Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0639 Punica granatum HOM05D007411 ORTHO05D009025 1.2e-113 413.3 234 100.0
CiPaw.01G198400 Carya illinoinensis HOM05D007411 ORTHO05D009025 1.8e-24 117.1 196 40.8
QL06p001698 Quercus lobata HOM05D007411 ORTHO05D009025 1.8e-24 117.1 148 45.3
Cfa008473 Carpinus fangiana HOM05D007411 ORTHO05D009025 9.1e-24 114.8 102 55.9
Prupe.1G017200 Prunus persica HOM05D007411 ORTHO05D009025 3.5e-23 112.8 161 42.9
Dinv14014 Davidia involucrata HOM05D007411 ORTHO05D009025 4.5e-23 112.5 104 54.8
BolC6t36888H Brassica oleracea HOM05D007411 ORTHO05D009025 1.7e-22 110.5 199 40.7
CsaV3_7G022390 Cucumis sativus L. HOM05D007411 ORTHO05D009025 1.7e-22 110.5 155 43.2
MD13G1196400 Malus domestica HOM05D007411 ORTHO05D009025 3.8e-22 109.4 95 54.7
MD16G1196900 Malus domestica HOM05D007411 ORTHO05D009025 6.5e-22 108.6 94 53.2
MELO3C012663.2 Cucumis melo HOM05D007411 ORTHO05D009025 8.5e-22 108.2 153 43.8
C06p16920 Brassica napus HOM05D007411 ORTHO05D009025 1.5e-21 107.5 200 41.0
Ciclev10006648m.g Citrus clementina HOM05D007411 ORTHO05D009025 2.5e-21 106.7 106 52.8
Actinidia23528 Actinidia chinensis HOM05D007411 ORTHO05D009025 3.2e-21 106.3 167 40.7
ClCG06G006330 Citrullus lanatus HOM05D007411 ORTHO05D009025 5.5e-21 105.5 149 45.6
BraA05t20476Z Brassica rapa HOM05D007411 ORTHO05D009025 7.2e-21 105.1 163 41.1
CSS0014995 Camellia sinensis var. sinensis HOM05D007411 ORTHO05D009025 7.2e-21 105.1 91 53.8
Sed0024167 Sechium edule HOM05D007411 ORTHO05D009025 7.2e-21 105.1 105 51.4
A05p15610 Brassica napus HOM05D007411 ORTHO05D009025 1.2e-20 104.4 163 40.5
AT4G14805 Arabidopsis thaliana HOM05D007411 ORTHO05D009025 1.6e-20 104.0 169 39.6
arahy.Tifrunner.gnm1.ann1.SC2WWN Arachis hypogaea HOM05D007411 ORTHO05D009025 1.6e-20 104.0 101 52.5
Hma1.2p1_1572F.1_g291440 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.6e-20 104.0 134 44.0
Hma1.2p1_2201F.1_g317040 Hydrangea macrophylla HOM05D007411 ORTHO05D009025 1.6e-20 104.0 134 44.0
FvH4_4g15980 Fragaria vesca HOM05D007411 ORTHO05D009025 2.1e-20 103.6 100 49.0
CARHR221360 Cardamine hirsuta HOM05D007411 ORTHO05D009025 2.7e-20 103.2 208 36.1
arahy.Tifrunner.gnm1.ann1.UE7NK8 Arachis hypogaea HOM05D007411 ORTHO05D009025 4.7e-20 102.4 132 45.5
BcaB02g07857 Brassica carinata HOM05D007411 ORTHO05D009025 4.7e-20 102.4 209 38.3
BcaC08g44271 Brassica carinata HOM05D007411 ORTHO05D009025 4.7e-20 102.4 154 42.2
Eucgr.H03438 Eucalyptus grandis HOM05D007411 ORTHO05D009025 6.1e-20 102.1 94 57.4
BcaB04g18262 Brassica carinata HOM05D007411 ORTHO05D009025 8.0e-20 101.7 149 42.3
A05p16750 Brassica napus HOM05D007411 ORTHO05D009025 8.0e-20 101.7 166 38.6
Gohir.D09G219700 Gossypium hirsutum HOM05D007411 ORTHO05D009025 8.0e-20 101.7 177 39.0
