Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 4.0e-274 947.6 509 100.0
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.7e-256 889.0 509 90.6
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 2.4e-255 885.2 509 92.1
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.6e-254 882.5 510 89.4
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 2.0e-254 882.1 509 88.8
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 6.0e-254 880.6 509 89.4
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 6.0e-254 880.6 511 89.2
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 89.4
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 1.1e-252 876.3 509 90.2
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 1.5e-252 875.9 510 88.4
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 1.9e-252 875.5 510 89.4
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.4
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 7.3e-252 873.6 509 90.6
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 9.5e-252 873.2 509 90.6
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 89.0
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 2.8e-251 871.7 510 88.2
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 6.2e-251 870.5 510 87.6
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.4e-250 869.4 509 88.4
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.4e-250 869.4 511 87.9
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 87.8
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 1.8e-250 869.0 509 88.6
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.8e-250 869.0 510 88.0
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 3.1e-250 868.2 510 87.8
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 8.9e-250 866.7 511 88.1
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.2e-249 866.3 510 87.1
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 1.5e-249 865.9 511 87.9
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 2.0e-249 865.5 510 87.5
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 2.6e-249 865.1 511 87.9
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 2.6e-249 865.1 510 89.8
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 5.8e-249 864.0 511 87.3
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 5.8e-249 864.0 509 87.0
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 9.9e-249 863.2 510 86.5
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 2.2e-248 862.1 510 87.6
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 2.9e-248 861.7 509 86.6
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 4.9e-248 860.9 510 87.3
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.4e-248 860.5 512 87.7
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 8.3e-248 860.1 510 89.0
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.1e-247 859.8 510 87.1
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 1.4e-247 859.4 511 87.3
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.9e-247 859.0 510 86.3
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 2.4e-247 858.6 526 85.4
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 3.2e-247 858.2 510 86.5
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 5.4e-247 857.4 509 87.2
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 5.4e-247 857.4 510 87.3
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 9.2e-247 856.7 510 86.7
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 1.2e-246 856.3 510 86.5
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.6e-246 855.9 509 86.4
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 2.1e-246 855.5 510 86.5
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 2.1e-246 855.5 509 86.4
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 2.1e-246 855.5 510 86.3
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 2.7e-246 855.1 510 86.5
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 86.7
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 3.5e-246 854.7 510 86.7
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 4.6e-246 854.4 510 85.9
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 6.0e-246 854.0 510 86.9
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 6.0e-246 854.0 510 86.9
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 6.0e-246 854.0 511 86.9
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.3e-245 852.0 510 85.3
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 2.3e-245 852.0 510 86.5
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 3.0e-245 851.7 510 85.9
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 3.0e-245 851.7 510 86.3
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 3.9e-245 851.3 510 84.9
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 5.1e-245 850.9 509 85.5
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 6.6e-245 850.5 510 86.3
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 8.6e-245 850.1 510 86.5
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 1.1e-244 849.7 510 86.5
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.5e-244 849.4 510 85.5
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.9e-244 849.0 510 84.7
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 1.9e-244 849.0 510 86.7
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 2.5e-244 848.6 512 88.1
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 3.3e-244 848.2 510 84.7
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 5.6e-244 847.4 510 84.7
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 7.3e-244 847.0 510 85.7
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 1.6e-243 845.9 510 85.5
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 85.3
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 2.1e-243 845.5 510 85.5
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 3.6e-243 844.7 510 84.9
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 3.6e-243 844.7 510 87.1
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 4.7e-243 844.3 511 85.1
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 4.7e-243 844.3 510 85.3
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 85.3
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 8.1e-243 843.6 509 84.7
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 85.3
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.8e-242 842.4 510 85.1
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 8.9e-242 840.1 510 85.5
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 8.9e-242 840.1 499 87.6
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.5e-241 839.3 509 84.5
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 2.0e-241 839.0 549 80.7
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.4e-241 838.2 510 85.1
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 3.4e-241 838.2 510 87.1
