Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0563 Punica granatum HOM05D003856 ORTHO05D004547 2.3e-134 482.3 247 100.0
Lj2A261T38 Lonicera japonica HOM05D003856 ORTHO05D004547 7.1e-128 460.7 245 94.7
Cfa010272 Carpinus fangiana HOM05D003856 ORTHO05D004547 6.1e-127 457.6 245 93.5
Thecc.06G233900 Theobroma cacao HOM05D003856 ORTHO05D004547 6.1e-127 457.6 247 93.9
Actinidia02310 Actinidia chinensis HOM05D003856 ORTHO05D004547 1.8e-126 456.1 245 93.9
Haze_06930 Corylus avellana HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 93.5
Dinv07408 Davidia involucrata HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 93.5
TAR627G0499 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 93.5
TAR627G1166 Trochodendron aralioides HOM05D003856 ORTHO05D004547 2.3e-126 455.7 245 93.5
Eucgr.D01412 Eucalyptus grandis HOM05D003856 ORTHO05D004547 3.9e-126 454.9 247 91.9
SalBow8G1854 Salvia bowleyana HOM05D003856 ORTHO05D004547 3.9e-126 454.9 245 93.1
Cc09_g00840 Coffea canephora HOM05D003856 ORTHO05D004547 5.1e-126 454.5 246 93.9
Migut.M01400 Erythranthe guttata HOM05D003856 ORTHO05D004547 6.7e-126 454.1 245 93.5
Manes.08G069500 Manihot esculenta HOM05D003856 ORTHO05D004547 6.7e-126 454.1 245 93.5
SalBow1G0666 Salvia bowleyana HOM05D003856 ORTHO05D004547 6.7e-126 454.1 245 93.5
CiPaw.10G078300 Carya illinoinensis HOM05D003856 ORTHO05D004547 8.7e-126 453.8 247 92.3
MBI16_g31714_MAGBIO Magnolia biondii HOM05D003856 ORTHO05D004547 1.1e-125 453.4 247 92.7
Aqoxy1G04060 Aquilegia oxysepala HOM05D003856 ORTHO05D004547 1.5e-125 453.0 245 92.7
CiPaw.09G102800 Carya illinoinensis HOM05D003856 ORTHO05D004547 1.5e-125 453.0 247 91.9
Hma1.2p1_0657F.1_g197110 Hydrangea macrophylla HOM05D003856 ORTHO05D004547 2.5e-125 452.2 245 93.1
Duzib192G0794 Durio zibethinus HOM05D003856 ORTHO05D004547 3.3e-125 451.8 247 92.7
Nitab4.5_0004406g0030 Nicotiana tabacum HOM05D003856 ORTHO05D004547 4.3e-125 451.4 245 92.7
RcHm_v2.0_Chr5g0001451 Rosa chinensis HOM05D003856 ORTHO05D004547 5.7e-125 451.1 247 91.5
Actinidia26855 Actinidia chinensis HOM05D003856 ORTHO05D004547 7.4e-125 450.7 245 93.1
Duzib235G1167 Durio zibethinus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 247 92.3
HanXRQChr01g0006771 Helianthus annuus HOM05D003856 ORTHO05D004547 9.7e-125 450.3 243 93.0
QL05p069616 Quercus lobata HOM05D003856 ORTHO05D004547 9.7e-125 450.3 245 92.7
FAN25G1896 Fragaria x ananassa HOM05D003856 ORTHO05D004547 1.3e-124 449.9 247 90.7
Lsat_1_v5_gn_4_61900 Lactuca sativa HOM05D003856 ORTHO05D004547 1.3e-124 449.9 245 91.8
Nn1g07399 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.3e-124 449.9 247 91.9
CSS0032798 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.6e-124 449.5 245 90.6
FvH4_3g00930 Fragaria vesca HOM05D003856 ORTHO05D004547 1.6e-124 449.5 245 91.0
Atru.chr1.2436 Acer truncatum HOM05D003856 ORTHO05D004547 2.2e-124 449.1 248 92.7
Atru.chr1.2438 Acer truncatum HOM05D003856 ORTHO05D004547 2.2e-124 449.1 248 92.7
CANSAT56G3590 Cannabis sativa HOM05D003856 ORTHO05D004547 2.8e-124 448.7 247 91.5
Gohir.D10G008700 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 92.7
