Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0598800 Oryza sativa ssp. japonica HOM05D026319 ORTHO05D295792 0.0e+00 1902.1 953 100.0
Os11g0549605 Oryza sativa ssp. japonica HOM05D026319 ORTHO05D301608 3.9e-41 174.5 962 23.0
Os11g0549610 Oryza sativa ssp. japonica HOM05D026319 ORTHO05D295653 4.7e-26 124.4 340 32.1
Os07g0514400 Oryza sativa ssp. japonica HOM05D026319 ORTHO05D294234 7.5e-24 117.1 531 27.3
Os11g0599101 Oryza sativa ssp. japonica HOM05D016364 ORTHO05D018060 6.3e-23 114.0 348 27.0
CSS0014551 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.3e-20 106.3 349 24.6
CSS0045618 Camellia sinensis var. sinensis HOM05D001961 ORTHO05D002286 1.3e-20 106.3 349 24.6
QL10p014874 Quercus lobata HOM05D001961 ORTHO05D002286 2.9e-20 105.1 354 24.6
CANSAT80G1878 Cannabis sativa HOM05D001961 ORTHO05D002286 3.8e-20 104.8 392 24.5
Os03g0165600 Oryza sativa ssp. japonica HOM05D001961 ORTHO05D002286 8.6e-20 103.6 338 26.0
Cc04_g15870 Coffea canephora HOM05D001961 ORTHO05D002286 4.2e-19 101.3 350 24.6
Zm00001eb005070 Zea mays HOM05D001961 ORTHO05D002286 4.2e-19 101.3 339 26.8
Hma1.2p1_0002F.1_g003400 Hydrangea macrophylla HOM05D001961 ORTHO05D002286 5.5e-19 100.9 469 23.0
Sopen03g032420 Solanum pennellii HOM05D001961 ORTHO05D002286 1.2e-18 99.8 343 25.1
COL.COLO4_35465 Corchorus olitorius HOM05D001961 ORTHO05D002286 1.6e-18 99.4 372 24.5
MSTRG.11404 Avicennia marina HOM05D001961 ORTHO05D002286 2.8e-18 98.6 341 23.5
Solyc03g113370.3 Solanum lycopersicum HOM05D001961 ORTHO05D002286 2.8e-18 98.6 348 24.7
PGR083G2262 Punica granatum HOM05D001961 ORTHO05D002286 3.6e-18 98.2 381 25.2
Sc04g0002330 Simmondsia chinensis HOM05D001961 ORTHO05D002286 1.4e-17 96.3 372 22.8
Eucgr.B00398 Eucalyptus grandis HOM05D001961 ORTHO05D002286 5.2e-17 94.4 375 26.1
Lj9C457G12 Lonicera japonica HOM05D001961 ORTHO05D002286 1.2e-16 93.2 481 22.9
Sabra12G0051300 Salix brachista HOM05D001961 ORTHO05D002286 6.3e-15 87.4 347 23.3
PGSC0003DMG400013181 Solanum tuberosum HOM05D001961 ORTHO05D002286 6.3e-15 87.4 342 24.6
Aa31LG11G1000 Aethionema arabicum HOM05D001961 ORTHO05D002286 8.3e-15 87.0 348 22.7
Dinv33704 Davidia involucrata HOM05D001961 ORTHO05D002286 8.3e-15 87.0 518 21.6
Nitab4.5_0004478g0040 Nicotiana tabacum HOM05D001961 ORTHO05D002286 1.4e-14 86.3 381 23.1
THA.LOC104821450 Tarenaya hassleriana HOM05D001961 ORTHO05D002286 1.4e-14 86.3 371 23.2
Nitab4.5_0000909g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 2.7e-13 82.0 390 23.1
Os11g0599000 Oryza sativa ssp. japonica HOM05D016364 ORTHO05D018060 7.8e-13 80.5 168 31.0
Dinv33701 Davidia involucrata HOM05D001961 ORTHO05D002286 1.0e-12 80.1 529 21.2
Aa31LG2G2310 Aethionema arabicum HOM05D003941 ORTHO05D009447 3.3e-11 75.1 241 24.5
Oeu006173.1 Olea europaea HOM05D001961 ORTHO05D002286 3.3e-11 75.1 360 21.1
Carub.0002s1065 Capsella rubella HOM05D003941 ORTHO05D009447 1.0e-09 70.1 492 22.0
Peaxi162Scf00009g00524 Petunia axillaris HOM05D001961 ORTHO05D002286 1.2e-08 66.6 321 22.4
unitig_744.g24389 Utricularia gibba HOM05D001961 ORTHO05D002286 5.8e-08 64.3 391 21.5
THA.LOC104821865 Tarenaya hassleriana HOM05D003941 ORTHO05D009447 7.5e-08 63.9 511 20.4
Dinv33730 Davidia involucrata HOM05D001961 ORTHO05D002286 4.9e-07 61.2 281 22.4
THA.LOC104805708 Tarenaya hassleriana HOM05D003941 ORTHO05D002286 6.4e-07 60.8 307 22.8
MBI01_g01232_MAGBIO Magnolia biondii HOM05D001961 ORTHO05D002286 2.4e-06 58.9 256 22.7
AT1G65110 Arabidopsis thaliana HOM05D003941 ORTHO05D009447 4.1e-06 58.2 283 24.7
Nitab4.5_0007282g0070 Nicotiana tabacum HOM05D001961 ORTHO05D002286 5.4e-06 57.8 203 24.1
Aqoxy4G02909 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 7.0e-06 57.4 152 27.0


User provided reference genes

Program Settings