Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0618800 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.9e-99 364.4 175 100.0
Os11g0618700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 5.9e-44 181.4 237 43.9
Os11g0619500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 7.8e-20 101.3 232 30.6
Os03g0142200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.6e-12 77.0 213 26.3
Zm00001eb369570 Zea mays HOM05D005161 ORTHO05D006816 7.8e-12 74.7 156 31.4
Os10g0450400 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.0e-11 74.3 73 45.2
Eucgr.D00368 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.1e-10 70.9 164 28.7
COL.COLO4_31730 Corchorus olitorius HOM05D005161 ORTHO05D006816 1.9e-10 70.1 185 28.6
MBI18_g42473_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.9e-10 70.1 223 26.9
Eucgr.L00328 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.5e-10 69.7 88 38.6
Eucgr.D00807 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.3e-10 68.9 211 25.6
Eucgr.D01291 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.3e-10 68.9 210 26.7
Eucgr.D01495 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.6e-10 68.6 90 36.7
Eucgr.D01507 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.6e-10 67.8 65 46.2
Eucgr.D01501 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.1e-09 66.6 56 48.2
Eucgr.D01493 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.8e-09 66.2 90 36.7
QL05p075077 Quercus lobata HOM05D005161 ORTHO05D006816 3.6e-09 65.9 86 36.0
Eucgr.D01500 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.7e-09 65.5 65 46.2
Eucgr.D01505 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.7e-09 65.5 63 42.9
Eucgr.L00330 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.7e-09 65.5 93 35.5
Haze_06742 Corylus avellana HOM05D005161 ORTHO05D006816 6.2e-09 65.1 177 27.7
Eucgr.D00808 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.1e-09 64.7 201 26.4
Cfa000273 Carpinus fangiana HOM05D005161 ORTHO05D006816 1.1e-08 64.3 175 26.9
MBI18_g01409_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 1.4e-08 63.9 204 25.5
Os01g0373500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 1.8e-08 63.5 47 53.2
Eucgr.D00403 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.4e-08 63.2 94 30.9
Eucgr.D00371 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.0e-08 62.4 201 23.4
Eucgr.D01492 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.0e-08 62.4 66 42.4
Eucgr.L00332 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.0e-08 62.4 66 42.4
MBI18_g32336_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 4.0e-08 62.4 66 40.9
Os05g0508500 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.0e-08 62.4 66 42.4
MBI18_g03708_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.2e-08 62.0 61 41.0
Zm00001eb341380 Zea mays HOM05D005161 ORTHO05D006816 5.2e-08 62.0 48 50.0
Eucgr.D00400 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.8e-08 61.6 202 23.8
Eucgr.D00809 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.8e-08 61.6 52 44.2
Eucgr.D00810 Eucalyptus grandis HOM05D005161 ORTHO05D006816 6.8e-08 61.6 64 39.1
MBI18_g18530_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 6.8e-08 61.6 77 40.3
Eucgr.D00362 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.9e-08 61.2 55 41.8
MBI18_g25250_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 8.9e-08 61.2 75 41.3
Os07g0116300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 8.9e-08 61.2 161 26.1
Eucgr.D00357 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.2e-07 60.8 80 33.8
QL05p075122 Quercus lobata HOM05D005161 ORTHO05D006816 1.2e-07 60.8 72 40.3
Zm00001eb118070 Zea mays HOM05D005161 ORTHO05D006816 1.2e-07 60.8 173 24.9
Eucgr.D00377 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-07 60.5 63 42.9
Eucgr.D00394 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-07 60.5 55 41.8
Eucgr.D00806 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-07 60.5 50 46.0
Eucgr.D00811 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.5e-07 60.5 59 44.1
Eucgr.D00389 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.0e-07 60.1 54 40.7
Eucgr.D00366 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-07 59.7 51 43.1
Eucgr.D00386 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.6e-07 59.7 50 44.0
MBI18_g06807_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 2.6e-07 59.7 47 53.2
QL04p088669 Quercus lobata HOM05D005161 ORTHO05D006816 2.6e-07 59.7 82 40.2
Zm00001eb115180 Zea mays HOM05D005161 ORTHO05D006816 2.6e-07 59.7 47 51.1
Eucgr.D00393 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.4e-07 59.3 55 38.2
MBI18_g01412_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 3.4e-07 59.3 87 36.8
TWI81G0680 Tripterygium wilfordii HOM05D005161 ORTHO05D006816 3.4e-07 59.3 212 25.9
Eucgr.D00385 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.4e-07 58.9 51 43.1
Os03g0141800 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.4e-07 58.9 74 37.8
Zm00001eb298730 Zea mays HOM05D005161 ORTHO05D006816 4.4e-07 58.9 63 42.9
Eucgr.D01478 Eucalyptus grandis HOM05D005161 ORTHO05D006816 5.8e-07 58.5 50 44.0
MBI18_g12380_MAGBIO Magnolia biondii HOM05D005161 ORTHO05D006816 5.8e-07 58.5 49 49.0
Os01g0333600 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D037202 5.8e-07 58.5 47 42.6
Os06g0119100 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 5.8e-07 58.5 76 40.8
Eucgr.D01490 Eucalyptus grandis HOM05D005161 ORTHO05D006816 9.9e-07 57.8 50 44.0
Eucgr.D00364 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-06 57.4 50 42.0
Eucgr.D00380 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-06 57.4 64 37.5
Eucgr.D00381 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.3e-06 57.4 50 42.0
Eucgr.D00375 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-06 57.0 53 41.5
Eucgr.L02157 Eucalyptus grandis HOM05D005161 ORTHO05D006816 1.7e-06 57.0 65 35.4
Cfa000271 Carpinus fangiana HOM05D005161 ORTHO05D006816 2.2e-06 56.6 68 39.7
Eucgr.D00360 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.2e-06 56.6 56 39.3
Manes.16G012100 Manihot esculenta HOM05D005161 ORTHO05D006816 2.2e-06 56.6 170 25.3
QL93p0073_0706 Quercus lobata HOM05D005161 ORTHO05D006816 2.2e-06 56.6 178 26.4
Eucgr.D01245 Eucalyptus grandis HOM05D005161 ORTHO05D006816 2.9e-06 56.2 52 42.3
AUR62044086 Chenopodium quinoa HOM05D000432 ORTHO05D000320 3.8e-06 55.8 77 37.7
Eucgr.D01108 Eucalyptus grandis HOM05D005161 ORTHO05D006816 3.8e-06 55.8 72 37.5
Eucgr.D00383 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.9e-06 55.5 53 39.6
Eucgr.D00397 Eucalyptus grandis HOM05D005161 ORTHO05D006816 4.9e-06 55.5 65 36.9
Os07g0115700 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D006816 4.9e-06 55.5 47 44.7
Os06g0122200 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 6.4e-06 55.1 72 37.5
Eucgr.D00117 Eucalyptus grandis HOM05D005161 ORTHO05D006816 8.4e-06 54.7 50 38.0
Os06g0119300 Oryza sativa ssp. japonica HOM05D005161 ORTHO05D020953 8.4e-06 54.7 56 37.5


User provided reference genes

Program Settings