ECA236G4939 Erigeron canadensis HOM05D007411 ORTHO05D009025 1.0e-19 101.3 169 37.3
Ca_24421_v3 Cicer arietinum L. HOM05D007411 ORTHO05D009025 1.4e-19 100.9 102 52.9
Sp7g12940 Schrenkiella parvula HOM05D007411 ORTHO05D009025 1.4e-19 100.9 103 48.5
BcaC02g11603 Brassica carinata HOM05D007411 ORTHO05D009025 1.8e-19 100.5 164 38.4
C04p13410 Brassica napus HOM05D007411 ORTHO05D009025 1.8e-19 100.5 164 38.4
Gorai.006G240700 Gossypium raimondii HOM05D007411 ORTHO05D009025 1.8e-19 100.5 177 39.0
HanXRQChr05g0131941 Helianthus annuus HOM05D007411 ORTHO05D009025 1.8e-19 100.5 101 50.5
Sopen09g031190 Solanum pennellii HOM05D007411 ORTHO05D009025 1.8e-19 100.5 101 46.5
Cpa.g.sc58.79 Carica papaya HOM05D007411 ORTHO05D009025 4.0e-19 99.4 123 42.3
SGA_v2.0_scaffold151G36714 Striga asiatica HOM05D007411 ORTHO05D009025 4.0e-19 99.4 164 40.9
A08p11480 Brassica napus HOM05D007411 ORTHO05D009025 5.2e-19 99.0 103 48.5
BraA08t33142Z Brassica rapa HOM05D007411 ORTHO05D009025 5.2e-19 99.0 103 48.5
FAN22G0418 Fragaria x ananassa HOM05D007411 ORTHO05D009025 5.2e-19 99.0 170 37.6
Nn6g34119 Nelumbo nucifera HOM05D007411 ORTHO05D009025 5.2e-19 99.0 154 40.9
TWI09G1055 Tripterygium wilfordii HOM05D007411 ORTHO05D009025 5.2e-19 99.0 208 36.5
BraA05t20579Z Brassica rapa HOM05D007411 ORTHO05D009025 6.8e-19 98.6 163 39.9
FAN17G1166 Fragaria x ananassa HOM05D007411 ORTHO05D009025 6.8e-19 98.6 161 38.5
BcaC07g37855 Brassica carinata HOM05D007411 ORTHO05D009025 8.8e-19 98.2 103 48.5
BolC8t48245H Brassica oleracea HOM05D007411 ORTHO05D009025 8.8e-19 98.2 103 48.5
FAN07G0509 Fragaria x ananassa HOM05D007411 ORTHO05D009025 8.8e-19 98.2 174 38.5
Solyc09g082310.2 Solanum lycopersicum HOM05D007411 ORTHO05D009025 8.8e-19 98.2 101 45.5
AL7G41060 Arabidopsis lyrata HOM05D007411 ORTHO05D009025 2.0e-18 97.1 198 35.4
FAN12G4330 Fragaria x ananassa HOM05D007411 ORTHO05D009025 2.0e-18 97.1 168 34.5
Gohir.A09G217300 Gossypium hirsutum HOM05D007411 ORTHO05D009025 2.0e-18 97.1 177 38.4
Lsat_1_v5_gn_9_80381 Lactuca sativa HOM05D007411 ORTHO05D009025 2.0e-18 97.1 120 45.0
THA.LOC104808560 Tarenaya hassleriana HOM05D007411 ORTHO05D009025 2.6e-18 96.7 148 39.9
Duzib151G0508 Durio zibethinus HOM05D007411 ORTHO05D009025 4.4e-18 95.9 123 40.7
LjContig00222g0000468 Lotus japonicus HOM05D007411 ORTHO05D009025 9.8e-18 94.7 101 49.5
Thhalv10027383m.g Eutrema salsugineum HOM05D007411 ORTHO05D009025 1.7e-17 94.0 158 38.0
Migut.G00360 Erythranthe guttata HOM05D007411 ORTHO05D009025 2.2e-17 93.6 104 44.2
DCAR_027228 Daucus carota HOM05D002080 ORTHO05D002062 4.8e-17 92.4 92 46.7
Psat2g190000 Pisum sativum HOM05D007411 ORTHO05D009025 1.4e-16 90.9 147 41.5
Manes.03G176101 Manihot esculenta HOM05D007411 ORTHO05D009025 1.8e-16 90.5 154 40.9
