Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0630900 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D298901 5.2e-131 471.1 242 100.0
Os10g0423800 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.2e-13 81.3 105 51.4
Os11g0631100 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.5e-13 80.9 110 39.1
Os10g0423400 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.0e-13 80.5 111 45.0
Os04g0433000 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D299973 3.7e-12 76.3 223 35.0
Os02g0309200 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.1e-11 74.7 118 37.3
Os10g0425400 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.8e-11 73.9 107 41.1
Os11g0630700 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.4e-11 73.6 107 37.4
Zm00001eb049070 Zea mays HOM05D000563 ORTHO05D000536 2.4e-11 73.6 114 43.9
Os02g0310500 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.1e-11 73.2 100 38.0
Zm00001eb047910 Zea mays HOM05D000563 ORTHO05D000536 4.1e-11 72.8 125 40.0
Zm00001eb176820 Zea mays HOM05D000563 ORTHO05D000536 7.0e-11 72.0 136 36.0
Os10g0423300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.2e-10 71.2 85 48.2
Os10g0427300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.6e-10 70.9 95 46.3
Zm00001eb050730 Zea mays HOM05D000563 ORTHO05D000536 1.6e-10 70.9 114 45.6
Os10g0425900 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 4.5e-10 69.3 122 38.5
Os10g0425700 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 5.9e-10 68.9 103 40.8
Zm00001eb065610 Zea mays HOM05D000563 ORTHO05D000536 5.9e-10 68.9 102 43.1
Zm00001eb222950 Zea mays HOM05D000563 ORTHO05D000536 1.3e-09 67.8 102 38.2
Os02g0311150 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.8e-09 66.2 97 39.2
Os11g0622600 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 8.6e-09 65.1 104 38.5
Os10g0429300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 1.9e-08 63.9 96 37.5
Os02g0309500 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.5e-08 63.5 101 38.6
Os10g0423900 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 5.6e-08 62.4 54 51.9
Os10g0429600 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 6.1e-07 58.9 114 36.0
Zm00001eb047620 Zea mays HOM05D000563 ORTHO05D000536 2.3e-06 57.0 96 36.5
Os07g0297100 Oryza sativa ssp. japonica HOM05D037584 ORTHO05D000536 3.0e-06 56.6 98 34.7
SGA_v2.0_scaffold7G04131 Striga asiatica HOM05D000563 ORTHO05D402747 5.2e-06 55.8 60 38.3


User provided reference genes

Program Settings