Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 4.8e-205 717.6 364 100.0
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 4.7e-152 541.6 364 73.6
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 8.9e-151 537.3 364 73.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.5e-150 536.6 364 72.5
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.2e-149 532.7 361 73.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 8.3e-149 530.8 360 72.5
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.4e-148 529.3 364 72.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 4.1e-148 528.5 364 71.7
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 7.0e-148 527.7 364 71.4
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.2e-147 526.9 364 71.4
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 2.0e-147 526.2 361 71.5
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.3e-146 523.5 364 72.5
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.7e-146 523.1 364 70.6
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.3e-145 518.8 364 70.9
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 5.6e-145 518.1 361 71.2
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.8e-144 515.8 363 70.2
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.6e-144 515.4 361 70.6
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.4e-143 513.5 364 68.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.1e-143 512.3 367 69.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 4.0e-143 511.9 364 70.3
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 8.9e-143 510.8 361 69.5
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 8.9e-143 510.8 354 69.8
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.2e-142 510.4 364 68.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 1.5e-142 510.0 366 68.9
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.4e-142 508.8 364 69.5
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.8e-142 508.1 368 69.0
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.8e-142 508.1 368 69.0
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 7.5e-142 507.7 356 70.5
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 7.5e-142 507.7 364 69.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.3e-141 506.9 366 68.3
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.7e-141 506.5 366 69.1
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 8.3e-141 504.2 358 69.8
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.4e-140 502.7 361 70.4
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.2e-140 502.3 364 69.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 5.4e-140 501.5 323 76.5
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.0e-140 501.1 367 69.8
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 7.0e-140 501.1 356 68.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.2e-139 500.4 364 68.7
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 1.2e-139 500.4 363 67.2
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.7e-139 499.2 361 68.1
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.5e-139 498.8 362 68.2
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 3.5e-139 498.8 365 69.0
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-138 497.3 368 69.0
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.3e-138 496.9 368 67.9
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.3e-138 496.9 367 68.4
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.7e-138 496.5 368 69.0
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 3.0e-138 495.7 354 67.8
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 2.5e-137 492.7 360 68.3
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.5e-137 492.7 366 68.3
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 3.3e-137 492.3 360 67.5
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 3.3e-137 492.3 358 68.2
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 4.3e-137 491.9 360 68.3
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.3e-137 491.9 367 67.6
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 7.3e-137 491.1 364 67.0
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 7.3e-137 491.1 364 67.6
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.2e-136 490.3 358 67.0
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.2e-136 490.3 348 70.4
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.8e-136 489.2 358 67.6
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.7e-136 488.4 364 65.7
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 4.7e-136 488.4 360 67.8
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 2.3e-135 486.1 360 66.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 4.0e-135 485.3 383 65.0
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 5.2e-135 485.0 358 67.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 5.2e-135 485.0 358 67.0
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 6.8e-135 484.6 358 67.3
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 6.8e-135 484.6 346 68.8
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 8.9e-135 484.2 378 65.3
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.0e-134 483.0 372 65.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.4e-134 482.3 351 67.2
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 3.4e-134 482.3 362 65.2
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 4.4e-134 481.9 362 67.7
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 7.5e-134 481.1 355 66.5
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.9e-133 479.2 358 67.0
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 4.9e-133 478.4 361 66.5
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.3e-133 477.6 364 67.6
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 8.3e-133 477.6 335 69.6
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 2.4e-132 476.1 367 65.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 4.1e-132 475.3 364 65.1
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 7.0e-132 474.6 354 65.5
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 4.6e-131 471.9 338 70.4
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.8e-131 471.1 361 65.9
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 2.3e-130 469.5 367 64.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.0e-130 469.2 440 57.7
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.0e-130 469.2 361 65.7
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.3e-129 465.7 339 68.1
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 7.3e-129 464.5 362 63.0
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 2.1e-128 463.0 370 64.1
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 4.7e-128 461.8 363 65.0
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.7e-128 461.8 367 64.3
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.5e-126 456.8 366 63.4
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.2e-125 453.0 330 67.9
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.1e-124 450.7 362 61.0
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 1.4e-124 450.3 339 66.4
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.4e-124 449.5 318 70.1
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 7.1e-124 448.0 365 60.5
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.0e-122 444.1 407 58.5
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.0e-122 442.6 425 56.7
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 2.8e-120 436.0 354 61.9
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.1e-119 434.1 287 74.6
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 3.2e-116 422.5 311 67.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 4.2e-116 422.2 289 72.3
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 2.8e-112 409.5 284 72.2
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.4e-110 402.5 275 72.0
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 3.9e-106 389.0 274 70.8
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 4.8e-104 382.1 365 55.1
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 6.2e-104 381.7 351 57.0
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 9.0e-103 377.9 316 61.4
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 9.3e-100 367.9 304 64.8
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.3e-96 357.5 330 58.5
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 3.1e-95 352.8 354 51.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 6.0e-91 338.6 259 65.3
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.1e-89 334.3 268 64.6
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.8e-87 327.0 268 61.9
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 6.1e-83 312.0 312 50.6
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 2.5e-81 306.6 352 46.9
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.7e-72 277.3 451 37.0
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-65 252.7 361 44.0
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 3.7e-56 223.0 354 39.0
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.2e-53 213.8 361 37.1
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-52 209.1 177 64.4
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 8.8e-50 201.8 271 45.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.5e-45 185.3 240 47.5
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-42 177.9 210 51.4
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.7e-41 172.6 180 55.6
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.3e-40 168.7 180 54.4
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 2.7e-38 163.7 244 43.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 3.3e-36 156.8 113 67.3
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.3e-24 118.2 128 53.9
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 3.0e-21 107.1 204 38.2
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 2.4e-15 87.4 68 60.3
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 2.1e-14 84.3 68 58.8
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.8e-14 82.4 49 79.6
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 3.6e-11 73.6 165 28.5
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.4e-07 61.6 88 38.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 4.1e-07 60.1 35 82.9


User provided reference genes

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