Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G1018 Punica granatum HOM05D006133 ORTHO05D007855 3.3e-65 252.3 213 100.0
Dinv40551 Davidia involucrata HOM05D006133 ORTHO05D007855 2.3e-42 176.4 213 53.5
QL05p040164 Quercus lobata HOM05D006133 ORTHO05D007855 2.0e-41 173.3 213 53.5
Actinidia05630 Actinidia chinensis HOM05D006133 ORTHO05D007855 9.8e-41 171.0 214 57.5
Manes.16G026900 Manihot esculenta HOM05D006133 ORTHO05D007855 1.1e-39 167.5 214 51.9
Cc02_g13300 Coffea canephora HOM05D006133 ORTHO05D007855 1.4e-39 167.2 214 51.9
TWI38G1277 Tripterygium wilfordii HOM05D006133 ORTHO05D007855 5.4e-39 165.2 213 52.6
CiPaw.09G059200 Carya illinoinensis HOM05D006133 ORTHO05D007855 7.0e-39 164.9 214 51.4
arahy.Tifrunner.gnm1.ann1.Y5A5WX Arachis hypogaea HOM05D006133 ORTHO05D007855 1.2e-38 164.1 215 55.8
Hund23731 Selenicereus undatus HOM05D006133 ORTHO05D007855 2.0e-38 163.3 215 50.7
Atru.chr10.1894 Acer truncatum HOM05D006133 ORTHO05D007855 2.7e-38 162.9 214 51.9
Thecc.06G188500 Theobroma cacao HOM05D006133 ORTHO05D007855 2.7e-38 162.9 214 51.4
HanXRQChr16g0517711 Helianthus annuus HOM05D006133 ORTHO05D007855 4.5e-38 162.2 190 63.7
Potri.011G051900 Populus trichocarpa HOM05D006133 ORTHO05D007855 7.7e-38 161.4 214 67.3
Migut.M01145 Erythranthe guttata HOM05D006133 ORTHO05D007855 1.0e-37 161.0 215 51.6
Hund23730 Selenicereus undatus HOM05D006133 ORTHO05D007855 1.0e-37 161.0 215 50.2
Haze_06477 Corylus avellana HOM05D006133 ORTHO05D007855 1.7e-37 160.2 214 50.0
Lj1A1206T67 Lonicera japonica HOM05D006133 ORTHO05D007855 2.9e-37 159.5 214 50.5
COL.COLO4_31481 Corchorus olitorius HOM05D006133 ORTHO05D007855 5.0e-37 158.7 212 50.0
CSS0047692 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 8.5e-37 157.9 214 50.5
Potri.004G042800 Populus trichocarpa HOM05D006133 ORTHO05D007855 8.5e-37 157.9 214 50.9
Glyma.07G196100 Glycine max HOM05D006133 ORTHO05D007855 1.5e-36 157.1 219 51.1
Gorai.011G027600 Gossypium raimondii HOM05D006133 ORTHO05D007855 1.9e-36 156.8 215 49.8
Glyma.13G179800 Glycine max HOM05D006133 ORTHO05D007855 2.5e-36 156.4 218 50.5
Gohir.A10G025600 Gossypium hirsutum HOM05D006133 ORTHO05D007855 2.5e-36 156.4 215 49.8
Cpa.g.sc27.45 Carica papaya HOM05D006133 ORTHO05D007855 3.2e-36 156.0 210 50.0
MBI09_g12165_MAGBIO Magnolia biondii HOM05D006133 ORTHO05D007855 5.5e-36 155.2 213 50.2
arahy.Tifrunner.gnm1.ann1.YAJ938 Arachis hypogaea HOM05D006133 ORTHO05D007855 9.4e-36 154.5 227 48.5
Cfa000437 Carpinus fangiana HOM05D006133 ORTHO05D007855 9.4e-36 154.5 215 49.8
Hma1.2p1_0785F.1_g217580 Hydrangea macrophylla HOM05D006133 ORTHO05D007855 9.4e-36 154.5 223 49.3
Sabra11G0035700 Salix brachista HOM05D006133 ORTHO05D007855 9.4e-36 154.5 214 76.2
ECA234G2723 Erigeron canadensis HOM05D006133 ORTHO05D007855 2.7e-35 152.9 192 50.5
Lsat_1_v5_gn_4_52940 Lactuca sativa HOM05D006133 ORTHO05D007855 3.6e-35 152.5 190 58.9
Lj4g0021405 Lotus japonicus HOM05D006133 ORTHO05D007855 4.7e-35 152.1 220 49.5
Nitab4.5_0003432g0010 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.8e-34 150.2 215 47.0
Nitab4.5_0007940g0050 Nicotiana tabacum HOM05D006133 ORTHO05D007855 1.8e-34 150.2 215 47.0
Medtr4g088855 Medicago truncatula HOM05D006133 ORTHO05D007855 2.3e-34 149.8 214 49.1
