Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 2.7e-149 531.9 261 100.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.4e-33 146.7 270 41.9
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 3.5e-32 142.9 243 42.8
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 4.6e-32 142.5 251 43.4
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 5.9e-32 142.1 229 45.9
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-31 140.2 232 43.1
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-31 140.2 232 43.1
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 8.6e-31 138.3 268 41.4
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.1e-30 137.9 265 40.8
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.9e-30 137.1 265 40.8
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.5e-30 136.7 232 42.2
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.8e-29 133.3 231 43.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 8.0e-29 131.7 226 43.4
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.0e-28 131.3 225 40.4
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 2.3e-28 130.2 269 37.5
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 5.2e-28 129.0 263 39.5
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 8.9e-28 128.3 249 39.4
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.5e-27 127.5 238 39.5
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.0e-27 127.1 229 44.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.6e-27 126.7 238 41.2
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 3.4e-27 126.3 237 40.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 5.8e-27 125.6 241 41.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 9.8e-27 124.8 248 41.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 9.8e-27 124.8 256 40.2
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 9.8e-27 124.8 231 39.0
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.9e-26 123.2 225 39.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.7e-26 122.9 243 41.6
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 4.9e-26 122.5 250 39.6
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.9e-26 122.5 237 41.8
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 6.4e-26 122.1 242 39.7
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 8.3e-26 121.7 255 38.4
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.1e-25 121.3 224 37.9
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.9e-25 120.6 269 39.4
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.4e-25 120.2 254 39.4
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 2.4e-25 120.2 252 38.1
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 5.4e-25 119.0 265 39.2
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 7.0e-25 118.6 218 42.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 7.0e-25 118.6 241 36.9
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.2e-25 118.2 266 37.2
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.2e-24 117.9 241 36.9
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 1.6e-24 117.5 248 38.7
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.7e-24 116.7 240 37.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 2.7e-24 116.7 214 41.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 3.5e-24 116.3 283 36.0
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.5e-24 116.3 310 33.9
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 4.6e-24 115.9 244 37.3
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.8e-24 115.2 253 40.3
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 7.8e-24 115.2 245 37.1
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.7e-23 114.0 236 37.3
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.0e-23 113.2 263 34.2
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 3.9e-23 112.8 238 37.4
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 3.9e-23 112.8 244 36.9
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.0e-23 112.5 257 36.2
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 6.6e-23 112.1 268 36.9
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.9e-22 110.5 247 36.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.3e-22 109.4 255 38.8
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 4.3e-22 109.4 241 40.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 9.5e-22 108.2 253 37.9
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 9.5e-22 108.2 256 37.1
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 9.5e-22 108.2 253 37.9
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.2e-21 107.8 243 39.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.6e-21 107.5 266 34.6
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 1.6e-21 107.5 250 37.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.2e-21 105.5 136 47.1
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 6.2e-21 105.5 250 36.4
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.1e-21 105.1 266 35.0
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 8.1e-21 105.1 260 38.1
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.1e-20 104.8 232 37.5
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.4e-20 104.4 244 35.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.8e-20 104.0 265 34.7
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.8e-20 104.0 265 34.7
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 3.1e-20 103.2 256 34.0
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.2e-20 102.4 227 37.4
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.2e-20 102.4 242 36.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 8.9e-20 101.7 177 42.9
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.2e-19 101.3 278 34.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.2e-19 101.3 243 35.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.2e-19 101.3 256 36.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 1.5e-19 100.9 282 33.3
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 3.4e-19 99.8 328 29.9
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.8e-19 99.0 154 46.1
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 5.8e-19 99.0 251 35.1
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.7e-18 97.4 152 44.7
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.9e-18 96.7 241 34.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 4.9e-18 95.9 288 32.3
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 6.4e-18 95.5 288 30.9
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.1e-17 94.7 146 43.2
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.9e-17 94.0 249 35.3
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.5e-16 89.7 250 34.0
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 3.5e-16 89.7 287 32.4
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.3e-15 87.8 268 31.3
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.7e-15 87.4 223 39.5
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-15 87.4 223 39.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.7e-15 87.4 141 39.7
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.7e-15 87.4 227 33.9
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-15 87.0 217 39.6
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.0e-15 86.7 218 40.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.0e-15 86.7 245 32.7
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.1e-15 85.9 290 30.3
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.1e-14 84.7 283 29.7
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.5e-14 84.3 227 33.0
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 3.3e-14 83.2 146 37.0
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-14 83.2 225 33.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 9.5e-14 81.6 161 37.9
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.6e-13 80.9 227 37.0
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.8e-12 77.4 238 31.1
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 2.3e-12 77.0 141 36.9
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.5e-11 74.3 201 30.8
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 7.6e-11 72.0 104 46.2
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 6.4e-10 68.9 315 29.2
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.2e-09 66.6 130 41.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.2e-09 66.6 182 35.2
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 5.4e-09 65.9 150 38.7
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.6e-08 64.3 262 30.2
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 2.7e-08 63.5 168 32.1
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 1.0e-07 61.6 191 32.5
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.9e-06 57.4 152 32.2


User provided reference genes

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