Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0689500 Oryza sativa ssp. japonica HOM05D004430 ORTHO05D005088 1.3e-236 822.8 458 100.0
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 5.7e-22 109.8 156 44.2
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 1.3e-21 108.6 181 40.9
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 1.0e-10 72.4 159 40.3
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 1.6e-08 65.1 169 35.5
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 3.6e-08 63.9 159 39.0
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 6.2e-08 63.2 190 34.2
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 8.0e-08 62.8 160 38.1
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 8.0e-08 62.8 160 38.1
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 1.8e-07 61.6 180 32.8
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 1.8e-07 61.6 170 35.3
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 2.3e-07 61.2 167 37.1
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 3.1e-07 60.8 180 32.8
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 3.1e-07 60.8 180 32.2
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 3.1e-07 60.8 160 37.5
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 3.1e-07 60.8 192 34.9
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 4.0e-07 60.5 151 35.1
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 4.0e-07 60.5 160 37.5
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 4.0e-07 60.5 156 37.8
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 4.0e-07 60.5 166 36.1
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 6.8e-07 59.7 161 37.3
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 8.9e-07 59.3 169 33.1
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 8.9e-07 59.3 161 36.0
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 1.5e-06 58.5 141 39.7
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 2.0e-06 58.2 136 39.7
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 2.0e-06 58.2 184 32.1
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 2.6e-06 57.8 171 34.5
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 3.4e-06 57.4 134 39.6
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 4.4e-06 57.0 174 32.8


User provided reference genes

Program Settings