Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os12g0465800 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D049646 3.6e-36 155.6 182 100.0
Zm00001eb132960 Zea mays HOM05D004645 ORTHO05D049646 8.7e-22 107.8 117 94.9
Os12g0465700 Oryza sativa ssp. japonica HOM05D004645 ORTHO05D005693 9.0e-19 97.8 120 53.3
CiPaw.05G212200 Carya illinoinensis HOM05D004645 ORTHO05D005693 2.1e-07 60.1 110 54.5
Psat0s904g0040 Pisum sativum HOM05D004645 ORTHO05D005693 2.1e-07 60.1 114 40.4
Psat7g154680 Pisum sativum HOM05D004645 ORTHO05D005693 2.1e-07 60.1 114 40.4
Lj1g0014871 Lotus japonicus HOM05D004645 ORTHO05D005693 2.7e-07 59.7 110 56.4
PSO782G2658 Papaver somniferum HOM05D004645 ORTHO05D005693 2.7e-07 59.7 111 74.8
PSO063G6220 Papaver somniferum HOM05D004645 ORTHO05D005693 3.5e-07 59.3 111 73.0
Glyma.09G223000 Glycine max HOM05D004645 ORTHO05D005693 4.6e-07 58.9 110 59.1
Glyma.12G014000 Glycine max HOM05D004645 ORTHO05D005693 4.6e-07 58.9 110 57.3
HanXRQChr11g0333681 Helianthus annuus HOM05D004645 ORTHO05D005693 4.6e-07 58.9 113 36.3
Phvul.011G016900 Phaseolus vulgaris HOM05D004645 ORTHO05D005693 4.6e-07 58.9 110 60.0
TPR.G9835 Trifolium pratense HOM05D004645 ORTHO05D005693 4.6e-07 58.9 110 65.5
VMungo1127G1262 Vigna mungo HOM05D004645 ORTHO05D005693 4.6e-07 58.9 110 59.1
FAN03G2055 Fragaria x ananassa HOM05D004645 ORTHO05D005693 6.0e-07 58.5 122 68.9
Lj5g0009502 Lotus japonicus HOM05D004645 ORTHO05D005693 1.3e-06 57.4 110 66.4
Haze_00364 Corylus avellana HOM05D004645 ORTHO05D005693 1.8e-06 57.0 114 77.2
FAN01G2860 Fragaria x ananassa HOM05D004645 ORTHO05D005693 1.8e-06 57.0 113 63.7
CiPaw.06G036400 Carya illinoinensis HOM05D004645 ORTHO05D005693 2.3e-06 56.6 110 69.1
Lsat_1_v5_gn_8_3080 Lactuca sativa HOM05D004645 ORTHO05D005693 2.3e-06 56.6 111 43.2
TAR629G2315 Trochodendron aralioides HOM05D004645 ORTHO05D005693 2.3e-06 56.6 111 75.7
Gohir.A02G114700 Gossypium hirsutum HOM05D004645 ORTHO05D005693 3.0e-06 56.2 117 67.5
MD01G1239600 Malus domestica HOM05D004645 ORTHO05D005693 3.9e-06 55.8 110 51.8
Carub.0006s1574 Capsella rubella HOM05D004645 ORTHO05D005693 5.1e-06 55.5 112 54.5
Manes.09G130100 Manihot esculenta HOM05D004645 ORTHO05D005693 6.7e-06 55.1 110 54.5


User provided reference genes

Program Settings