CAN.G1164.26 Capsicum annuum HOM05D006133 ORTHO05D007855 3.0e-34 149.4 214 55.1
Oeu057904.1 Olea europaea HOM05D006133 ORTHO05D007855 4.0e-34 149.1 214 50.0
Sopen02g023140 Solanum pennellii HOM05D006133 ORTHO05D007855 4.0e-34 149.1 214 54.7
PGSC0003DMG400029689 Solanum tuberosum HOM05D006133 ORTHO05D007855 5.2e-34 148.7 214 56.1
TAR628G0719 Trochodendron aralioides HOM05D006133 ORTHO05D007855 5.2e-34 148.7 214 49.5
CSS0042278 Camellia sinensis var. sinensis HOM05D006133 ORTHO05D007855 6.8e-34 148.3 214 54.2
Prupe.4G046300 Prunus persica HOM05D006133 ORTHO05D007855 8.8e-34 147.9 215 48.8
AUR62017011 Chenopodium quinoa HOM05D006133 ORTHO05D007855 1.2e-33 147.5 217 47.0
Phvul.002G234200 Phaseolus vulgaris HOM05D006133 ORTHO05D007855 1.2e-33 147.5 218 48.2
AUR62014816 Chenopodium quinoa HOM05D006133 ORTHO05D007855 4.4e-33 145.6 217 47.0
Sc05g0007700 Simmondsia chinensis HOM05D006133 ORTHO05D007855 4.4e-33 145.6 214 46.3
TPR.G12027 Trifolium pratense HOM05D006133 ORTHO05D007855 2.2e-32 143.3 214 48.1
Peaxi162Scf00736g00427 Petunia axillaris HOM05D006133 ORTHO05D007855 3.7e-32 142.5 225 43.1
RcHm_v2.0_Chr5g0008281 Rosa chinensis HOM05D006133 ORTHO05D007855 3.7e-32 142.5 209 50.7
FvH4_3g09320 Fragaria vesca HOM05D006133 ORTHO05D007855 4.9e-32 142.1 215 49.8
VMungo0251G0712 Vigna mungo HOM05D006133 ORTHO05D007855 4.1e-31 139.0 218 46.3
CANSAT35G1333 Cannabis sativa HOM05D006133 ORTHO05D007855 5.4e-31 138.7 175 77.1
Cc01_g03530 Coffea canephora HOM05D006133 ORTHO05D007855 9.2e-31 137.9 169 51.5
ClCG03G006010 Citrullus lanatus HOM05D006133 ORTHO05D007855 1.6e-30 137.1 177 49.7
CARHR127900 Cardamine hirsuta HOM05D006133 ORTHO05D007855 2.0e-30 136.7 215 45.1
PSO478G5317 Papaver somniferum HOM05D006133 ORTHO05D007855 2.0e-30 136.7 209 44.0
Ca_18541_v3 Cicer arietinum L. HOM05D006133 ORTHO05D007855 7.7e-30 134.8 174 50.6
AL4G29540 Arabidopsis lyrata HOM05D006133 ORTHO05D007855 1.0e-29 134.4 206 48.5
THA.LOC104814218 Tarenaya hassleriana HOM05D006133 ORTHO05D007855 1.7e-29 133.7 213 44.6
MELO3C002599.2 Cucumis melo HOM05D006133 ORTHO05D007855 2.3e-29 133.3 177 48.6
Carub.0004s1546 Capsella rubella HOM05D006133 ORTHO05D007855 2.9e-29 132.9 213 43.7
Nn1g08778 Nelumbo nucifera HOM05D006133 ORTHO05D007855 2.9e-29 132.9 213 44.6
PSO478G1675 Papaver somniferum HOM05D006133 ORTHO05D007855 3.8e-29 132.5 209 43.1
FAN16G1924 Fragaria x ananassa HOM05D006133 ORTHO05D007855 5.0e-29 132.1 220 47.3
SGA_v2.0_scaffold22G09717 Striga asiatica HOM05D006133 ORTHO05D007855 5.0e-29 132.1 218 62.8
unitig_22.g6229 Utricularia gibba HOM05D006133 ORTHO05D007855 6.6e-29 131.7 182 49.5
Dinv07556 Davidia involucrata HOM05D006133 ORTHO05D007855 1.5e-28 130.6 118 68.6
Duzib235G0895 Durio zibethinus HOM05D006133 ORTHO05D007855 1.9e-28 130.2 169 49.1
Sp4g16180 Schrenkiella parvula HOM05D006133 ORTHO05D007855 1.9e-28 130.2 214 54.7
MD05G1313300 Malus domestica HOM05D006133 ORTHO05D007855 3.3e-28 129.4 118 70.3
CsaV3_1G012270 Cucumis sativus L. HOM05D006133 ORTHO05D007855 4.3e-28 129.0 211 44.1
Lalb_Chr05g0218461 Lupinus albus HOM05D006133 ORTHO05D007855 7.3e-28 128.3 196 76.0
GSVIVG01033625001 Vitis vinifera HOM05D006133 ORTHO05D007855 1.6e-27 127.1 169 82.8