Gorai.011G009500 Gossypium raimondii HOM05D003856 ORTHO05D004547 2.8e-124 448.7 245 92.7
Prupe.4G009900 Prunus persica HOM05D003856 ORTHO05D004547 3.7e-124 448.4 244 92.2
Sc17g0007760 Simmondsia chinensis HOM05D003856 ORTHO05D004547 3.7e-124 448.4 245 92.7
Gohir.D10G008800 Gossypium hirsutum HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 92.7
Gorai.011G009600 Gossypium raimondii HOM05D003856 ORTHO05D004547 6.3e-124 447.6 245 92.7
Cpa.g.sc75.112 Carica papaya HOM05D003856 ORTHO05D004547 8.2e-124 447.2 245 91.8
ECA248G1273 Erigeron canadensis HOM05D003856 ORTHO05D004547 8.2e-124 447.2 243 92.2
Gohir.A10G009100 Gossypium hirsutum HOM05D003856 ORTHO05D004547 1.1e-123 446.8 245 92.7
Sopen05g032590 Solanum pennellii HOM05D003856 ORTHO05D004547 1.1e-123 446.8 246 91.9
PGSC0003DMG400008443 Solanum tuberosum HOM05D003856 ORTHO05D004547 1.1e-123 446.8 246 91.9
MD05G1358200 Malus domestica HOM05D003856 ORTHO05D004547 1.4e-123 446.4 247 91.1
Hund06997 Selenicereus undatus HOM05D003856 ORTHO05D004547 1.4e-123 446.4 245 91.8
TAR626G0303 Trochodendron aralioides HOM05D003856 ORTHO05D004547 1.8e-123 446.0 245 91.0
Ciclev10016420m.g Citrus clementina HOM05D003856 ORTHO05D004547 2.4e-123 445.7 247 91.9
Gohir.A10G009000 Gossypium hirsutum HOM05D003856 ORTHO05D004547 2.4e-123 445.7 245 91.8
CAN.G449.18 Capsicum annuum HOM05D003856 ORTHO05D004547 3.1e-123 445.3 246 91.5
TWI38G2230 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 3.1e-123 445.3 246 91.9
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 4.1e-123 444.9 245 91.8
MD10G1332300 Malus domestica HOM05D003856 ORTHO05D004547 4.1e-123 444.9 247 90.7
SGA_v2.0_scaffold4G01871 Striga asiatica HOM05D003856 ORTHO05D004547 4.1e-123 444.9 244 91.0
HanXRQChr10g0285161 Helianthus annuus HOM05D003856 ORTHO05D004547 6.9e-123 444.1 243 90.9
Solyc05g054100.3 Solanum lycopersicum HOM05D003856 ORTHO05D004547 6.9e-123 444.1 246 91.5
BcaB03g11729 Brassica carinata HOM05D003856 ORTHO05D004547 9.0e-123 443.7 247 90.3
FAN21G0260 Fragaria x ananassa HOM05D003856 ORTHO05D004547 9.0e-123 443.7 252 88.9
Potri.016G013100 Populus trichocarpa HOM05D003856 ORTHO05D004547 9.0e-123 443.7 245 90.6
arahy.Tifrunner.gnm1.ann1.B5Z1I8 Arachis hypogaea HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.9
arahy.Tifrunner.gnm1.ann1.ZZ9Q5Y Arachis hypogaea HOM05D003856 ORTHO05D004547 1.5e-122 443.0 247 89.9
MSTRG.7166 Avicennia marina HOM05D003856 ORTHO05D004547 1.5e-122 443.0 245 90.2
Lsat_1_v5_gn_0_29081 Lactuca sativa HOM05D003856 ORTHO05D004547 1.5e-122 443.0 243 90.5
CsaV3_1G017260 Cucumis sativus L. HOM05D003856 ORTHO05D004547 2.0e-122 442.6 245 89.4
THA.LOC104813601 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 2.0e-122 442.6 247 90.7
arahy.Tifrunner.gnm1.ann1.D1JSNC Arachis hypogaea HOM05D003856 ORTHO05D004547 2.6e-122 442.2 247 89.5
arahy.Tifrunner.gnm1.ann1.GCV40F Arachis hypogaea HOM05D003856 ORTHO05D004547 3.4e-122 441.8 247 89.1
ClCG01G010160 Citrullus lanatus HOM05D003856 ORTHO05D004547 3.4e-122 441.8 245 89.4
Potri.006G011500 Populus trichocarpa HOM05D003856 ORTHO05D004547 7.7e-122 440.7 245 89.0
Ah.14g087610 Amaranthus hybridus HOM05D003856 ORTHO05D004547 1.0e-121 440.3 245 90.2
