Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 2.5e-161 572.0 278 100.0
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.6e-83 313.5 261 62.5
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 5.3e-79 298.5 267 58.4
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 5.3e-79 298.5 266 57.5
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 4.5e-78 295.4 267 56.6
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 3.8e-77 292.4 267 57.7
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.9e-76 290.0 267 56.6
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 2.5e-76 289.7 264 54.5
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 2.5e-76 289.7 267 56.6
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 4.2e-76 288.9 263 55.1
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 5.5e-76 288.5 264 56.4
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 2.1e-75 286.6 258 53.9
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 3.5e-75 285.8 258 57.0
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.8e-74 283.5 258 56.2
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.1e-73 280.8 251 56.2
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.1e-73 280.8 256 52.3
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 2.5e-73 279.6 259 52.1
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 4.3e-73 278.9 264 55.3
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 2.8e-72 276.2 263 51.7
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 1.4e-71 273.9 259 52.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.8e-71 273.5 257 52.1
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 1.8e-71 273.5 251 55.4
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 5.3e-71 271.9 255 53.3
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 1.2e-70 270.8 251 55.4
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.5e-70 270.4 264 52.7
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 1.5e-70 270.4 267 50.9
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.0e-70 270.0 256 53.5
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 3.4e-70 269.2 241 56.0
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 4.5e-70 268.9 256 51.2
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.0e-69 267.7 262 53.8
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 8.5e-69 264.6 264 50.8
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 1.4e-68 263.8 264 51.1
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 4.2e-68 262.3 261 51.7
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.7e-67 259.6 260 49.6
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 4.6e-67 258.8 256 50.0
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 4.6e-67 258.8 256 50.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 6.1e-67 258.5 255 50.2
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 6.1e-67 258.5 265 50.2
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 7.9e-67 258.1 256 50.0
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.4e-66 257.3 259 52.5
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.8e-66 256.9 257 51.8
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 1.8e-66 256.9 236 55.9
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 2.3e-66 256.5 254 52.4
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 3.9e-66 255.8 262 50.4
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 5.1e-66 255.4 255 50.2
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 6.7e-66 255.0 267 50.6
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.5e-65 253.8 257 52.9
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 2.5e-65 253.1 252 50.0
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.5e-65 253.1 260 48.8
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.5e-65 253.1 257 49.4
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 3.3e-65 252.7 257 51.4
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 4.3e-65 252.3 259 51.7
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 7.4e-65 251.5 256 49.2
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.7e-64 250.4 266 50.0
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 2.2e-64 250.0 257 50.2
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 4.8e-64 248.8 258 50.0
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.2e-62 244.2 255 49.8
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 2.0e-62 243.4 256 51.6
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 3.8e-61 239.2 257 48.2
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 3.2e-60 236.1 241 48.5
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 2.1e-59 233.4 255 46.3
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.0e-58 231.1 239 48.5
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.3e-58 229.9 247 45.7
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 6.7e-58 228.4 266 44.7
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.5e-57 227.3 247 45.7
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.4e-57 225.7 247 47.8
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 5.7e-57 225.3 251 46.2
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 7.4e-57 224.9 260 46.5
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.3e-56 224.2 251 47.0
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 3.7e-56 222.6 259 44.0
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 4.8e-56 222.2 263 46.8
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.2e-54 217.6 182 57.7
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 2.0e-54 216.9 252 48.4
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.7e-53 213.8 251 45.4
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 5.0e-53 212.2 245 46.9
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 6.5e-53 211.8 244 47.1
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 1.1e-52 211.1 244 47.1
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.1e-52 211.1 244 47.5
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 2.5e-52 209.9 243 46.9
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.2e-52 209.5 244 46.7
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.2e-52 209.5 244 46.7
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 3.2e-52 209.5 259 41.7
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 9.4e-52 208.0 244 45.9
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 2.7e-51 206.5 262 45.0
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 6.1e-51 205.3 261 42.9
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.0e-50 204.5 242 43.8
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 1.0e-50 204.5 160 59.4
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 1.5e-49 200.7 247 43.7
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 7.4e-49 198.4 236 45.8
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.2e-48 196.8 171 52.6
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 6.3e-48 195.3 245 43.3
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 3.1e-47 193.0 247 40.1
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 5.3e-47 192.2 215 49.3
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 2.2e-45 186.8 173 56.6
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.2e-45 186.8 250 42.8
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 8.5e-45 184.9 174 53.4
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 3.2e-44 183.0 252 43.3
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 2.6e-41 173.3 310 33.9
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.6e-38 164.1 322 32.6
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 5.5e-36 155.6 258 36.8
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.6e-35 154.1 158 48.1
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 2.1e-35 153.7 265 34.7
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 5.7e-33 145.6 151 51.7
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 8.3e-32 141.7 151 51.0
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 2.9e-29 133.3 151 46.4
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 6.6e-29 132.1 234 30.8
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 1.1e-28 131.3 90 70.0
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 2.3e-26 123.6 148 41.2
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 5.7e-25 119.0 103 58.3
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 3.5e-22 109.8 361 24.9
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 3.5e-22 109.8 143 42.7
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.3e-21 107.8 160 41.2
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.1e-20 104.8 82 53.7
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 4.3e-20 102.8 125 47.2
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 9.5e-20 101.7 113 49.6
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 2.1e-19 100.5 79 54.4
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.3e-18 97.1 70 64.3
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 1.2e-17 94.7 63 65.1
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 5.8e-17 92.4 83 51.8
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 5.8e-17 92.4 122 39.3
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 6.0e-14 82.4 70 57.1


User provided reference genes

Program Settings