Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0594500 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.4e-258 894.0 434 100.0
Os11g0594600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 2.6e-72 276.9 427 40.7
Zm00001eb167580 Zea mays HOM05D011330 ORTHO05D013903 6.1e-66 255.8 401 39.4
Os11g0595100 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 9.8e-48 195.3 427 33.5
Os04g0317300 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 3.3e-43 180.3 426 34.3
Os04g0329500 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.3e-43 179.9 424 34.7
Os04g0316800 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.1e-35 155.2 426 32.2
Zm00001eb114820 Zea mays HOM05D011330 ORTHO05D013903 2.1e-29 134.4 373 30.0
Os08g0293200 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 5.8e-24 116.3 239 38.1
Os06g0148600 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D000074 6.4e-23 112.8 451 28.4
Os12g0585300 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 7.3e-19 99.4 417 29.3
Os02g0159800 Oryza sativa ssp. japonica HOM05D023903 ORTHO05D030342 1.3e-18 98.6 395 29.6
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.5e-16 90.1 437 26.3
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.9e-15 86.7 435 25.3
Os01g0673300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 9.3e-14 82.4 385 26.8
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.9e-11 74.7 439 23.5
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 9.6e-11 72.4 419 23.4
Aqoxy7G03491 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.3e-10 72.0 446 23.3
Os07g0499900 Oryza sativa ssp. japonica HOM05D033386 ORTHO05D037243 2.1e-10 71.2 497 22.5
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.2e-10 69.7 332 24.7
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-09 68.9 421 24.5
Aqoxy3G01893 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-09 68.2 192 27.6
Os06g0148700 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.8e-09 68.2 347 25.6
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-09 67.8 422 24.6
Os06g0148900 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 4.0e-09 67.0 439 25.7
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-08 65.1 321 26.2
Aqoxy7G03493 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.0e-08 64.7 339 24.8
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.0e-08 64.7 330 22.7
TAR636G0632 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-08 64.3 321 25.5
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.0e-07 62.4 241 26.6
FvH4_3g27200 Fragaria vesca HOM05D008995 ORTHO05D000074 1.0e-07 62.4 311 24.4
FAN16G1355 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.0e-07 62.4 311 24.4
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 1.7e-07 61.6 311 24.4
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.2e-07 61.2 403 24.8
TAR636G0252 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.2e-07 61.2 321 24.9
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.9e-07 60.8 225 27.1
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.9e-07 60.8 334 21.9
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-07 60.5 314 23.9
Os01g0530500 Oryza sativa ssp. japonica HOM05D023903 ORTHO05D030342 3.8e-07 60.5 307 23.5
Aqoxy5G01074 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.5e-07 59.7 286 24.8
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.5e-07 59.7 232 26.7
FAN25G1763 Fragaria x ananassa HOM05D008995 ORTHO05D000074 8.4e-07 59.3 221 26.2
CAN.G137.43 Capsicum annuum HOM05D000151 ORTHO05D000074 2.5e-06 57.8 253 24.9
RcHm_v2.0_Chr7g0223801 Rosa chinensis HOM05D000151 ORTHO05D000074 3.2e-06 57.4 175 23.4
Dinv43794 Davidia involucrata HOM05D000151 ORTHO05D000074 5.5e-06 56.6 346 23.4
VMungo1215G2432 Vigna mungo HOM05D008995 ORTHO05D000074 7.1e-06 56.2 148 29.1
Aqoxy7G01060 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.3e-06 55.8 134 32.1


User provided reference genes

Program Settings