EL10Ac8g20193 Beta vulgaris HOM05D003856 ORTHO05D004547 1.3e-121 439.9 244 91.0
THA.LOC104812995 Tarenaya hassleriana HOM05D003856 ORTHO05D004547 1.7e-121 439.5 245 89.8
Glyma.08G331200 Glycine max HOM05D003856 ORTHO05D004547 2.2e-121 439.1 245 89.8
BcaC01g00774 Brassica carinata HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 89.5
A08p15680 Brassica napus HOM05D003856 ORTHO05D004547 2.9e-121 438.7 247 89.5
A09p26760 Brassica napus HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 90.2
C09p33910 Brassica napus HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 90.2
BolC9t56227H Brassica oleracea HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 90.2
BraA09t38248Z Brassica rapa HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 90.2
Sed0026067 Sechium edule HOM05D003856 ORTHO05D004547 3.8e-121 438.3 245 89.0
AT4G12590 Arabidopsis thaliana HOM05D003856 ORTHO05D004547 6.5e-121 437.6 245 89.0
C03p84130 Brassica napus HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 89.1
BolC3t20692H Brassica oleracea HOM05D003856 ORTHO05D004547 6.5e-121 437.6 247 89.1
Glyma.18G075400 Glycine max HOM05D003856 ORTHO05D004547 6.5e-121 437.6 244 89.8
BraA08t33548Z Brassica rapa HOM05D003856 ORTHO05D004547 8.5e-121 437.2 247 89.1
CDE04G3203 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 89.0
CDE06G2351 Ceratophyllum demersum HOM05D003856 ORTHO05D004547 1.1e-120 436.8 245 88.6
BcaC04g21245 Brassica carinata HOM05D003856 ORTHO05D004547 1.4e-120 436.4 245 89.8
Lj5g0025471 Lotus japonicus HOM05D003856 ORTHO05D004547 1.4e-120 436.4 247 88.3
AL6G47550 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 88.6
AL7G31210 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 88.7
C01p16660 Brassica napus HOM05D003856 ORTHO05D004547 1.9e-120 436.0 247 88.3
Sed0028227 Sechium edule HOM05D003856 ORTHO05D004547 1.9e-120 436.0 245 87.8
BcaB01g01755 Brassica carinata HOM05D003856 ORTHO05D004547 3.2e-120 435.3 245 89.4
Aa31LG9G10060 Aethionema arabicum HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.7
A01p13750 Brassica napus HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.3
BraA01t01320Z Brassica rapa HOM05D003856 ORTHO05D004547 4.2e-120 434.9 247 88.3
VMungo0540G0895 Vigna mungo HOM05D003856 ORTHO05D004547 4.2e-120 434.9 245 88.6
Thhalv10026090m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 7.2e-120 434.1 247 88.7
Phvul.006G059000 Phaseolus vulgaris HOM05D003856 ORTHO05D004547 1.6e-119 433.0 245 88.6
BolC1t01613H Brassica oleracea HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 87.9
Carub.0006s3186 Capsella rubella HOM05D003856 ORTHO05D004547 2.1e-119 432.6 245 87.8
Sp7g20520 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.1e-119 432.6 247 87.9
Ca_10008_v3 Cicer arietinum L. HOM05D003856 ORTHO05D004547 4.6e-119 431.4 246 87.8
Lalb_Chr06g0168331 Lupinus albus HOM05D003856 ORTHO05D004547 4.6e-119 431.4 247 87.4
Rhsim02G0099500 Rhododendron simsii HOM05D003856 ORTHO05D004547 4.6e-119 431.4 269 84.0
Nitab4.5_0001735g0170 Nicotiana tabacum HOM05D003856 ORTHO05D004547 6.1e-119 431.0 246 90.2