Sc13g0004560 Simmondsia chinensis HOM05D007411 ORTHO05D009025 1.8e-16 90.5 148 37.8
TAR633G2267 Trochodendron aralioides HOM05D007411 ORTHO05D009025 4.1e-16 89.4 93 48.4
CAN.G1094.25 Capsicum annuum HOM05D007411 ORTHO05D009025 5.4e-16 89.0 102 42.2
Nitab4.5_0002307g0080 Nicotiana tabacum HOM05D007411 ORTHO05D009025 7.0e-16 88.6 230 33.9
SalBow2G3064 Salvia bowleyana HOM05D007411 ORTHO05D009025 7.0e-16 88.6 175 34.9
Potri.010G085000 Populus trichocarpa HOM05D007411 ORTHO05D009025 9.1e-16 88.2 210 34.3
RcHm_v2.0_Chr4g0415591 Rosa chinensis HOM05D007411 ORTHO05D009025 9.1e-16 88.2 94 46.8
CANSAT78G1457 Cannabis sativa HOM05D007411 ORTHO05D009025 1.2e-15 87.8 179 36.3
Medtr5g006900 Medicago truncatula HOM05D007411 ORTHO05D009025 1.2e-15 87.8 149 39.6
Thecc.04G235100 Theobroma cacao HOM05D007411 ORTHO05D009025 1.6e-15 87.4 112 42.0
Nitab4.5_0004062g0070 Nicotiana tabacum HOM05D007411 ORTHO05D009025 3.5e-15 86.3 194 30.4
Glyma.01G235100 Glycine max HOM05D007411 ORTHO05D009025 4.5e-15 85.9 101 50.5
Medtr2g049980 Medicago truncatula HOM05D007411 ORTHO05D009025 5.9e-15 85.5 145 40.0
Aqoxy5G00439 Aquilegia oxysepala HOM05D007411 ORTHO05D009025 7.7e-15 85.1 148 39.2
LjContig00222g0003473 Lotus japonicus HOM05D007411 ORTHO05D009025 1.0e-14 84.7 92 50.0
COL.COLO4_21515 Corchorus olitorius HOM05D007411 ORTHO05D009025 1.3e-14 84.3 73 49.3
Atru.chr4.2432 Acer truncatum HOM05D007411 ORTHO05D009025 1.7e-14 84.0 91 46.2
RcHm_v2.0_Chr4g0391821 Rosa chinensis HOM05D007411 ORTHO05D009025 2.3e-14 83.6 94 43.6
Carub.0007s2732 Capsella rubella HOM05D007411 ORTHO05D009025 2.9e-14 83.2 181 34.3
Peaxi162Scf00092g00336 Petunia axillaris HOM05D007411 ORTHO05D009025 6.5e-14 82.0 91 41.8
Lalb_Chr05g0211151 Lupinus albus HOM05D007411 ORTHO05D009025 8.6e-14 81.6 98 44.9
PSO210G5563 Papaver somniferum HOM05D007411 ORTHO05D009025 1.9e-13 80.5 122 44.3
Phvul.002G042700 Phaseolus vulgaris HOM05D007411 ORTHO05D009025 2.5e-13 80.1 109 45.0
PSO832G1886 Papaver somniferum HOM05D007411 ORTHO05D009025 3.2e-13 79.7 122 44.3
VMungo1215G0970 Vigna mungo HOM05D007411 ORTHO05D009025 7.2e-13 78.6 103 44.7
CDE05G0749 Ceratophyllum demersum HOM05D007411 ORTHO05D009025 2.1e-12 77.0 142 38.0
TPR.G3913 Trifolium pratense HOM05D007411 ORTHO05D009025 3.6e-12 76.3 89 48.3
MBI11_g32995_MAGBIO Magnolia biondii HOM05D007411 ORTHO05D009025 4.7e-12 75.9 133 35.3
Potri.008G155300 Populus trichocarpa HOM05D007411 ORTHO05D009025 8.8e-11 71.6 125 40.8
Psat7g023320 Pisum sativum HOM05D007411 ORTHO05D009025 1.2e-10 71.2 135 38.5
PSO724G0575 Papaver somniferum HOM05D007411 ORTHO05D009025 1.3e-09 67.8 104 40.4
Os01g0607100 Oryza sativa ssp. japonica HOM05D032292 ORTHO05D009025 6.6e-06 55.5 159 32.1


User provided reference genes

Program Settings