Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0667400 Oryza sativa ssp. japonica HOM05D001091 ORTHO05D293907 1.5e-56 222.6 110 100.0
Os07g0160000 Oryza sativa ssp. japonica HOM05D001091 ORTHO05D001020 1.3e-25 119.8 171 45.6
Zm00001eb300350 Zea mays HOM05D001091 ORTHO05D001020 2.4e-22 109.0 171 43.3
Zm00001eb134530 Zea mays HOM05D001091 ORTHO05D001020 3.9e-09 65.1 168 31.5
SalBow6G2883 Salvia bowleyana HOM05D001091 ORTHO05D001020 5.1e-09 64.7 112 37.5
Dinv18857 Davidia involucrata HOM05D001091 ORTHO05D001020 2.1e-07 59.3 168 29.8
Cpa.g.sc104.6 Carica papaya HOM05D001091 ORTHO05D001020 2.8e-07 58.9 168 30.4
TWI31G0595 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 4.8e-07 58.2 168 27.4
Migut.D02381 Erythranthe guttata HOM05D001091 ORTHO05D001020 6.2e-07 57.8 167 28.1
Hund18804 Selenicereus undatus HOM05D001091 ORTHO05D001020 6.2e-07 57.8 134 32.8
Hma1.2p1_0101F.1_g049670 Hydrangea macrophylla HOM05D001091 ORTHO05D001020 8.1e-07 57.4 168 27.4
Lj2C949G1 Lonicera japonica HOM05D001091 ORTHO05D001020 1.1e-06 57.0 168 28.0
TWI79G0355 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 1.1e-06 57.0 168 27.4
VMungo1383G3391 Vigna mungo HOM05D001091 ORTHO05D001020 1.4e-06 56.6 168 28.0
Lsat_1_v5_gn_2_35221 Lactuca sativa HOM05D001091 ORTHO05D001020 1.8e-06 56.2 168 28.6
ATR0697G235 Amborella trichopoda HOM05D001091 ORTHO05D001020 2.4e-06 55.8 35 68.6
Nn6g34617 Nelumbo nucifera HOM05D001091 ORTHO05D001020 3.1e-06 55.5 168 26.8
Glyma.19G201100 Glycine max HOM05D001091 ORTHO05D001020 4.0e-06 55.1 168 29.2
MBI05_g36783_MAGBIO Magnolia biondii HOM05D001091 ORTHO05D001020 4.0e-06 55.1 168 29.2
Manes.09G043300 Manihot esculenta HOM05D001091 ORTHO05D001020 4.0e-06 55.1 168 28.6
CSS0022701 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 5.3e-06 54.7 139 33.1
AUR62001573 Chenopodium quinoa HOM05D001091 ORTHO05D001020 5.3e-06 54.7 168 28.0
HanXRQChr17g0561191 Helianthus annuus HOM05D001091 ORTHO05D001020 5.3e-06 54.7 168 27.4
MD03G1159600 Malus domestica HOM05D001091 ORTHO05D001020 5.3e-06 54.7 168 28.0
Potri.006G201100 Populus trichocarpa HOM05D001091 ORTHO05D001020 6.9e-06 54.3 168 28.0
GSVIVG01022582001 Vitis vinifera HOM05D001091 ORTHO05D001020 6.9e-06 54.3 168 28.0
AUR62020212 Chenopodium quinoa HOM05D001091 ORTHO05D001020 9.0e-06 53.9 168 28.0
Manes.11G103600 Manihot esculenta HOM05D001091 ORTHO05D001020 9.0e-06 53.9 168 26.8
PGR004G1296 Punica granatum HOM05D001091 ORTHO05D001020 9.0e-06 53.9 169 29.0


User provided reference genes

Program Settings