CARHR253580 Cardamine hirsuta HOM05D003856 ORTHO05D004547 1.0e-118 430.3 245 89.0
Nn1g03306 Nelumbo nucifera HOM05D003856 ORTHO05D004547 1.0e-118 430.3 235 92.3
unitig_61.g26092 Utricularia gibba HOM05D003856 ORTHO05D004547 1.8e-118 429.5 260 85.4
Lalb_Chr02g0149201 Lupinus albus HOM05D003856 ORTHO05D004547 3.0e-118 428.7 245 87.3
DCAR_027821 Daucus carota HOM05D003856 ORTHO05D004547 3.9e-118 428.3 284 79.9
CARHR229320 Cardamine hirsuta HOM05D003856 ORTHO05D004547 8.8e-118 427.2 248 87.5
Oeu009395.1 Olea europaea HOM05D003856 ORTHO05D004547 8.8e-118 427.2 304 75.0
Thhalv10028913m.g Eutrema salsugineum HOM05D003856 ORTHO05D004547 1.1e-117 426.8 245 87.8
Sp6g04920 Schrenkiella parvula HOM05D003856 ORTHO05D004547 2.5e-117 425.6 245 86.9
PSO541G3298 Papaver somniferum HOM05D003856 ORTHO05D004547 5.7e-117 424.5 246 87.4
TWI63G1684 Tripterygium wilfordii HOM05D003856 ORTHO05D004547 5.7e-117 424.5 290 78.3
BcaC09g51102 Brassica carinata HOM05D003856 ORTHO05D004547 7.4e-117 424.1 248 86.7
Psat6g143120 Pisum sativum HOM05D003856 ORTHO05D004547 9.7e-117 423.7 246 86.2
PSO675G7111 Papaver somniferum HOM05D003856 ORTHO05D004547 1.7e-116 422.9 246 87.0
Peaxi162Scf00990g00017 Petunia axillaris HOM05D003856 ORTHO05D004547 3.7e-116 421.8 247 87.9
Medtr1g079890 Medicago truncatula HOM05D003856 ORTHO05D004547 4.8e-116 421.4 246 85.4
TPR.G32278 Trifolium pratense HOM05D003856 ORTHO05D004547 6.9e-115 417.5 246 85.8
Mapoly0029s0061 Marchantia polymorpha HOM05D003856 ORTHO05D004547 4.2e-112 408.3 251 80.9
Zm00001eb102120 Zea mays HOM05D003856 ORTHO05D004547 6.1e-111 404.4 249 82.7
AagrBONN_evm.TU.Sc2ySwM_362.305 Anthoceros agrestis HOM05D003856 ORTHO05D004547 5.1e-110 401.4 245 81.6
Sabra06G0009100 Salix brachista HOM05D003856 ORTHO05D004547 1.1e-109 400.2 332 65.7
Haze_06937 Corylus avellana HOM05D003856 ORTHO05D004547 1.7e-108 396.4 264 79.2
GSVIVG01003331001 Vitis vinifera HOM05D003856 ORTHO05D004547 2.2e-108 396.0 209 94.3
GSVIVG01003337001 Vitis vinifera HOM05D003856 ORTHO05D004547 2.2e-108 396.0 209 94.3
Os09g0497400 Oryza sativa ssp. japonica HOM05D003856 ORTHO05D004547 3.7e-108 395.2 249 80.3
Pp3c11_24600 Physcomitrium patens HOM05D003856 ORTHO05D004547 6.3e-108 394.4 251 78.9
SMO239G0047 Selaginella moellendorffii HOM05D003856 ORTHO05D004547 1.4e-107 393.3 251 77.7
Pp3c7_950 Physcomitrium patens HOM05D003856 ORTHO05D004547 2.6e-106 389.0 251 76.9
Sabra16G0002300 Salix brachista HOM05D003856 ORTHO05D004547 3.5e-106 388.7 378 58.5
vmacro15762 Vaccinium macrocarpon HOM05D003856 ORTHO05D004547 1.5e-101 373.2 359 60.2
ATR0712G091 Amborella trichopoda HOM05D003856 ORTHO05D004547 2.6e-101 372.5 213 87.8
SHI24455 Sapria himalayana HOM05D003856 ORTHO05D004547 1.5e-93 346.7 245 73.5
Gorai.013G129800 Gossypium raimondii HOM05D003856 ORTHO05D004547 4.2e-88 328.6 245 72.7
Lj1C1240G8 Lonicera japonica HOM05D003856 ORTHO05D004547 1.2e-87 327.0 198 87.4
Nitab4.5_0003626g0020 Nicotiana tabacum HOM05D003856 ORTHO05D004547 2.3e-86 322.8 245 70.2
MELO3C021687.2 Cucumis melo HOM05D003856 ORTHO05D004547 2.0e-82 309.7 179 87.7
CSS0048239 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 1.7e-81 306.6 163 91.4
