Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 2.1e-305 1051.6 535 100.0
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 2.9e-182 642.5 510 65.5
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 4.9e-182 641.7 510 64.7
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 9.2e-181 637.5 511 64.4
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.7e-179 633.3 489 65.4
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 2.1e-177 626.3 484 66.5
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 2.8e-177 625.9 476 67.0
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 2.4e-176 622.9 510 62.5
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 2.6e-175 619.4 480 65.8
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 9.9e-175 617.5 515 62.5
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 3.8e-174 615.5 490 64.9
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 1.1e-173 614.0 462 66.2
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 1.5e-170 603.6 478 64.9
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 2.4e-168 596.3 499 61.1
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 1.7e-166 590.1 486 62.1
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 6.4e-166 588.2 486 61.9
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 4.6e-164 582.0 478 60.9
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 3.4e-159 565.8 461 62.5
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 9.9e-159 564.3 562 55.0
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 9.3e-157 557.8 503 58.8
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 3.5e-156 555.8 503 59.8
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 1.4e-152 543.9 482 60.0
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 9.0e-152 541.2 480 58.8
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 2.0e-151 540.0 481 59.0
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 5.5e-149 531.9 482 57.3
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 9.7e-138 494.6 370 65.4
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 1.7e-137 493.8 484 56.2
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 2.6e-135 486.5 480 56.0
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 3.4e-135 486.1 381 64.8
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 2.0e-130 470.3 470 50.6
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 7.4e-130 468.4 470 50.2
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 1.4e-125 454.1 471 51.0
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 9.4e-125 451.4 516 48.3
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 2.7e-124 449.9 524 49.4
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 1.9e-117 427.2 524 47.7
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 2.2e-113 413.7 442 48.9
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 7.0e-112 408.7 406 55.2
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 8.8e-107 391.7 351 60.4
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 4.7e-100 369.4 316 58.5
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 8.9e-91 338.6 267 64.0
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.4e-88 330.5 510 40.8
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 2.4e-56 224.2 182 61.5
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 1.5e-50 204.9 671 27.1
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 2.6e-50 204.1 224 46.9
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 2.1e-47 194.5 158 59.5
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 9.0e-35 152.5 127 69.3
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 3.4e-26 124.0 96 64.6
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 3.1e-19 100.9 75 64.0
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 9.1e-19 99.4 100 50.0
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 2.2e-17 94.7 65 66.2
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 1.2e-15 89.0 60 66.7
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 2.8e-12 77.8 63 57.1
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-10 72.4 92 47.8
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 1.6e-07 62.0 61 49.2
HPP92_014728 Vanilla planifolia HOM05D005554 ORTHO05D007823 3.0e-06 57.8 298 22.1
Pp3c23_15810 Physcomitrium patens HOM05D005554 ORTHO05D007823 5.2e-06 57.0 295 22.0


User provided reference genes

Program Settings