Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 7.1e-101 370.5 181 100.0
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 2.1e-36 156.4 180 45.0
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.2e-34 150.6 182 44.5
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 5.8e-34 148.3 174 42.5
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 1.4e-32 143.7 171 46.8
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.9e-32 143.3 162 44.4
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 2.4e-32 142.9 153 45.8
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 7.0e-32 141.4 164 47.6
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 2.7e-31 139.4 172 41.3
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 7.8e-31 137.9 171 46.8
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.3e-30 137.1 170 44.7
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 2.3e-30 136.3 145 42.8
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 6.6e-30 134.8 147 45.6
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 8.6e-30 134.4 126 50.8
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 1.1e-29 134.0 177 42.9
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.1e-29 134.0 148 45.3
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.9e-29 133.3 186 40.9
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 7.3e-29 131.3 126 50.0
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.2e-28 130.6 149 46.3
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.6e-28 130.2 149 46.3
MELO3C004168.2 Cucumis melo HOM05D008339 ORTHO05D009712 8.0e-28 127.9 149 45.6
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 1.4e-27 127.1 149 47.0
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.4e-27 127.1 177 39.0
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 4.0e-27 125.6 178 36.5
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 5.2e-27 125.2 149 47.0
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.2e-26 124.0 149 43.6
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.5e-26 123.6 149 44.3
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 3.4e-26 122.5 134 43.3
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 4.4e-26 122.1 159 41.5
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-23 113.2 153 38.6
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.7e-23 112.8 153 38.6
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 3.5e-23 112.5 166 38.6
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.0e-22 110.9 163 37.4
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 1.0e-22 110.9 184 37.0
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.0e-22 110.9 184 37.0
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 3.9e-22 109.0 143 42.7
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 3.9e-22 109.0 165 36.4
Sed0011112 Sechium edule HOM05D008339 ORTHO05D009712 7.3e-21 104.8 150 38.0
MELO3C031306.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.7e-20 102.1 135 40.7
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.1e-19 100.9 159 35.2
MELO3C031307.2 Cucumis melo HOM05D008339 ORTHO05D009712 1.8e-19 100.1 135 39.3
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 8.9e-19 97.8 159 32.7
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 1.5e-18 97.1 182 36.8
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.5e-18 97.1 182 36.8
MELO3C004157.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.0e-18 96.7 135 42.2
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.0e-18 96.7 169 30.2
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 2.6e-18 96.3 179 32.4
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 2.2e-17 93.2 164 29.3
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 2.9e-17 92.8 164 27.4
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 3.7e-17 92.4 150 33.3
MELO3C031308.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.9e-17 92.0 130 37.7
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 1.9e-16 90.1 164 26.8
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 2.4e-16 89.7 179 31.3
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 7.1e-16 88.2 161 26.7
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 2.7e-15 86.3 148 28.4
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 4.6e-15 85.5 156 30.1
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 4.6e-15 85.5 167 26.3
Prupe.1G205300 Prunus persica HOM05D008339 ORTHO05D009712 4.6e-15 85.5 94 46.8
Carub.0001s0870 Capsella rubella HOM05D013394 ORTHO05D009712 6.0e-15 85.1 172 29.7
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 7.8e-15 84.7 156 26.9
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 7.8e-15 84.7 167 25.1
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 7.8e-15 84.7 169 26.0
Sabra11G0113000 Salix brachista HOM05D008339 ORTHO05D009712 1.0e-14 84.3 98 40.8
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.9e-13 80.1 156 28.2
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 4.3e-13 79.0 172 28.5
MELO3C031309.2 Cucumis melo HOM05D008339 ORTHO05D009712 8.1e-12 74.7 93 40.9
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.4e-11 73.9 164 28.0
MELO3C031523.2 Cucumis melo HOM05D008339 ORTHO05D009712 2.4e-11 73.2 96 40.6
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 2.4e-11 73.2 172 30.2
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 8.9e-11 71.2 145 28.3
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 8.9e-11 71.2 167 24.6
Sp5g12740 Schrenkiella parvula HOM05D009945 ORTHO05D012028 1.5e-10 70.5 174 27.6
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 1.5e-10 70.5 151 32.5
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 2.0e-10 70.1 145 27.6
BcaB01g00725 Brassica carinata HOM05D009945 ORTHO05D012028 2.6e-10 69.7 159 27.7
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.6e-10 69.7 170 26.5
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.6e-10 69.7 166 25.3
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.4e-10 69.3 161 28.0
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.4e-10 68.9 141 27.7
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 4.4e-10 68.9 166 25.9
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 9.9e-10 67.8 176 27.8
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 1.3e-09 67.4 166 24.7
TAR627G0317 Trochodendron aralioides HOM05D008403 ORTHO05D010317 1.7e-09 67.0 150 25.3
BcaC07g39401 Brassica carinata HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
BcaC07g39575 Brassica carinata HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
C08p24330 Brassica napus HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
C08p26270 Brassica napus HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
BolC8t50051H Brassica oleracea HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
BolC8t50245H Brassica oleracea HOM05D009945 ORTHO05D012028 2.9e-09 66.2 174 26.4
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 2.9e-09 66.2 160 26.9
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.9e-09 66.2 168 30.4
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.9e-09 65.5 170 25.3
A06p18400 Brassica napus HOM05D009945 ORTHO05D012028 6.4e-09 65.1 174 25.9
BraA06t24921Z Brassica rapa HOM05D009945 ORTHO05D012028 6.4e-09 65.1 174 25.9
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 6.4e-09 65.1 172 26.2
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 6.4e-09 65.1 149 26.2
TAR636G1790 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.1e-08 64.3 151 27.8
CARHR158270 Cardamine hirsuta HOM05D009945 ORTHO05D012028 1.4e-08 63.9 159 26.4
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 1.4e-08 63.9 167 26.3
TAR636G0184 Trochodendron aralioides HOM05D004113 ORTHO05D005233 1.4e-08 63.9 176 26.7
TAR633G1553 Trochodendron aralioides HOM05D012615 ORTHO05D010044 2.4e-08 63.2 146 26.7
MELO3C004164.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.2e-08 62.4 160 28.8
FAN05G4801 Fragaria x ananassa HOM05D008339 ORTHO05D009712 5.4e-08 62.0 101 33.7
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 1.2e-07 60.8 104 36.5
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 2.1e-07 60.1 127 30.7
TAR636G3366 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.7e-07 59.7 177 24.3
AL5G29080 Arabidopsis lyrata HOM05D009945 ORTHO05D012028 3.5e-07 59.3 159 25.2
AT3G49330 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 3.5e-07 59.3 159 25.2
Solyc04g015510.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 4.6e-07 58.9 172 25.6
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 4.6e-07 58.9 177 24.9
TAR633G1609 Trochodendron aralioides HOM05D004113 ORTHO05D005233 7.8e-07 58.2 176 24.4
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 1.0e-06 57.8 181 22.1
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 3.0e-06 56.2 175 27.4
TAR627G1144 Trochodendron aralioides HOM05D000317 ORTHO05D000032 3.9e-06 55.8 142 27.5
Sed0015156 Sechium edule HOM05D011459 ORTHO05D013640 6.6e-06 55.1 132 31.1


User provided reference genes

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