Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0783 Punica granatum HOM05D007689 ORTHO05D009701 1.9e-150 535.8 265 100.0
Nn4g25673 Nelumbo nucifera HOM05D007689 ORTHO05D009701 1.7e-71 273.5 208 65.4
Lj3C827T12 Lonicera japonica HOM05D007689 ORTHO05D009701 3.3e-70 269.2 207 65.7
Actinidia40349 Actinidia chinensis HOM05D007689 ORTHO05D009701 4.7e-69 265.4 209 63.6
Gohir.A12G127300 Gossypium hirsutum HOM05D007689 ORTHO05D009701 8.9e-68 261.2 210 61.4
CSS0014112 Camellia sinensis var. sinensis HOM05D007689 ORTHO05D009701 1.5e-67 260.4 207 62.3
Aqoxy2G02828 Aquilegia oxysepala HOM05D007689 ORTHO05D009701 3.4e-67 259.2 210 60.5
TAR362G1121 Trochodendron aralioides HOM05D007689 ORTHO05D009701 5.8e-67 258.5 212 61.8
Cpa.g.sc151.52 Carica papaya HOM05D007689 ORTHO05D009701 9.9e-67 257.7 210 61.4
Gohir.D12G130800 Gossypium hirsutum HOM05D007689 ORTHO05D009701 9.9e-67 257.7 210 61.0
Gorai.008G142100 Gossypium raimondii HOM05D007689 ORTHO05D009701 1.3e-66 257.3 210 61.0
Hma1.2p1_0013F.1_g008950 Hydrangea macrophylla HOM05D007689 ORTHO05D009701 1.7e-66 256.9 207 64.7
DCAR_027020 Daucus carota HOM05D007689 ORTHO05D009701 1.1e-65 254.2 211 60.7
Nn3g21610 Nelumbo nucifera HOM05D007689 ORTHO05D009701 3.2e-65 252.7 204 61.3
Thecc.01G308800 Theobroma cacao HOM05D007689 ORTHO05D009701 4.1e-65 252.3 209 61.2
QL12p028845 Quercus lobata HOM05D007689 ORTHO05D009701 5.4e-65 251.9 209 62.2
QL12p028868 Quercus lobata HOM05D007689 ORTHO05D009701 7.1e-65 251.5 209 62.2
Migut.G00105 Erythranthe guttata HOM05D007689 ORTHO05D009701 9.2e-65 251.1 207 60.4
Gohir.D07G131100 Gossypium hirsutum HOM05D007689 ORTHO05D009701 2.1e-64 250.0 209 61.2
Gorai.001G142200 Gossypium raimondii HOM05D007689 ORTHO05D009701 2.1e-64 250.0 209 61.2
COL.COLO4_23276 Corchorus olitorius HOM05D007689 ORTHO05D009701 6.0e-64 248.4 209 60.8
CSS0034368 Camellia sinensis var. sinensis HOM05D007689 ORTHO05D009701 6.6e-63 245.0 210 59.0
PSO675G8711 Papaver somniferum HOM05D007689 ORTHO05D009701 6.6e-63 245.0 207 58.5
PSO541G3971 Papaver somniferum HOM05D007689 ORTHO05D009701 8.6e-63 244.6 207 58.5
Nitab4.5_0001097g0080 Nicotiana tabacum HOM05D007689 ORTHO05D009701 1.5e-62 243.8 210 58.6
Eucgr.K03520 Eucalyptus grandis HOM05D007689 ORTHO05D009701 4.3e-62 242.3 210 59.0
Duzib133G1147 Durio zibethinus HOM05D007689 ORTHO05D009701 7.3e-62 241.5 209 59.3
Peaxi162Scf00102g00110 Petunia axillaris HOM05D007689 ORTHO05D009701 1.2e-61 240.7 219 56.2
CiPaw.07G114300 Carya illinoinensis HOM05D007689 ORTHO05D009701 1.6e-61 240.4 209 58.4