AUR62012797 Chenopodium quinoa HOM05D003856 ORTHO05D004547 4.2e-80 302.0 172 90.1
AUR62021855 Chenopodium quinoa HOM05D003856 ORTHO05D004547 9.5e-80 300.8 172 90.1
Lalb_Chr21g0311231 Lupinus albus HOM05D003856 ORTHO05D004547 2.6e-77 292.7 167 85.0
HPP92_000415 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.9e-74 281.6 278 57.2
MCO07G661 Micromonas commoda HOM05D003856 ORTHO05D004547 3.7e-60 235.7 241 48.5
SEGI_40422 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.6e-58 230.3 138 84.1
Haze_26609 Corylus avellana HOM05D003856 ORTHO05D004547 3.0e-49 199.5 232 44.8
Gorai.012G047500 Gossypium raimondii HOM05D003856 ORTHO05D004547 3.6e-47 192.6 245 51.0
Cre09.g400400 Chlamydomonas reinhardtii HOM05D003856 ORTHO05D004547 1.8e-46 190.3 246 43.5
MD10G1332200 Malus domestica HOM05D003856 ORTHO05D004547 3.4e-45 186.0 102 90.2
SEGI_31097 Sequoiadendron giganteum HOM05D003856 ORTHO05D004547 1.3e-41 174.1 94 89.4
Carub.0007s1888 Capsella rubella HOM05D003856 ORTHO05D004547 1.8e-38 163.7 199 54.3
CSS0021523 Camellia sinensis var. sinensis HOM05D003856 ORTHO05D004547 9.9e-37 157.9 163 55.2
COL.COLO4_31891 Corchorus olitorius HOM05D003856 ORTHO05D004547 3.1e-30 136.3 141 55.3
Lalb_Chr21g0311241 Lupinus albus HOM05D003856 ORTHO05D004547 2.9e-28 129.8 82 79.3
C01p16690 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-26 124.0 84 72.6
AL649U10020 Arabidopsis lyrata HOM05D003856 ORTHO05D004547 3.5e-26 122.9 82 79.3
CARHR290760 Cardamine hirsuta HOM05D003856 ORTHO05D004547 2.3e-25 120.2 83 73.5
PRCOL_00006309 Prasinoderma coloniale HOM05D003856 ORTHO05D004547 1.1e-24 117.9 232 35.8
Carub.0008s0836 Capsella rubella HOM05D003856 ORTHO05D004547 1.8e-22 110.5 166 45.8
CBR_g38137 Chara braunii HOM05D003856 ORTHO05D004547 1.4e-19 100.9 99 48.5
COL.COLO4_31890 Corchorus olitorius HOM05D003856 ORTHO05D004547 1.9e-16 90.5 53 90.6
Migut.L00276 Erythranthe guttata HOM05D003856 ORTHO05D004547 9.6e-16 88.2 51 84.3
vmacro04321 Vaccinium macrocarpon HOM05D004428 ORTHO05D013648 3.1e-14 83.2 74 64.9
Oeu040759.1 Olea europaea HOM05D003856 ORTHO05D004547 5.3e-14 82.4 52 88.5
Hund21152 Selenicereus undatus HOM05D003856 ORTHO05D004547 5.3e-14 82.4 46 80.4
HPP92_000455 Vanilla planifolia HOM05D003856 ORTHO05D004547 5.3e-14 82.4 51 84.3
Dinv13969 Davidia involucrata HOM05D003856 ORTHO05D004547 6.5e-12 75.5 79 58.2
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.2e-11 72.0 38 86.8
Rhsim07G0218800 Rhododendron simsii HOM05D003856 ORTHO05D013648 2.1e-10 70.5 90 53.3
vmacro16921 Vaccinium macrocarpon HOM05D000007 ORTHO05D013648 2.1e-10 70.5 106 49.1
FAN07G2353 Fragaria x ananassa HOM05D003856 ORTHO05D004547 3.9e-09 66.2 44 81.8
vmacro22601 Vaccinium macrocarpon HOM05D003856 ORTHO05D426869 7.4e-08 62.0 90 50.0
A05p11440 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-07 60.8 36 75.0
C04p14930 Brassica napus HOM05D003856 ORTHO05D004547 1.6e-07 60.8 36 75.0
BraA05t20093Z Brassica rapa HOM05D003856 ORTHO05D004547 1.6e-07 60.8 36 75.0
Rhsim07G0218900 Rhododendron simsii HOM05D003856 ORTHO05D013648 1.6e-07 60.8 98 45.9


User provided reference genes

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