Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 2.8e-252 874.8 432 100.0
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 2.7e-191 672.2 433 76.4
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 8.8e-190 667.2 432 74.5
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 1.7e-185 652.9 418 75.6
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 5.0e-185 651.4 416 76.2
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.5e-185 651.0 421 74.6
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 6.5e-185 651.0 416 75.5
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 1.2e-183 646.7 429 74.6
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 2.1e-183 646.0 437 73.2
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 4.7e-183 644.8 427 74.0
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 5.2e-182 641.3 415 75.4
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 1.5e-181 639.8 422 73.9
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 1.5e-181 639.8 435 72.6
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 2.0e-181 639.4 469 67.6
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.6e-181 639.0 436 72.7
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.6e-181 639.0 436 72.7
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 2.6e-181 639.0 415 74.7
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 2.6e-181 639.0 415 75.4
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 3.3e-181 638.6 414 75.8
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 4.4e-181 638.3 419 72.1
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 5.7e-181 637.9 433 71.1
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 7.5e-181 637.5 415 74.7
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 9.7e-181 637.1 428 73.4
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 1.3e-180 636.7 453 70.9
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 1.3e-180 636.7 423 73.3
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 1.7e-180 636.3 434 72.4
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 2.2e-180 636.0 422 73.7
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 2.8e-180 635.6 427 72.1
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 3.7e-180 635.2 415 74.2
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 1.1e-179 633.6 418 73.9
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 1.8e-179 632.9 423 73.8
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 3.1e-179 632.1 422 73.9
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 5.3e-179 631.3 437 71.2
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 5.3e-179 631.3 422 71.8
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 5.3e-179 631.3 435 72.0
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 7.0e-179 630.9 424 74.1
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 7.0e-179 630.9 431 72.2
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 1.6e-178 629.8 415 72.5
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 7.7e-178 627.5 420 73.8
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 7.7e-178 627.5 416 74.0
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 1.0e-177 627.1 422 73.5
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 1.7e-177 626.3 426 70.7
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 8.5e-177 624.0 422 71.6
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 1.2e-175 620.2 432 71.1
Glyma.08G159600 Glycine max HOM05D004598 ORTHO05D005550 8.0e-175 617.5 414 73.2
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 1.0e-174 617.1 419 72.6
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 2.3e-174 615.9 422 69.7
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 5.2e-174 614.8 421 68.9
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.2e-174 614.8 421 72.4
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 6.8e-174 614.4 424 70.0
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 2.0e-173 612.8 422 69.0
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 3.4e-173 612.1 430 68.8
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 9.8e-173 610.5 451 67.6
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 9.8e-173 610.5 475 65.1
