Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0704500 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 1.5e-28 129.0 75 100.0
Os03g0288000 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 3.2e-15 84.7 75 78.7
Os12g0570700 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 1.2e-14 82.8 81 69.1
Os12g0571100 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 2.7e-14 81.6 77 61.0
Os12g0571000 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 8.0e-14 80.1 76 67.1
Os12g0568200 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 1.0e-13 79.7 80 60.0
Os12g0568500 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 6.8e-13 77.0 80 58.8
Os12g0567800 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 3.4e-12 74.7 79 59.5
Oeu049244.1 Olea europaea HOM05D002160 ORTHO05D002012 2.9e-08 61.6 76 48.7
Prupe.6G077900 Prunus persica HOM05D002160 ORTHO05D002012 5.0e-08 60.8 74 55.4
THA.LOC104827014 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 8.5e-08 60.1 58 55.2
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.1e-07 59.7 76 47.4
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 1.5e-07 59.3 74 54.1
Medtr7g061018 Medicago truncatula HOM05D002160 ORTHO05D002012 1.5e-07 59.3 56 53.6
Aa31LG3G1880 Aethionema arabicum HOM05D002160 ORTHO05D002012 1.9e-07 58.9 75 42.7
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 2.5e-07 58.5 56 55.4
Nitab4.5_0006455g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.2e-07 58.2 56 50.0
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 4.2e-07 57.8 74 54.1
THA.LOC104816271 Tarenaya hassleriana HOM05D002160 ORTHO05D002012 4.2e-07 57.8 57 49.1
arahy.Tifrunner.gnm1.ann1.N3YTXC Arachis hypogaea HOM05D002160 ORTHO05D002012 5.5e-07 57.4 75 58.7
BcaB03g11601 Brassica carinata HOM05D002160 ORTHO05D002012 5.5e-07 57.4 75 48.0
arahy.Tifrunner.gnm1.ann1.SS44WU Arachis hypogaea HOM05D002160 ORTHO05D002012 7.2e-07 57.0 76 59.2
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 7.2e-07 57.0 76 52.6
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 7.2e-07 57.0 73 39.7
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.2e-06 56.2 56 50.0
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.6e-06 55.8 56 50.0
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.6e-06 55.8 56 50.0
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 1.6e-06 55.8 77 49.4
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.6e-06 55.8 54 46.3
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.1e-06 55.5 73 42.5
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 2.7e-06 55.1 56 44.6
SalBow3G1804 Salvia bowleyana HOM05D002160 ORTHO05D002012 3.6e-06 54.7 75 49.3
Solyc09g010800.5.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 3.6e-06 54.7 57 49.1
Sopen09g005530 Solanum pennellii HOM05D002160 ORTHO05D002012 3.6e-06 54.7 57 49.1
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 4.7e-06 54.3 55 47.3
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 4.7e-06 54.3 55 47.3
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 4.7e-06 54.3 55 47.3
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 4.7e-06 54.3 56 48.2
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 4.7e-06 54.3 54 46.3
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 4.7e-06 54.3 73 50.7
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 6.1e-06 53.9 58 53.4
Cc06_g02650 Coffea canephora HOM05D002160 ORTHO05D002012 8.0e-06 53.5 56 44.6
unitig_744.g24657 Utricularia gibba HOM05D002160 ORTHO05D002012 8.0e-06 53.5 73 53.4
Zm00001eb335880 Zea mays HOM05D002160 ORTHO05D002012 8.0e-06 53.5 58 46.6


User provided reference genes

Program Settings