ATR0584G083 Amborella trichopoda HOM05D006133 ORTHO05D007855 3.6e-27 125.9 204 43.6
Gohir.D10G026300 Gossypium hirsutum HOM05D006133 ORTHO05D007855 6.1e-27 125.2 117 65.8
Solyc02g078280.3 Solanum lycopersicum HOM05D006133 ORTHO05D007855 6.1e-27 125.2 170 58.2
Ah.09g237330 Amaranthus hybridus HOM05D006133 ORTHO05D007855 8.0e-27 124.8 227 41.9
Solyc02g078290.4 Solanum lycopersicum HOM05D006133 ORTHO05D007855 1.4e-26 124.0 117 63.2
BcaC02g07769 Brassica carinata HOM05D006133 ORTHO05D007855 1.8e-26 123.6 213 41.3
BolC4t27810H Brassica oleracea HOM05D006133 ORTHO05D007855 1.8e-26 123.6 214 41.6
Sed0025328 Sechium edule HOM05D006133 ORTHO05D007855 3.4e-25 119.4 118 64.4
AT2G33793 Arabidopsis thaliana HOM05D006133 ORTHO05D007855 1.3e-24 117.5 206 41.3
Thhalv10017234m.g Eutrema salsugineum HOM05D006133 ORTHO05D007855 4.9e-24 115.5 214 40.7
BraA04t18104Z Brassica rapa HOM05D006133 ORTHO05D007855 1.8e-23 113.6 85 70.6
Psat7g113640 Pisum sativum HOM05D006133 ORTHO05D007855 1.8e-23 113.6 216 46.3
Rhsim13G0177600 Rhododendron simsii HOM05D006133 ORTHO05D007855 1.8e-23 113.6 258 38.4
CDE04G1633 Ceratophyllum demersum HOM05D006133 ORTHO05D007855 4.7e-19 99.0 214 36.9
Zm00001eb063880 Zea mays HOM05D006133 ORTHO05D007855 4.7e-19 99.0 213 35.7
Os03g0837800 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 8.0e-19 98.2 192 36.5
A04p26010 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-18 97.4 184 40.2
C04p63360 Brassica napus HOM05D006133 ORTHO05D007855 1.4e-18 97.4 115 50.4
SMO353G0258 Selaginella moellendorffii HOM05D006133 ORTHO05D007855 1.4e-18 97.4 176 36.9
Cc01_g03500 Coffea canephora HOM05D006133 ORTHO05D007855 1.5e-17 94.0 216 38.4
Cpa.g.sc39.10 Carica papaya HOM05D006133 ORTHO05D007855 1.3e-16 90.9 116 51.7
Gohir.A01G166500 Gossypium hirsutum HOM05D006133 ORTHO05D007855 1.3e-16 90.9 91 63.7
Ciclev10017918m.g Citrus clementina HOM05D006133 ORTHO05D007855 2.2e-16 90.1 145 44.8
HPP92_006840 Vanilla planifolia HOM05D006133 ORTHO05D007855 2.9e-16 89.7 102 56.9
EL10Ac8g20377 Beta vulgaris HOM05D006133 ORTHO05D007855 3.7e-16 89.4 146 40.4
DCAR_028075 Daucus carota HOM05D006133 ORTHO05D007855 8.3e-16 88.2 215 47.0
AagrBONN_evm.TU.Sc2ySwM_228.202 Anthoceros agrestis HOM05D006133 ORTHO05D007855 2.4e-15 86.7 118 41.5
FAN11G1298 Fragaria x ananassa HOM05D006133 ORTHO05D007855 4.1e-15 85.9 156 41.7
BolC4t23106H Brassica oleracea HOM05D006133 ORTHO05D007855 9.2e-15 84.7 194 37.6
C04p15330 Brassica napus HOM05D006133 ORTHO05D007855 7.8e-14 81.6 151 39.7
FAN25G2154 Fragaria x ananassa HOM05D006133 ORTHO05D007855 7.8e-14 81.6 146 41.1
FAN21G1061 Fragaria x ananassa HOM05D006133 ORTHO05D007855 5.0e-13 79.0 144 41.0
Gohir.A11G286823 Gossypium hirsutum HOM05D006133 ORTHO05D007855 5.0e-13 79.0 76 67.1
BcaC02g11457 Brassica carinata HOM05D006133 ORTHO05D007855 3.3e-12 76.3 151 38.4
SGA_v2.0_scaffold499G52489 Striga asiatica HOM05D006133 ORTHO05D007855 2.8e-11 73.2 197 33.0
Mapoly0103s0052 Marchantia polymorpha HOM05D006133 ORTHO05D007855 2.2e-08 63.5 187 25.1
C04p15300 Brassica napus HOM05D006133 ORTHO05D007855 2.7e-06 56.6 34 82.4
Os07g0256300 Oryza sativa ssp. japonica HOM05D006133 ORTHO05D007855 4.6e-06 55.8 83 42.2


User provided reference genes

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