Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 3.5e-219 764.6 374 100.0
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 1.7e-104 383.6 362 58.6
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 1.6e-102 377.1 336 58.9
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 4.6e-102 375.6 324 61.1
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 1.7e-101 373.6 321 60.1
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 3.0e-101 372.9 318 60.4
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 6.6e-101 371.7 372 54.8
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 6.6e-101 371.7 372 54.8
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 1.1e-100 370.9 388 54.4
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 1.9e-100 370.2 321 60.7
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 2.5e-100 369.8 326 59.2
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 4.7e-99 365.5 336 57.7
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 5.2e-98 362.1 321 58.3
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 6.8e-98 361.7 318 58.8
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 2.6e-97 359.8 318 58.2
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 4.9e-96 355.5 380 51.1
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 1.1e-95 354.4 296 63.2
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 2.4e-95 353.2 316 58.5
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 5.4e-95 352.1 317 56.2
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 4.6e-94 349.0 317 57.7
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 1.0e-93 347.8 317 55.5
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 3.3e-92 342.8 317 57.1
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 7.3e-92 341.7 321 56.4
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 6.2e-91 338.6 318 56.3
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 6.9e-90 335.1 322 56.5
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 2.0e-89 333.6 324 56.5
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 2.9e-88 329.7 283 60.1
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 8.4e-88 328.2 312 55.1
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.9e-87 327.0 252 65.1
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 3.4e-81 306.2 241 66.0
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 8.4e-80 301.6 241 64.3
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 3.7e-75 286.2 295 52.5
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 4.0e-74 282.7 308 49.0
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 2.0e-73 280.4 309 47.2
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 1.7e-72 277.3 314 48.4
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 2.7e-70 270.0 309 48.2
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 1.1e-68 264.6 321 46.7
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.5e-68 263.5 240 57.5
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 2.1e-67 260.4 309 45.3
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.8e-66 257.3 224 59.4
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 8.2e-51 205.3 253 46.2
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 2.5e-47 193.7 157 59.9
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 3.6e-46 189.9 160 58.1
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 2.8e-43 180.3 150 60.0
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 2.0e-41 174.1 166 56.0
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.0e-40 171.8 137 65.7
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 9.4e-39 165.2 138 61.6
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 2.6e-36 157.1 154 50.6
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 2.1e-30 137.5 82 74.4
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.0e-29 135.2 186 45.2
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 5.2e-29 132.9 115 62.6
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 9.7e-28 128.6 104 64.4
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 4.5e-25 119.8 95 63.2
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 3.8e-24 116.7 148 46.6
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.4e-23 112.1 100 59.0
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 1.5e-07 61.6 53 54.7
Potri.017G115002 Populus trichocarpa HOM05D008372 ORTHO05D010559 4.7e-06 56.6 62 53.2


User provided reference genes

Program Settings