MSTRG.10131 Avicennia marina HOM05D007689 ORTHO05D009701 3.6e-61 239.2 211 56.4
Duzib138G0701 Durio zibethinus HOM05D007689 ORTHO05D009701 3.6e-61 239.2 207 59.9
Hma1.2p1_0212F.1_g090150 Hydrangea macrophylla HOM05D007689 ORTHO05D009701 6.2e-61 238.4 210 59.0
Sc05g0003280 Simmondsia chinensis HOM05D007689 ORTHO05D009701 1.8e-60 236.9 207 59.4
vmacro02420 Vaccinium macrocarpon HOM05D007689 ORTHO05D009701 2.4e-60 236.5 209 59.3
Cc03_g01200 Coffea canephora HOM05D007689 ORTHO05D009701 4.0e-60 235.7 213 56.8
Manes.01G224500 Manihot esculenta HOM05D007689 ORTHO05D009701 5.2e-60 235.3 209 56.5
Solyc05g054405.1 Solanum lycopersicum HOM05D007689 ORTHO05D009701 6.8e-60 235.0 219 54.8
Nitab4.5_0004002g0030 Nicotiana tabacum HOM05D007689 ORTHO05D009701 8.9e-60 234.6 215 56.7
Potri.002G199700 Populus trichocarpa HOM05D007689 ORTHO05D009701 8.9e-60 234.6 209 56.0
SalBow8G2262 Salvia bowleyana HOM05D007689 ORTHO05D009701 8.9e-60 234.6 207 57.5
TWI36G0491 Tripterygium wilfordii HOM05D007689 ORTHO05D009701 8.9e-60 234.6 210 59.0
Sopen05g032890 Solanum pennellii HOM05D007689 ORTHO05D009701 1.2e-59 234.2 219 54.8
Dinv33094 Davidia involucrata HOM05D007689 ORTHO05D009701 1.5e-59 233.8 209 58.4
PGR044G1870 Punica granatum HOM05D007689 ORTHO05D009701 1.5e-59 233.8 206 59.2
Cfa005850 Carpinus fangiana HOM05D007689 ORTHO05D009701 2.0e-59 233.4 211 56.9
Lsat_1_v5_gn_6_19380 Lactuca sativa HOM05D007689 ORTHO05D009701 2.0e-59 233.4 207 57.5
Potri.014G124300 Populus trichocarpa HOM05D007689 ORTHO05D009701 3.4e-59 232.6 209 55.5
Nitab4.5_0000116g0110 Nicotiana tabacum HOM05D007689 ORTHO05D009701 5.8e-59 231.9 207 58.0
CiPaw.08G092000 Carya illinoinensis HOM05D007689 ORTHO05D009701 7.6e-59 231.5 210 58.1
SalBow8G1378 Salvia bowleyana HOM05D007689 ORTHO05D009701 7.6e-59 231.5 207 56.0
Atru.chr5.1063 Acer truncatum HOM05D007689 ORTHO05D009701 1.3e-58 230.7 243 51.9
EL10Ac7g17615 Beta vulgaris HOM05D007689 ORTHO05D009701 1.7e-58 230.3 210 56.2
MBI18_g04585_MAGBIO Magnolia biondii HOM05D007689 ORTHO05D009701 1.7e-58 230.3 211 56.9
AUR62008746 Chenopodium quinoa HOM05D007689 ORTHO05D009701 3.8e-58 229.2 211 56.4
Actinidia25831 Actinidia chinensis HOM05D007689 ORTHO05D009701 4.9e-58 228.8 210 58.1
Lj2A1202T18 Lonicera japonica HOM05D007689 ORTHO05D009701 6.4e-58 228.4 212 57.1
CANSAT25G0084 Cannabis sativa HOM05D007689 ORTHO05D009701 8.4e-58 228.0 208 56.7
Ciclev10020446m.g Citrus clementina HOM05D007689 ORTHO05D009701 8.4e-58 228.0 209 55.0
PGSC0003DMG402023433 Solanum tuberosum HOM05D007689 ORTHO05D009701 2.4e-57 226.5 219 53.4