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 9.8e-173 610.5 434 67.7
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 9.8e-173 610.5 420 70.2
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 2.2e-172 609.4 434 67.7
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 4.8e-172 608.2 432 67.8
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 6.3e-172 607.8 424 69.6
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 8.3e-172 607.4 422 70.4
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 8.3e-172 607.4 427 69.1
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 2.4e-171 605.9 428 68.5
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 2.4e-171 605.9 432 67.8
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 1.6e-170 603.2 429 69.0
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 3.5e-170 602.1 437 67.7
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 3.5e-170 602.1 433 68.4
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 5.9e-170 601.3 416 68.5
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 5.9e-170 601.3 429 68.8
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 7.7e-170 600.9 416 68.3
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 7.7e-170 600.9 394 74.6
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 1.0e-169 600.5 429 68.1
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 1.3e-169 600.1 438 67.6
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 5.0e-169 598.2 416 68.3
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.0e-166 589.0 498 61.2
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 2.0e-165 586.3 431 66.4
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 3.4e-165 585.5 391 71.6
Ciclev10001079m.g Citrus clementina HOM05D004598 ORTHO05D005550 4.9e-164 581.6 419 69.5
Rhsim11G0148800 Rhododendron simsii HOM05D004598 ORTHO05D005550 2.4e-163 579.3 420 68.6
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 7.0e-163 577.8 416 69.2
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 2.1e-159 566.2 428 65.7
AUR62026384 Chenopodium quinoa HOM05D004598 ORTHO05D005550 6.8e-158 561.2 379 69.7
Medtr1g058230 Medicago truncatula HOM05D004598 ORTHO05D005550 7.5e-157 557.8 415 68.4
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 1.6e-154 550.1 404 68.3
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 4.6e-154 548.5 416 67.1
Dinv08542 Davidia involucrata HOM05D004598 ORTHO05D005550 5.0e-153 545.0 409 67.2
QL11p052661 Quercus lobata HOM05D004598 ORTHO05D005550 1.2e-151 540.4 445 60.9
Aqoxy3G00619 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 2.0e-149 533.1 429 61.5
EL10Ac6g13343 Beta vulgaris HOM05D004598 ORTHO05D005550 1.2e-146 523.9 427 63.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 8.6e-145 517.7 415 64.1
HPP92_002259 Vanilla planifolia HOM05D004598 ORTHO05D005550 1.5e-144 516.9 385 65.2
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 1.2e-143 513.8 410 64.6
SEGI_01084 Sequoiadendron giganteum HOM05D004598 ORTHO05D005550 1.4e-139 500.4 369 65.9
Hma1.2p1_0315F.1_g122690 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.5e-138 495.7 336 72.9
Cfa010950 Carpinus fangiana HOM05D006110 ORTHO05D007774 1.0e-137 494.2 331 73.4
arahy.Tifrunner.gnm1.ann1.K5F1ZR Arachis hypogaea HOM05D004598 ORTHO05D005550 6.8e-134 481.5 325 72.3
arahy.Tifrunner.gnm1.ann1.B5R5MF Arachis hypogaea HOM05D004598 ORTHO05D005550 8.9e-134 481.1 327 71.6
AagrBONN_evm.TU.Sc2ySwM_368.2499 Anthoceros agrestis HOM05D004598 ORTHO05D005550 2.2e-132 476.5 414 59.4
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 6.4e-132 474.9 417 60.0
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 4.2e-131 472.2 353 64.9
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 1.2e-130 470.7 417 55.6
Sed0007699 Sechium edule HOM05D004598 ORTHO05D005550 3.0e-129 466.1 337 68.8
Os03g0670200 Oryza sativa ssp. japonica HOM05D004598 ORTHO05D005550 1.9e-128 463.4 435 54.0
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.6e-127 460.3 321 68.5
arahy.Tifrunner.gnm1.ann1.PEW2A9 Arachis hypogaea HOM05D004598 ORTHO05D005550 6.2e-127 458.4 334 68.6
Pp3c1_29840 Physcomitrium patens HOM05D004598 ORTHO05D005550 1.5e-125 453.8 419 54.9
