Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 6.4e-154 547.4 274 100.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 4.6e-83 312.0 277 60.6
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 1.7e-82 310.1 277 59.9
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 5.0e-82 308.5 274 60.6
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 5.0e-82 308.5 267 61.4
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 4.7e-80 302.0 279 58.1
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 6.2e-80 301.6 273 58.2
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.8e-79 300.1 273 59.0
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.0e-78 296.6 273 59.3
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 2.6e-78 296.2 275 55.6
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 3.4e-78 295.8 275 58.9
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 5.8e-78 295.0 280 57.9
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 7.5e-78 294.7 275 59.3
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.7e-77 293.5 274 56.2
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.7e-77 293.5 278 57.9
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 6.4e-77 291.6 275 58.2
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.1e-76 290.8 277 56.0
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 1.1e-76 290.8 275 54.9
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 9.2e-76 287.7 213 63.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.6e-75 287.0 277 55.6
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 3.0e-74 282.7 268 53.7
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.9e-73 280.0 241 58.1
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 2.5e-73 279.6 269 54.6
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 3.3e-73 279.3 271 57.9
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 5.6e-73 278.5 271 55.4
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 7.3e-73 278.1 275 53.8
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 7.3e-73 278.1 268 55.6
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 9.5e-73 277.7 190 69.5
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.2e-72 277.3 212 62.7
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 4.7e-72 275.4 279 52.7
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 1.4e-71 273.9 270 54.4
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.8e-71 273.5 268 53.4
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 2.3e-71 273.1 211 60.2
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 5.2e-71 271.9 225 60.0
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 5.2e-71 271.9 207 60.9
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 1.2e-70 270.8 214 60.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 2.0e-70 270.0 279 50.9
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 2.0e-70 270.0 200 63.5
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 2.0e-70 270.0 200 63.5
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 4.4e-70 268.9 271 52.4
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 4.4e-70 268.9 219 58.4
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 5.8e-70 268.5 270 54.4
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 5.8e-70 268.5 274 50.7
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 7.5e-70 268.1 262 57.3
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 9.9e-70 267.7 207 60.4
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 9.9e-70 267.7 269 54.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.3e-69 267.3 273 51.6
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.7e-69 266.9 215 60.5
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 2.9e-69 266.2 270 54.4
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 3.7e-69 265.8 225 57.8
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.7e-69 265.8 215 60.5
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 3.7e-69 265.8 216 59.7
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 6.4e-69 265.0 216 59.7
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 6.4e-69 265.0 207 59.9
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.1e-68 264.2 228 56.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.4e-68 263.8 224 58.0
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.9e-68 263.5 278 54.7
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.2e-68 262.7 272 51.8
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 3.2e-68 262.7 274 52.9
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 4.1e-68 262.3 273 50.9
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 7.1e-68 261.5 228 57.0
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 1.2e-67 260.8 273 56.0
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.6e-67 260.4 264 56.4
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 2.7e-67 259.6 277 52.0
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 4.6e-67 258.8 204 60.3
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 7.8e-67 258.1 272 54.4
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 7.8e-67 258.1 272 54.4
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 7.8e-67 258.1 272 54.4
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 2.3e-66 256.5 271 51.7
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 5.1e-66 255.4 269 54.6
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 3.3e-65 252.7 279 49.1
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 7.3e-65 251.5 198 62.6
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 9.5e-65 251.1 208 61.1
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.2e-64 250.8 206 58.7
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.2e-64 250.8 279 50.9
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 4.7e-64 248.8 259 51.4
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 8.1e-64 248.1 210 61.0
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.1e-63 247.7 209 56.9
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.8e-63 246.9 208 60.6
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 3.1e-63 246.1 207 58.5
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 4.0e-63 245.7 210 60.5
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 3.4e-62 242.7 214 60.3
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 9.9e-62 241.1 235 54.0
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 2.9e-61 239.6 233 54.9
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 2.9e-61 239.6 214 58.9
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 6.4e-61 238.4 207 57.0
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.4e-60 237.3 210 53.8
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 4.1e-60 235.7 204 56.4
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 5.4e-60 235.3 235 52.3
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 7.1e-60 235.0 211 56.9
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 4.6e-59 232.3 235 51.1
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 1.7e-58 230.3 214 56.1
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 4.7e-56 222.2 227 49.3
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 4.0e-55 219.2 216 52.3
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 9.9e-54 214.5 202 54.5
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.2e-53 213.4 230 48.7
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 4.3e-49 199.1 217 45.2
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.6e-49 198.7 217 45.2
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 9.6e-49 198.0 206 52.4
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.4e-47 193.4 198 53.0
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 9.0e-47 191.4 205 55.1
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 7.1e-44 181.8 148 58.8
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 2.5e-41 173.3 150 57.3
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.9e-36 157.1 220 40.5
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 8.7e-34 148.3 166 47.6
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.5e-28 130.2 189 41.3
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 1.8e-23 114.0 191 40.8
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 7.6e-22 108.6 237 33.3
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 4.2e-20 102.8 207 33.3
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 4.6e-19 99.4 169 34.9
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 8.8e-18 95.1 75 58.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.7e-16 89.7 129 42.6
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.0e-14 84.0 67 59.7
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 7.9e-11 72.0 68 55.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 2.3e-10 70.5 68 54.4
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 8.8e-10 68.6 64 51.6


User provided reference genes

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