Haze_04999 Corylus avellana HOM05D007689 ORTHO05D009701 3.2e-57 226.1 209 56.0
MD03G1298300 Malus domestica HOM05D007689 ORTHO05D009701 2.1e-56 223.4 206 55.3
AUR62025494 Chenopodium quinoa HOM05D007689 ORTHO05D009701 2.7e-56 223.0 203 57.6
Sabra14G0092400 Salix brachista HOM05D007689 ORTHO05D009701 1.0e-55 221.1 209 54.5
Rhsim01G0288800 Rhododendron simsii HOM05D007689 ORTHO05D009701 1.7e-55 220.3 208 55.3
PSO407G0153 Papaver somniferum HOM05D007689 ORTHO05D009701 3.9e-55 219.2 207 55.6
CAN.G668.28 Capsicum annuum HOM05D007689 ORTHO05D009701 6.6e-55 218.4 209 55.5
Ah.15g092850 Amaranthus hybridus HOM05D007689 ORTHO05D009701 2.5e-54 216.5 210 53.8
Prupe.8G269000 Prunus persica HOM05D007689 ORTHO05D009701 3.3e-54 216.1 212 54.7
Eucgr.H04024 Eucalyptus grandis HOM05D007689 ORTHO05D009701 7.3e-54 214.9 170 62.9
Peaxi162Scf00001g00284 Petunia axillaris HOM05D007689 ORTHO05D009701 9.6e-54 214.5 184 60.3
HanXRQChr02g0049021 Helianthus annuus HOM05D007689 ORTHO05D009701 6.2e-53 211.8 207 53.6
HanXRQChr02g0049031 Helianthus annuus HOM05D007689 ORTHO05D009701 6.2e-53 211.8 207 54.6
SalBow8G1534 Salvia bowleyana HOM05D007689 ORTHO05D009701 6.2e-53 211.8 208 52.9
SalBow8G3879 Salvia bowleyana HOM05D007689 ORTHO05D009701 6.2e-53 211.8 208 52.9
ECA233G6144 Erigeron canadensis HOM05D007689 ORTHO05D009701 1.8e-52 210.3 207 54.6
PSO170G4418 Papaver somniferum HOM05D007689 ORTHO05D009701 3.1e-52 209.5 176 59.7
Solyc09g075620.3 Solanum lycopersicum HOM05D007689 ORTHO05D009701 1.3e-50 204.1 209 53.1
CAN.G1013.34 Capsicum annuum HOM05D007689 ORTHO05D009701 2.2e-50 203.4 199 53.8
Sopen09g030420 Solanum pennellii HOM05D007689 ORTHO05D009701 2.9e-50 203.0 209 53.1
FvH4_5g39660 Fragaria vesca HOM05D007689 ORTHO05D009701 3.0e-47 193.0 214 49.5
FAN18G1969 Fragaria x ananassa HOM05D007689 ORTHO05D009701 3.9e-47 192.6 216 49.1
FAN18G2820 Fragaria x ananassa HOM05D007689 ORTHO05D009701 8.7e-47 191.4 209 49.8
HPP92_015998 Vanilla planifolia HOM05D007689 ORTHO05D009701 1.1e-46 191.0 207 49.3
FAN08G2552 Fragaria x ananassa HOM05D007689 ORTHO05D009701 1.5e-46 190.7 207 49.8
GSVIVG01028077001 Vitis vinifera HOM05D007689 ORTHO05D009701 1.9e-46 190.3 170 59.4
RcHm_v2.0_Chr7g0241971 Rosa chinensis HOM05D007689 ORTHO05D009701 1.3e-45 187.6 234 48.3
Nitab4.5_0005180g0050 Nicotiana tabacum HOM05D007689 ORTHO05D009701 4.5e-43 179.1 181 56.4
Oeu016478.1 Olea europaea HOM05D007689 ORTHO05D009701 2.2e-42 176.8 166 56.0
Ah.08g213490 Amaranthus hybridus HOM05D007689 ORTHO05D009701 1.5e-38 164.1 208 47.6
Actinidia21015 Actinidia chinensis HOM05D007689 ORTHO05D009701 1.7e-26 124.0 113 58.4