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 3.4e-241 838.2 510 87.1
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 4.4e-241 837.8 510 86.9
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 4.4e-241 837.8 512 86.5
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 7.6e-241 837.0 509 84.3
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 7.6e-241 837.0 509 84.3
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 7.6e-241 837.0 509 84.3
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 9.9e-241 836.6 509 84.1
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 9.9e-241 836.6 510 86.9
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 3.8e-240 834.7 493 90.5
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 6.4e-240 833.9 509 83.9
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 5.4e-239 830.9 509 83.5
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 7.1e-239 830.5 510 83.3
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 9.2e-239 830.1 511 84.5
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 9.2e-239 830.1 494 88.7
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 3.5e-238 828.2 511 84.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 3.9e-237 824.7 510 83.1
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 6.6e-237 823.9 511 84.1
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 8.7e-237 823.5 511 84.1
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 3.3e-236 821.6 505 85.9
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 1.1e-234 816.6 510 82.0
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 1.4e-234 816.2 494 85.6
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 4.0e-234 814.7 524 81.3
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 1.2e-233 813.1 510 82.7
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 1.1e-231 806.6 494 84.0
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 4.2e-231 804.7 493 84.0
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 1.0e-229 800.0 472 89.0
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 3.0e-229 798.5 556 77.3
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.9e-229 798.1 510 81.2
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 1.3e-227 793.1 512 83.8
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 1.6e-227 792.7 492 83.3
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.8e-226 789.3 509 80.9
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 6.9e-226 787.3 509 82.7
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.3e-224 783.1 547 76.1
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 1.3e-224 783.1 511 79.3
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.1e-219 765.8 511 78.1
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 6.2e-219 764.2 524 78.4
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 6.2e-219 764.2 524 78.4
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 8.1e-219 763.8 511 78.5
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 1.3e-208 729.9 440 85.5
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 3.4e-201 705.3 472 80.7
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.5e-199 699.1 509 74.7
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 1.6e-198 696.4 511 73.8
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.7e-195 686.4 413 86.9
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 8.2e-195 684.1 503 73.2
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 1.6e-190 669.8 516 65.3
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.0e-184 650.6 503 68.0
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 2.9e-176 622.5 468 71.2
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 3.8e-176 622.1 375 85.3
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 4.4e-172 608.6 514 59.3
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 3.5e-169 599.0 364 87.6
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 1.2e-166 590.5 364 83.5
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 6.8e-165 584.7 511 60.5
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 2.2e-163 579.7 511 58.7
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.1e-162 577.4 382 78.3
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.3e-159 565.8 494 58.1
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 4.4e-156 555.4 504 62.5
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 7.0e-154 548.1 325 89.2
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.3e-152 543.9 346 81.5
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.9e-152 542.7 499 54.3
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 9.2e-146 521.2 456 66.7
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 2.1e-142 510.0 307 86.6
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.2e-134 484.2 284 89.1
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 3.3e-127 459.5 383 60.3
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.4e-124 449.5 254 90.9
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 7.1e-114 415.2 514 46.1
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.4e-109 401.0 236 89.0
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 8.7e-104 381.7 485 43.5
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 2.4e-101 373.6 279 71.3
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.2e-100 371.3 386 52.8
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 4.8e-94 349.4 519 37.6
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 4.8e-78 296.2 199 80.4
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 3.5e-68 263.5 502 39.2
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.3e-67 261.5 343 45.2
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.8e-61 241.1 144 86.1
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 5.7e-55 219.5 354 40.1
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.8e-54 217.2 288 44.1
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 8.0e-49 199.1 117 84.6
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.4e-45 187.6 206 51.0
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.5e-42 177.6 197 49.7
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 3.7e-38 163.7 143 65.7
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 2.0e-36 157.9 106 79.2
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.6e-31 141.0 119 58.8
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 9.2e-29 132.5 82 85.4
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 3.7e-22 110.5 156 47.4
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 4.7e-09 67.0 56 57.1
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 8.1e-09 66.2 37 83.8
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 1.2e-07 62.4 96 47.9


User provided reference genes

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