Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0618850 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.3e-304 1048.9 533 100.0
Os11g0618700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.5e-146 523.9 351 76.9
Os11g0618500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 2.7e-132 476.5 357 68.6
Os10g0450400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.2e-40 170.2 372 34.7
MBI18_g03708_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.7e-28 130.6 310 31.0
Haze_06742 Corylus avellana HOM05D005161 ORTHO05D006816 2.1e-23 114.8 298 31.9
QL05p075077 Quercus lobata HOM05D005161 ORTHO05D006816 1.0e-22 112.5 297 30.3
TWI81G0680 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 2.3e-22 111.3 271 31.0
Cfa000273 Carpinus fangiana HOM05D005161 ORTHO05D006816 3.9e-22 110.5 286 30.4
MBI18_g03709_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.1e-21 109.0 306 27.5
MBI18_g32337_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.7e-20 104.0 290 27.9
MBI18_g01406_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 4.8e-20 103.6 216 31.0
Eucgr.D01504 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.4e-19 101.3 302 27.5
Eucgr.D01291 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-18 98.6 321 28.7
Eucgr.D01501 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.5e-18 97.1 304 27.3
Os11g0171100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.0e-17 95.9 309 29.8
Eucgr.D01493 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-17 95.5 286 26.9
Eucgr.D01507 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-17 95.1 302 28.1
Eucgr.L00328 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.0e-17 93.6 294 27.6
Eucgr.D00811 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.9e-16 91.7 363 26.4
Eucgr.L00330 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.9e-16 91.7 317 25.9
QL93p0073_0706 Quercus lobata HOM05D005161 ORTHO05D006816 1.9e-16 91.7 334 26.9
Eucgr.D01511 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.5e-16 91.3 342 27.2
TWI63G0153 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 2.5e-16 91.3 291 26.5
MBI18_g06807_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.2e-16 90.9 305 27.9
Eucgr.D00386 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.3e-16 89.4 295 29.8
Os03g0141800 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 2.1e-15 88.2 313 24.9
Eucgr.D00362 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.5e-15 87.4 304 26.6
Eucgr.D00375 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.1e-15 86.7 270 25.2
Eucgr.L00332 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.9e-15 86.3 288 26.4
Eucgr.D00394 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-14 85.5 298 26.5
MBI18_g42473_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.3e-14 85.5 341 24.0
Eucgr.D00383 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-14 85.1 259 25.5
Eucgr.D01495 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-14 85.1 320 27.5
Eucgr.D00810 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.3e-14 84.7 371 26.4
Eucgr.D01497 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.3e-14 84.7 333 24.9
Os11g0617700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 5.1e-14 83.6 336 28.3
Eucgr.D00377 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-13 82.0 272 27.9
QL04p088669 Quercus lobata HOM05D005161 ORTHO05D006816 1.5e-13 82.0 322 28.0
Eucgr.D00380 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.3e-13 80.9 324 26.2
Eucgr.D00388 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.3e-13 80.9 292 24.3
MBI18_g01412_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.7e-13 80.1 305 24.3
Eucgr.D01500 Eucalyptus grandis HOM05D005161 ORTHO05D006816 7.4e-13 79.7 347 27.7
Eucgr.D00396 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-12 79.0 331 26.9
TWI38G0750 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 1.6e-12 78.6 375 26.4
Zm00001eb352900 Zea mays HOM05D005161 ORTHO05D006816 2.8e-12 77.8 269 27.9
Cfa000271 Carpinus fangiana HOM05D005161 ORTHO05D006816 3.7e-12 77.4 279 29.4
Eucgr.D00804 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.8e-12 77.0 260 28.5
MBI18_g01408_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.1e-11 75.9 198 30.3
TWI38G1862 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 1.1e-11 75.9 311 26.4
Eucgr.D01492 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-11 75.5 281 25.6
Eucgr.D00381 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.8e-11 75.1 319 22.9
Eucgr.D01108 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.1e-11 74.3 294 25.5
Os02g0297200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 9.0e-11 72.8 335 24.2
Eucgr.D00400 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-10 72.4 286 23.8
Eucgr.D00403 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-10 72.4 281 24.6
COL.COLO4_31730 Corchorus olitorius HOM05D005161 ORTHO05D006816 2.0e-10 71.6 275 27.6
Eucgr.D01490 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-10 71.2 297 25.9
Eucgr.D00371 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-09 68.9 315 22.9
Eucgr.D01245 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-09 68.9 283 22.3
Zm00001eb341380 Zea mays HOM05D005161 ORTHO05D006816 1.3e-09 68.9 248 30.2
Eucgr.L00335 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.9e-09 67.8 307 25.7
Eucgr.D00117 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.0e-09 67.0 250 25.6
MBI18_g25250_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.1e-08 65.9 332 24.7
Eucgr.D00365 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-08 65.5 351 22.8
MBI18_g12380_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.9e-08 65.1 152 28.9
MBI18_g18530_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 9.4e-08 62.8 332 24.7
Eucgr.D01109 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-07 62.4 292 25.0
Os06g0117500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D299793 4.6e-07 60.5 271 24.4
Eucgr.D00385 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.1e-07 60.1 341 22.9
Eucgr.D00361 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.4e-06 58.9 270 24.1
Zm00001eb299590 Zea mays HOM05D005161 ORTHO05D006816 3.9e-06 57.4 311 24.8
Zm00001eb440760 Zea mays HOM05D005161 ORTHO05D006816 3.9e-06 57.4 311 24.8
Os06g0124300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 6.7e-06 56.6 238 25.6


User provided reference genes

Program Settings