vmacro15126 Vaccinium macrocarpon HOM05D007689 ORTHO05D009701 5.0e-26 122.5 194 40.7
Sabra02G0158700 Salix brachista HOM05D007689 ORTHO05D009701 8.7e-23 111.7 214 35.0
Pp3c21_18970 Physcomitrium patens HOM05D006751 ORTHO05D008710 1.2e-16 91.3 199 30.7
Gorai.007G157000 Gossypium raimondii HOM05D006751 ORTHO05D008710 6.1e-16 89.0 223 32.3
VMungo1383G3158 Vigna mungo HOM05D006751 ORTHO05D008710 6.1e-16 89.0 202 30.2
SEGI_02078 Sequoiadendron giganteum HOM05D006751 ORTHO05D008710 3.9e-15 86.3 244 28.3
AL9U11370 Arabidopsis lyrata HOM05D006751 ORTHO05D008710 8.8e-15 85.1 197 29.4
MSTRG.18827 Avicennia marina HOM05D006751 ORTHO05D008710 8.8e-15 85.1 190 32.1
GSVIVG01004748001 Vitis vinifera HOM05D006751 ORTHO05D008710 1.1e-14 84.7 203 29.6
ClCG09G008710 Citrullus lanatus HOM05D006751 ORTHO05D008710 2.0e-14 84.0 203 31.5
Manes.12G049300 Manihot esculenta HOM05D006751 ORTHO05D008710 2.0e-14 84.0 197 31.0
AT4G13030 Arabidopsis thaliana HOM05D006751 ORTHO05D008710 2.5e-14 83.6 205 28.8
Dinv28842 Davidia involucrata HOM05D006751 ORTHO05D008710 2.5e-14 83.6 198 30.8
Sed0014566 Sechium edule HOM05D006751 ORTHO05D008710 2.5e-14 83.6 202 28.7
Solyc06g083220.3 Solanum lycopersicum HOM05D006751 ORTHO05D008710 2.5e-14 83.6 202 33.2
Gohir.A11G140300 Gossypium hirsutum HOM05D006751 ORTHO05D008710 3.3e-14 83.2 224 31.7
FvH4_2g18360 Fragaria vesca HOM05D006751 ORTHO05D008710 5.7e-14 82.4 202 33.2
Peaxi162Scf01312g00069 Petunia axillaris HOM05D006751 ORTHO05D008710 5.7e-14 82.4 195 31.3
Sc17g0001950 Simmondsia chinensis HOM05D006751 ORTHO05D009307 7.4e-14 82.0 202 31.7
EL10Ac7g17934 Beta vulgaris HOM05D006751 ORTHO05D008710 9.7e-14 81.6 210 30.5
CiPaw.13G050300 Carya illinoinensis HOM05D006751 ORTHO05D008710 9.7e-14 81.6 204 30.4
CsaV3_7G026250 Cucumis sativus L. HOM05D006751 ORTHO05D008710 9.7e-14 81.6 203 30.0
Peaxi162Scf01312g00068 Petunia axillaris HOM05D006751 ORTHO05D008710 9.7e-14 81.6 205 32.2
HanXRQChr07g0193061 Helianthus annuus HOM05D006751 ORTHO05D008710 1.3e-13 81.3 200 30.0
Duzib133G0478 Durio zibethinus HOM05D006751 ORTHO05D008710 1.7e-13 80.9 223 29.6
RcHm_v2.0_Chr6g0283741 Rosa chinensis HOM05D006751 ORTHO05D008710 1.7e-13 80.9 198 31.3
Aqoxy2G03936 Aquilegia oxysepala HOM05D006751 ORTHO05D008710 2.2e-13 80.5 175 33.1
Phvul.008G132700 Phaseolus vulgaris HOM05D006751 ORTHO05D008710 2.2e-13 80.5 200 29.0
Prupe.8G196400 Prunus persica HOM05D006751 ORTHO05D008710 2.2e-13 80.5 203 32.0
Nitab4.5_0003020g0170 Nicotiana tabacum HOM05D006751 ORTHO05D008710 2.8e-13 80.1 201 32.8
