Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0685600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 6.4e-224 780.4 390 100.0
Os05g0479700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 6.8e-157 557.8 367 75.2
Os11g0686400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 4.3e-151 538.5 366 74.0
Os11g0684100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.1e-143 513.8 367 71.9
Os11g0686900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 4.2e-90 335.9 385 49.1
Os10g0370100 Oryza sativa ssp. japonica HOM05D002542 ORTHO05D014245 5.7e-71 272.3 369 45.8
Os11g0462900 Oryza sativa ssp. japonica HOM05D000530 ORTHO05D014245 1.6e-65 254.2 324 44.4
Os11g0226400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D299577 5.2e-64 249.2 319 45.5
Os11g0225300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 6.3e-62 242.3 305 43.9
Zm00001eb164940 Zea mays HOM05D000011 ORTHO05D014245 2.5e-50 203.8 431 34.3
Os08g0396700 Oryza sativa ssp. japonica HOM05D000790 ORTHO05D000769 2.1e-41 174.1 284 39.8
Os11g0223201 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 7.3e-34 149.1 313 32.3
Os12g0281300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 2.2e-30 137.5 328 34.5
Os08g0202400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 2.1e-25 120.9 312 33.7
Os12g0237900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 1.1e-24 118.6 299 35.5
Os08g0205100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.1e-24 117.1 321 32.7
Os08g0205150 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 2.3e-19 100.9 324 30.2
Os08g0373000 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D014245 6.6e-19 99.4 317 29.7
Os08g0412100 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 6.6e-19 99.4 330 27.6
Os11g0606400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D030311 2.5e-18 97.4 248 29.8
Os08g0373400 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 4.7e-17 93.2 285 26.3
Os11g0249000 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.3e-16 90.9 287 26.1
Os12g0272800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.0e-15 87.8 315 29.2
Os11g0237900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.4e-15 87.0 318 29.9
Os11g0629600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.4e-15 87.0 263 33.1
Os12g0467300 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.3e-14 85.1 304 26.3
Os08g0176633 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D012693 8.4e-14 82.4 260 28.1
Os08g0387700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 8.4e-14 82.4 283 25.4
Zm00001eb174770 Zea mays HOM05D000011 ORTHO05D000157 7.1e-13 79.3 315 24.4
Zm00001eb115050 Zea mays HOM05D000011 ORTHO05D030311 2.7e-12 77.4 240 29.2
Glyma.08G317700 Glycine max HOM05D000011 ORTHO05D000157 6.0e-12 76.3 250 28.0
Os02g0301800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.0e-11 75.5 313 25.2
Glyma.08G319300 Glycine max HOM05D000011 ORTHO05D000157 1.7e-11 74.7 253 28.9
Medtr3g056380 Medicago truncatula HOM05D000011 ORTHO05D000157 3.0e-11 73.9 296 27.4
Glyma.08G317400 Glycine max HOM05D000011 ORTHO05D000157 5.1e-11 73.2 274 28.8
Os10g0133000 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D293626 8.6e-11 72.4 143 32.9
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.1e-10 72.0 304 23.4
Glyma.08G323200 Glycine max HOM05D000011 ORTHO05D000157 4.3e-10 70.1 251 27.9
TPR.G1966 Trifolium pratense HOM05D000011 ORTHO05D000157 4.3e-10 70.1 252 27.8
Zm00001eb042890 Zea mays HOM05D000011 ORTHO05D000157 4.3e-10 70.1 321 24.3
Glyma.18G190900 Glycine max HOM05D000011 ORTHO05D000157 5.6e-10 69.7 252 28.6
Os11g0237600 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.2e-09 68.6 256 28.1
TAR633G1439 Trochodendron aralioides HOM05D000011 ORTHO05D000157 1.2e-09 68.6 233 27.9
Oeu014573.1 Olea europaea HOM05D000011 ORTHO05D000157 2.8e-09 67.4 229 29.7
Os08g0372700 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.6e-09 67.0 230 27.8
Os12g0564800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 3.6e-09 67.0 233 29.2
Glyma.08G318000 Glycine max HOM05D000011 ORTHO05D000157 4.7e-09 66.6 222 28.8
Os08g0174800 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 1.8e-08 64.7 136 27.9
Prupe.1G043100 Prunus persica HOM05D000011 ORTHO05D000018 2.4e-08 64.3 283 25.1
TAR633G2128 Trochodendron aralioides HOM05D000011 ORTHO05D000157 2.4e-08 64.3 232 27.6
Medtr3g056410 Medicago truncatula HOM05D000011 ORTHO05D000157 5.2e-08 63.2 252 26.6
GSVIVG01028624001 Vitis vinifera HOM05D000011 ORTHO05D000157 6.9e-08 62.8 112 33.0
Zm00001eb136790 Zea mays HOM05D000011 ORTHO05D000157 6.9e-08 62.8 254 26.8
MBI14_g34255_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 8.9e-08 62.4 248 23.4
Os12g0565200 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 8.9e-08 62.4 240 28.8
Glyma.18G093600 Glycine max HOM05D000011 ORTHO05D000157 1.5e-07 61.6 256 25.8
QL08p002354 Quercus lobata HOM05D000011 ORTHO05D000157 2.6e-07 60.8 238 24.4
Medtr3g056360 Medicago truncatula HOM05D000011 ORTHO05D000157 3.4e-07 60.5 243 26.7
Os11g0524900 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 9.9e-07 58.9 262 26.0
CSS0001084 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 1.3e-06 58.5 141 33.3
Os11g0524601 Oryza sativa ssp. japonica HOM05D000862 ORTHO05D000943 1.3e-06 58.5 170 28.2
Aqoxy7G03859 Aquilegia oxysepala HOM05D000011 ORTHO05D000157 1.7e-06 58.2 259 24.7
Eucgr.D02631 Eucalyptus grandis HOM05D000011 ORTHO05D000157 2.2e-06 57.8 132 33.3
Os02g0272900 Oryza sativa ssp. japonica HOM05D000011 ORTHO05D000157 2.2e-06 57.8 115 32.2
Zm00001eb112770 Zea mays HOM05D000011 ORTHO05D000157 2.2e-06 57.8 335 24.2
Sabra12G0060200 Salix brachista HOM05D000011 ORTHO05D000157 3.8e-06 57.0 284 23.9
Zm00001eb271410 Zea mays HOM05D000011 ORTHO05D000157 4.9e-06 56.6 259 25.1
EL10As14g24079 Beta vulgaris HOM05D000011 ORTHO05D000157 8.4e-06 55.8 206 25.7
TAR633G1935 Trochodendron aralioides HOM05D000011 ORTHO05D000157 8.4e-06 55.8 245 24.1


User provided reference genes

Program Settings