Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.9e-71 272.3 128 100.0
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 8.2e-51 203.8 122 72.1
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.9e-48 195.3 131 74.8
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 5.5e-39 164.5 88 79.5
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 7.2e-39 164.1 88 80.7
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.2e-38 163.3 87 80.5
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 1.6e-38 162.9 88 78.4
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 2.1e-38 162.5 88 78.4
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 3.6e-38 161.8 87 80.5
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 6.1e-38 161.0 86 77.9
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 7.9e-38 160.6 88 77.3
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.0e-37 160.2 84 79.8
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 1.4e-37 159.8 81 81.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 3.0e-37 158.7 99 69.7
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.0e-37 158.7 88 76.1
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 3.9e-37 158.3 81 80.2
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.9e-37 158.3 91 74.7
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 1.1e-36 156.8 106 66.0
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.1e-36 156.8 92 71.7
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 1.1e-36 156.8 88 73.9
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 2.5e-36 155.6 88 75.0
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 2.5e-36 155.6 90 76.7
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 3.3e-36 155.2 89 74.2
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 3.3e-36 155.2 88 78.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 3.3e-36 155.2 88 73.9
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 4.3e-36 154.8 84 77.4
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 5.7e-36 154.5 86 75.6
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 5.7e-36 154.5 84 79.8
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 5.7e-36 154.5 80 81.2
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.7e-35 152.9 84 75.0
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.7e-35 152.9 84 75.0
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.2e-35 152.5 85 78.8
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 2.2e-35 152.5 81 80.2
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 2.8e-35 152.1 95 70.5
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 2.8e-35 152.1 88 75.0
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 2.8e-35 152.1 82 81.7
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 3.7e-35 151.8 87 73.6
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 3.7e-35 151.8 81 80.2
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 3.7e-35 151.8 88 72.7
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 4.8e-35 151.4 81 75.3
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 4.8e-35 151.4 87 73.6
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 4.8e-35 151.4 86 76.7
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 4.8e-35 151.4 81 82.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 6.3e-35 151.0 87 73.6
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 8.2e-35 150.6 111 59.5
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 8.2e-35 150.6 85 74.1
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 1.1e-34 150.2 85 74.1
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 1.1e-34 150.2 97 66.0
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 1.1e-34 150.2 97 66.0
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.1e-34 150.2 93 71.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.1e-34 150.2 87 72.4
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 1.4e-34 149.8 81 77.8
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.8e-34 149.4 104 62.5
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.8e-34 149.4 77 81.8
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 2.4e-34 149.1 90 74.4
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 2.4e-34 149.1 85 76.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 2.4e-34 149.1 80 78.8
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 3.1e-34 148.7 88 72.7
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 6.9e-34 147.5 84 75.0
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 6.9e-34 147.5 85 70.6
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 6.9e-34 147.5 85 72.9
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 6.9e-34 147.5 85 72.9
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 6.9e-34 147.5 85 72.9
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.2e-33 146.7 79 77.2
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 1.2e-33 146.7 109 60.6
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.5e-33 146.4 81 75.3
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 2.0e-33 146.0 83 73.5
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 4.5e-33 144.8 84 78.6
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.7e-33 144.1 126 54.0
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 7.7e-33 144.1 89 71.9
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 7.7e-33 144.1 86 67.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.0e-32 143.7 97 68.0
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 2.2e-32 142.5 80 75.0
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 5.0e-32 141.4 73 82.2
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 3.2e-31 138.7 73 78.1
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 7.2e-31 137.5 86 67.4
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.2e-30 136.7 71 81.7
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.2e-30 136.7 81 70.4
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 1.6e-30 136.3 88 67.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 2.1e-30 136.0 83 65.1
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 2.7e-30 135.6 102 68.6
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.0e-29 133.7 96 58.3
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.4e-29 133.3 71 83.1
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 2.3e-29 132.5 106 56.6
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.9e-29 131.7 84 69.0
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 2.6e-28 129.0 69 81.2
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 7.4e-28 127.5 69 78.3
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 3.7e-27 125.2 72 75.0
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 4.8e-27 124.8 70 77.1
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 4.8e-27 124.8 69 78.3
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 2.4e-26 122.5 69 75.4
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 3.1e-26 122.1 68 77.9
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 5.3e-26 121.3 72 77.8
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 3.8e-24 115.2 71 64.8
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 6.5e-24 114.4 103 54.4
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.1e-22 109.4 73 65.8
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.0e-21 107.1 66 72.7
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 2.4e-18 95.9 64 56.2
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 4.5e-17 91.7 75 56.0
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 1.4e-13 80.1 49 69.4
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 3.2e-07 58.9 81 39.5
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.2e-06 57.0 37 62.2


User provided reference genes

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