QL09p049892 Quercus lobata HOM05D006751 ORTHO05D008710 3.7e-13 79.7 205 30.2
Sopen06g034610 Solanum pennellii HOM05D006751 ORTHO05D008710 3.7e-13 79.7 190 33.7
MELO3C021072.2 Cucumis melo HOM05D006751 ORTHO05D008710 4.8e-13 79.3 199 30.2
AUR62016527 Chenopodium quinoa HOM05D006751 ORTHO05D008710 6.3e-13 79.0 210 29.5
Cc01_g16530 Coffea canephora HOM05D006751 ORTHO05D008710 6.3e-13 79.0 183 32.2
PGSC0003DMG400020172 Solanum tuberosum HOM05D006751 ORTHO05D008710 6.3e-13 79.0 183 31.7
Rhsim01G0251000 Rhododendron simsii HOM05D006751 ORTHO05D008710 8.2e-13 78.6 198 31.3
PSO017G4001 Papaver somniferum HOM05D006751 ORTHO05D008710 1.1e-12 78.2 195 31.3
vmacro14722 Vaccinium macrocarpon HOM05D006751 ORTHO05D008710 1.1e-12 78.2 198 31.3
AUR62001149 Chenopodium quinoa HOM05D006751 ORTHO05D008710 1.4e-12 77.8 201 29.4
MD10G1157500 Malus domestica HOM05D006751 ORTHO05D008710 1.4e-12 77.8 181 29.3
Sp7g10140 Schrenkiella parvula HOM05D006751 ORTHO05D008710 1.4e-12 77.8 193 28.5
FvH4_2g18361 Fragaria vesca HOM05D006751 ORTHO05D008710 1.8e-12 77.4 178 28.1
Gohir.D11G146600 Gossypium hirsutum HOM05D006751 ORTHO05D008710 1.8e-12 77.4 223 31.4
DCAR_012676 Daucus carota HOM05D006751 ORTHO05D008710 2.4e-12 77.0 197 30.5
Medtr7g055720 Medicago truncatula HOM05D006751 ORTHO05D008710 2.4e-12 77.0 199 29.6
TWI18G0571 Tripterygium wilfordii HOM05D006751 ORTHO05D008710 2.4e-12 77.0 199 29.1
MD05G1169200 Malus domestica HOM05D006751 ORTHO05D008710 3.1e-12 76.6 190 29.5
Hma1.2p1_0149F.1_g066540 Hydrangea macrophylla HOM05D006751 ORTHO05D008710 4.1e-12 76.3 198 29.3
Potri.002G247400 Populus trichocarpa HOM05D006751 ORTHO05D008710 4.1e-12 76.3 200 28.5
Glyma.18G158800 Glycine max HOM05D006751 ORTHO05D008710 5.3e-12 75.9 199 28.1
Cfa010403 Carpinus fangiana HOM05D006751 ORTHO05D008710 6.9e-12 75.5 204 28.9
Medtr7g055730 Medicago truncatula HOM05D006751 ORTHO05D008710 6.9e-12 75.5 181 29.8
Nn1g08194 Nelumbo nucifera HOM05D006751 ORTHO05D008710 6.9e-12 75.5 199 33.2
Actinidia09459 Actinidia chinensis HOM05D006751 ORTHO05D008710 9.1e-12 75.1 207 30.4
Lj1g0007193 Lotus japonicus HOM05D006751 ORTHO05D008710 9.1e-12 75.1 196 28.1
MBI16_g06251_MAGBIO Magnolia biondii HOM05D006751 ORTHO05D008710 1.2e-11 74.7 204 27.5
Hund05587 Selenicereus undatus HOM05D006751 ORTHO05D008710 1.2e-11 74.7 206 29.1
Thecc.01G216600 Theobroma cacao HOM05D006751 ORTHO05D008710 1.2e-11 74.7 201 29.9
Thecc.01G216700 Theobroma cacao HOM05D006751 ORTHO05D008710 1.5e-11 74.3 201 30.3
TAR636G1901 Trochodendron aralioides HOM05D006751 ORTHO05D008710 1.5e-11 74.3 195 27.7
