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 7.0e-60 234.6 207 63.3
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-59 233.4 208 61.5
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 1.6e-59 233.4 208 61.5
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 1.6e-59 233.4 203 64.5
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 1.6e-59 233.4 205 61.5
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.0e-59 233.0 202 64.9
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 3.5e-59 232.3 206 63.6
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 5.9e-59 231.5 207 61.8
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 2.9e-58 229.2 210 62.9
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 1.1e-57 227.3 211 61.1
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.5e-57 226.9 210 60.5
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 3.2e-57 225.7 204 59.3
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 4.2e-57 225.3 208 62.0
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 9.4e-57 224.2 208 60.1
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 9.4e-57 224.2 207 60.4
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 2.1e-56 223.0 205 61.5
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 2.7e-56 222.6 208 60.1
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.6e-56 222.2 213 60.1
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 4.7e-56 221.9 213 60.1
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 8.0e-56 221.1 212 58.5
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.0e-55 220.7 210 57.1
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 1.0e-55 220.7 206 60.2
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.0e-55 220.7 210 61.0
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 1.4e-55 220.3 155 72.9
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.4e-55 220.3 210 60.5
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 1.8e-55 219.9 204 60.8
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 2.3e-55 219.5 214 58.9
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 5.2e-55 218.4 209 57.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 5.2e-55 218.4 209 60.3
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 8.8e-55 217.6 209 60.3
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 1.2e-54 217.2 210 56.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 1.2e-54 217.2 211 60.2
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 1.5e-54 216.9 185 63.8
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 1.5e-54 216.9 207 58.9
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 2.2e-53 213.0 210 56.7
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 2.8e-53 212.6 217 55.3
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 3.7e-53 212.2 157 66.9
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 4.8e-53 211.8 199 60.3
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 1.1e-52 210.7 178 62.9
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.8e-52 209.9 218 56.9
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 3.1e-52 209.1 209 57.4
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 3.1e-52 209.1 216 56.0
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 3.1e-52 209.1 216 56.0
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 3.1e-52 209.1 216 56.0
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 3.1e-52 209.1 208 57.7
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.1e-52 209.1 145 73.8
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 4.1e-52 208.8 203 57.1
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 9.1e-52 207.6 202 58.9
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 1.2e-51 207.2 155 71.0
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 1.2e-51 207.2 189 59.8
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 2.0e-51 206.5 217 54.8
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 2.0e-51 206.5 202 58.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 2.7e-51 206.1 200 60.5
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 3.5e-51 205.7 188 58.5
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 7.7e-51 204.5 218 54.6
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 1.0e-50 204.1 218 51.8
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 1.7e-50 203.4 210 54.3
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.3e-50 203.0 211 55.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.3e-50 203.0 217 54.4
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 2.5e-49 199.5 202 57.4
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.6e-48 195.7 207 50.2
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.6e-48 195.7 207 50.2
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.5e-46 190.3 207 50.2
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 9.8e-46 187.6 217 51.6
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 1.3e-45 187.2 179 58.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 6.3e-45 184.9 210 49.5
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 1.1e-44 184.1 223 51.1
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 5.4e-44 181.8 214 47.7
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 1.7e-42 176.8 147 59.9
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.6e-42 174.9 220 45.9
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.1e-41 174.1 221 46.2
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.5e-41 173.7 210 48.6
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 3.3e-41 172.6 155 55.5
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 6.4e-37 158.3 156 51.3
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 1.8e-31 140.2 211 40.8
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 3.2e-28 129.4 92 65.2
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 1.9e-25 120.2 174 44.3
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.1e-23 114.4 117 50.4
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 3.0e-18 96.3 152 35.5
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.1e-15 87.8 127 48.0
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 2.4e-15 86.7 148 33.8
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 2.4e-15 86.7 123 47.2
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 3.1e-15 86.3 144 31.2
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 8.9e-15 84.7 143 30.8
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 1.7e-13 80.5 178 31.5
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 8.4e-13 78.2 74 52.7
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.2e-12 76.3 141 34.0
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 2.1e-11 73.6 141 33.3
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.0e-10 71.2 71 54.9


User provided reference genes

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