Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.8e-290 1001.9 510 100.0
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 1.8e-194 682.9 511 66.3
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 4.1e-194 681.8 525 66.1
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 5.9e-193 677.9 510 66.5
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 8.5e-192 674.1 511 66.3
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 2.6e-188 662.5 511 64.4
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 2.6e-185 652.5 510 63.3
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 7.7e-185 651.0 552 60.3
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.7e-184 649.8 512 65.0
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.8e-184 648.7 511 64.6
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.5e-184 647.9 512 63.3
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 2.1e-182 642.9 511 63.2
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 2.1e-182 642.9 511 65.2
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 4.7e-182 641.7 511 64.0
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.0e-181 638.6 511 63.4
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 6.7e-181 637.9 510 62.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 6.7e-181 637.9 513 63.2
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 7.5e-180 634.4 514 62.8
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 7.5e-180 634.4 511 63.2
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 2.8e-179 632.5 529 62.0
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 2.8e-179 632.5 511 61.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 3.7e-179 632.1 510 61.2
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 8.2e-179 630.9 511 61.6
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.1e-178 630.6 511 62.2
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.8e-178 629.8 549 58.5
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.1e-178 629.0 511 61.3
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 7.0e-178 627.9 512 62.7
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 1.2e-177 627.1 511 62.6
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 6.5e-176 621.3 522 60.3
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.1e-175 620.5 514 60.1
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.9e-175 619.8 511 61.6
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 3.2e-175 619.0 511 61.3
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 5.5e-175 618.2 511 61.1
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.7e-174 615.9 511 61.3
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 2.7e-174 615.9 511 60.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 3.6e-174 615.5 511 60.9
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 4.7e-174 615.1 512 58.0
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.5e-172 610.1 511 59.1
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.0e-172 609.8 510 60.2
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 3.4e-172 609.0 516 61.4
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 5.7e-172 608.2 517 60.2
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 9.8e-172 607.4 512 61.1
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 9.8e-172 607.4 512 59.4
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 9.8e-172 607.4 511 59.1
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.7e-171 606.7 511 59.7
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 2.2e-171 606.3 511 60.7
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 8.3e-171 604.4 511 60.3
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.1e-170 604.0 511 58.9
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.8e-170 603.2 512 58.8
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 2.4e-170 602.8 511 60.5
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.1e-170 602.4 511 60.3
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 9.1e-170 600.9 511 60.1
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.5e-169 598.6 542 58.3
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.5e-167 592.8 513 58.5
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 3.2e-167 592.4 517 58.4
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 5.5e-167 591.7 511 60.9
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 1.6e-166 590.1 510 59.2
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 1.6e-166 590.1 511 59.3
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 3.6e-166 589.0 513 58.1
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.7e-166 588.6 514 59.1
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 4.7e-166 588.6 520 58.5
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 2.3e-165 586.3 520 58.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.9e-165 584.3 521 59.5
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.2e-164 583.9 514 58.4
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 2.6e-164 582.8 516 57.9
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 3.4e-164 582.4 510 57.5
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 7.5e-164 581.3 514 57.6
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 3.7e-163 578.9 516 57.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 4.9e-163 578.6 510 57.8
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 4.9e-163 578.6 510 57.8
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 6.3e-163 578.2 514 57.4
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 6.3e-163 578.2 485 60.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 8.3e-163 577.8 494 60.5
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 8.3e-163 577.8 554 56.3
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.4e-162 577.0 510 57.6
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 2.4e-162 576.2 522 56.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 7.0e-162 574.7 514 57.4
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.2e-161 573.9 498 58.2
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 5.9e-161 571.6 516 56.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 2.9e-160 569.3 508 56.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 4.4e-156 555.4 510 56.1
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 9.8e-156 554.3 460 61.1
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 4.6e-153 545.4 584 51.2
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 4.6e-153 545.4 465 60.9
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.7e-152 543.5 426 65.3
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.1e-151 540.8 510 56.1
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 9.5e-151 537.7 451 58.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 4.7e-150 535.4 536 53.5
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 5.2e-149 531.9 437 62.5
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.9e-149 531.2 591 50.3
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 7.5e-148 528.1 513 52.4
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.4e-146 523.9 483 56.5
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.6e-143 511.9 531 52.7
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.8e-137 491.5 511 52.1
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.0e-128 464.5 459 53.6
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 1.1e-127 461.1 521 47.0
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.2e-126 457.6 386 59.8
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.3e-123 447.6 376 62.2
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.6e-121 440.7 472 48.5
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 2.2e-115 420.2 340 63.2
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 6.4e-107 392.1 524 41.4
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 7.6e-100 368.6 325 59.4
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 3.8e-99 366.3 387 51.2
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 4.2e-98 362.8 529 40.6
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.5e-92 344.4 384 49.7
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 6.5e-91 339.0 424 46.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 5.5e-82 309.3 343 46.9
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.0e-80 305.1 364 47.8
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.5e-75 285.8 257 58.0
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 5.5e-74 282.7 445 37.8
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.8e-70 270.4 323 47.7
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 2.0e-68 264.2 431 40.6
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 4.2e-66 256.5 196 63.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 6.7e-64 249.2 386 41.5
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.4e-61 241.5 355 40.6
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.1e-58 231.9 535 32.1
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.2e-57 228.4 183 63.9
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.3e-43 181.8 136 62.5
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 7.5e-39 166.0 135 59.3
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-35 155.2 116 67.2
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-35 155.2 116 67.2
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.7e-35 154.8 504 27.2
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.9e-32 142.5 193 43.0
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.0e-23 114.8 116 50.9
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 2.2e-22 111.3 222 36.5
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 2.4e-21 107.8 60 78.3
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.3e-19 101.3 57 77.2
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.6e-17 95.1 52 76.9
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 4.7e-17 93.6 62 61.3
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.2e-17 93.2 65 67.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 8.1e-17 92.8 62 69.4
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 8.1e-17 92.8 62 69.4
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 1.3e-14 85.5 65 61.5
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 1.8e-08 65.1 101 36.6


User provided reference genes

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