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 3.0e-121 439.5 449 53.5
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 2.9e-116 422.9 404 54.7
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 6.7e-113 411.8 336 63.1
DCAR_027631 Daucus carota HOM05D004598 ORTHO05D005550 3.7e-111 406.0 312 64.7
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 7.1e-107 391.7 280 69.6
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 3.0e-105 386.3 418 51.4
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 9.6e-104 381.3 573 38.7
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 6.2e-103 378.6 276 67.8
Gohir.A11G320400 Gossypium hirsutum HOM05D004598 ORTHO05D005550 6.5e-100 368.6 370 55.4
arahy.Tifrunner.gnm1.ann1.BN9D0T Arachis hypogaea HOM05D004598 ORTHO05D005550 2.0e-93 347.1 416 48.1
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 3.4e-93 346.3 278 64.0
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 3.6e-90 336.3 234 70.9
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.6e-90 335.9 252 67.9
unitig_736.g22586 Utricularia gibba HOM05D004598 ORTHO05D005550 1.1e-88 331.3 265 58.9
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 1.4e-83 314.3 425 42.6
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 1.1e-80 304.7 422 42.9
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 2.2e-79 300.4 353 49.0
ECA240G3480 Erigeron canadensis HOM05D004598 ORTHO05D005550 2.2e-79 300.4 196 71.4
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 9.1e-78 295.0 395 44.3
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 2.6e-77 293.5 425 40.9
Cre14.g616200 Chlamydomonas reinhardtii HOM05D004598 ORTHO05D005550 2.1e-66 257.3 476 35.9
Zm00001eb096280 Zea mays HOM05D004598 ORTHO05D005550 5.2e-65 252.7 222 57.7
MD10G1130600 Malus domestica HOM05D004598 ORTHO05D005550 8.8e-65 251.9 227 55.9
Nn2g12459 Nelumbo nucifera HOM05D004598 ORTHO05D005550 1.7e-63 247.7 146 77.4
CSS0012948 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 1.2e-61 241.5 149 76.5
Rhsim11G0028900 Rhododendron simsii HOM05D004598 ORTHO05D005550 4.5e-61 239.6 357 40.9
BNapus_Darmor_BZH_scaffold_38p00840 Brassica napus HOM05D004598 ORTHO05D005550 8.5e-60 235.3 153 73.2
Psat6g012400 Pisum sativum HOM05D004598 ORTHO05D005550 1.1e-59 235.0 162 71.6
MCO01G023 Micromonas commoda HOM05D004598 ORTHO05D005550 3.4e-56 223.4 421 36.8
Cfa027243 Carpinus fangiana HOM05D004598 ORTHO05D005550 9.1e-54 215.3 416 34.6
FAN24G1674 Fragaria x ananassa HOM05D004598 ORTHO05D005550 9.1e-54 215.3 149 70.5
BolC9t58552H Brassica oleracea HOM05D004598 ORTHO05D005550 1.6e-53 214.5 257 50.6
TAR160G0002 Trochodendron aralioides HOM05D004598 ORTHO05D005550 3.5e-53 213.4 183 59.6
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 2.5e-51 207.2 133 76.7
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 1.6e-50 204.5 141 69.5
Lj2E933T1 Lonicera japonica HOM05D004598 ORTHO05D005550 5.9e-45 186.0 111 80.2
Dinv26897 Davidia involucrata HOM05D004598 ORTHO05D005550 5.6e-43 179.5 115 73.9
BcaB01g04740 Brassica carinata HOM05D004598 ORTHO05D005550 1.6e-34 151.4 124 68.5
vmacro20475 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.5e-27 128.3 84 71.4
vmacro22736 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.5e-27 128.3 84 71.4
PRCOL_00005536 Prasinoderma coloniale HOM05D004598 ORTHO05D005550 5.6e-27 126.3 422 28.0
MELO3C010621.2 Cucumis melo HOM05D004598 ORTHO05D005550 3.1e-25 120.6 94 64.9
Rhsim09G0084000 Rhododendron simsii HOM05D004598 ORTHO05D005550 3.9e-20 103.6 61 78.7
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.4e-14 85.1 330 26.1
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 9.3e-14 82.4 110 45.5
CAN.G890.17 Capsicum annuum HOM05D004598 ORTHO05D005550 3.9e-12 77.0 48 72.9
SHI39035 Sapria himalayana HOM05D004598 ORTHO05D005550 5.3e-09 66.6 45 73.3
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 5.3e-09 66.6 53 58.5
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 5.3e-09 66.6 53 56.6
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 6.9e-09 66.2 53 56.6
Medtr6g051670 Medicago truncatula HOM05D004598 ORTHO05D005550 9.0e-09 65.9 43 60.5
SHI47796 Sapria himalayana HOM05D004598 ORTHO05D005550 4.4e-08 63.5 51 58.8


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