Actinidia23767 Actinidia chinensis HOM05D006751 ORTHO05D008710 2.6e-11 73.6 207 30.4
FAN24G0495 Fragaria x ananassa HOM05D006751 ORTHO05D008710 2.6e-11 73.6 182 30.8
Lj1C90G7 Lonicera japonica HOM05D006751 ORTHO05D008710 2.6e-11 73.6 196 27.0
Cpa.g.sc8.122 Carica papaya HOM05D006751 ORTHO05D008710 4.5e-11 72.8 198 28.8
Eucgr.H00756 Eucalyptus grandis HOM05D006751 ORTHO05D008710 4.5e-11 72.8 204 29.9
Lsat_1_v5_gn_9_17301 Lactuca sativa HOM05D006751 ORTHO05D008710 4.5e-11 72.8 212 29.2
TPR.G28325 Trifolium pratense HOM05D006751 ORTHO05D008710 5.9e-11 72.4 199 28.6
THA.LOC104821658 Tarenaya hassleriana HOM05D006751 ORTHO05D008710 1.0e-10 71.6 202 29.2
Carub.0007s2974 Capsella rubella HOM05D006751 ORTHO05D008710 5.0e-10 69.3 179 27.4
FAN15G3221 Fragaria x ananassa HOM05D006751 ORTHO05D008710 5.0e-10 69.3 185 25.9
TPR.G29151 Trifolium pratense HOM05D006751 ORTHO05D008710 5.0e-10 69.3 200 28.5
arahy.Tifrunner.gnm1.ann1.5UHD3M Arachis hypogaea HOM05D006751 ORTHO05D008710 6.5e-10 68.9 199 28.1
Ca_07507_v3 Cicer arietinum L. HOM05D006751 ORTHO05D008710 6.5e-10 68.9 200 29.0
A08p07190 Brassica napus HOM05D006751 ORTHO05D008710 1.4e-09 67.8 172 29.1
BraA08t32731Z Brassica rapa HOM05D006751 ORTHO05D008710 1.4e-09 67.8 172 29.1
ATR0681G155 Amborella trichopoda HOM05D006751 ORTHO05D008710 1.9e-09 67.4 178 29.8
arahy.Tifrunner.gnm1.ann1.HN87AT Arachis hypogaea HOM05D006751 ORTHO05D008710 1.9e-09 67.4 224 26.3
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 1.9e-09 67.4 172 29.1
C08p08830 Brassica napus HOM05D006751 ORTHO05D008710 1.9e-09 67.4 172 29.1
BolC8t47729H Brassica oleracea HOM05D006751 ORTHO05D008710 1.9e-09 67.4 172 29.1
COL.COLO4_16111 Corchorus olitorius HOM05D006751 ORTHO05D008710 1.9e-09 67.4 210 28.1
PSO063G4788 Papaver somniferum HOM05D006751 ORTHO05D008710 1.9e-09 67.4 182 29.7
Atru.chr6.1445 Acer truncatum HOM05D006751 ORTHO05D008710 3.2e-09 66.6 200 26.5
Oeu003263.2 Olea europaea HOM05D006751 ORTHO05D008710 5.5e-09 65.9 173 31.2
BcaB04g17726 Brassica carinata HOM05D006751 ORTHO05D008710 7.2e-09 65.5 193 25.9
Ciclev10020463m.g Citrus clementina HOM05D006751 ORTHO05D008710 1.6e-08 64.3 205 26.8
CARHR218330 Cardamine hirsuta HOM05D006751 ORTHO05D008710 2.7e-08 63.5 175 29.1
PGR083G0288 Punica granatum HOM05D006751 ORTHO05D008710 3.6e-08 63.2 210 25.2
Migut.D02514 Erythranthe guttata HOM05D006751 ORTHO05D008710 2.3e-07 60.5 188 29.3
Oeu041603.1 Olea europaea HOM05D006751 ORTHO05D008710 1.5e-06 57.8 165 31.5


User provided reference genes

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